RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C WSS1P38838 269 aa5.43□□□□□ -1.54
PUP2YGR253C NUP42P49686 430 aaKnown RBP5.43□□□□□ -1.54
PUP2YGR253C MSO1P53604 210 aaKnown RBP5.43□□□□□ -1.54
PUP2YGR253C VPS28Q02767 242 aa5.43□□□□□ -1.54
PUP2YGR253C YOR011W-AQ3E807 68 aa5.43□□□□□ -1.54
PUP2YGR253C CYC1P00044 109 aaPredicted RBP5.42□□□□□ -1.54
PUP2YGR253C GPM1P00950 247 aaKnown RBP5.42□□□□□ -1.54
PUP2YGR253C SNF11P38956 169 aa5.42□□□□□ -1.54
PUP2YGR253C RTS2P40962 232 aa5.42□□□□□ -1.54
PUP2YGR253C FRQ1Q06389 190 aa5.42□□□□□ -1.54
PUP2YGR253C NGL1Q08213 363 aaKnown RBP5.42□□□□□ -1.54
PUP2YGR253C LDS2Q08218 356 aa5.42□□□□□ -1.54
PUP2YGR253C RDI1Q12434 202 aa5.42□□□□□ -1.54
PUP2YGR253C POP5P28005 173 aa5.41□□□□□ -1.54
PUP2YGR253C MRP17P28778 131 aa5.41□□□□□ -1.54
PUP2YGR253C AVT5P38176 459 aa5.41□□□□□ -1.54
PUP2YGR253C BDH1P39714 382 aa5.41□□□□□ -1.54
PUP2YGR253C YJL027CP47063 138 aaPredicted RBP5.41□□□□□ -1.54
PUP2YGR253C CWC23P52868 283 aaPredicted RBP5.41□□□□□ -1.54
PUP2YGR253C NIF3P53081 288 aa5.41□□□□□ -1.54
PUP2YGR253C YGR018CP53211 109 aa5.41□□□□□ -1.54
PUP2YGR253C LSM7P53905 115 aaKnown RBP5.41□□□□□ -1.54
PUP2YGR253C YCT1Q12235 531 aa5.41□□□□□ -1.54
PUP2YGR253C PRE9P23638 258 aaKnown RBP5.4□□□□□ -1.54
PUP2YGR253C YCR022CP25620 114 aa5.4□□□□□ -1.54
PUP2YGR253C SIP1P32578 815 aa5.4□□□□□ -1.54
PUP2YGR253C IPI1P38803 334 aaPredicted RBP5.4□□□□□ -1.54
PUP2YGR253C RAI1P53063 387 aaKnown RBP5.4□□□□□ -1.54
PUP2YGR253C YLR224WQ05947 369 aa5.4□□□□□ -1.54
PUP2YGR253C DCS1Q06151 350 aa5.4□□□□□ -1.54
PUP2YGR253C YPS3Q12303 508 aa5.4□□□□□ -1.54
PUP2YGR253C YKL162CP36052 402 aa5.39□□□□□ -1.55
PUP2YGR253C GPI2P46961 280 aa5.39□□□□□ -1.55
PUP2YGR253C YIP3P53633 176 aa5.39□□□□□ -1.55
PUP2YGR253C HCH1P53834 153 aa5.39□□□□□ -1.55
PUP2YGR253C STP4Q07351 490 aa5.39□□□□□ -1.55
PUP2YGR253C IZH3Q07959 543 aa5.39□□□□□ -1.55
PUP2YGR253C POC4Q12245 148 aaPredicted RBP5.39□□□□□ -1.55
PUP2YGR253C YCR016WP25617 290 aaKnown RBP5.38□□□□□ -1.55
PUP2YGR253C UPS2P35200 230 aa5.38□□□□□ -1.55
PUP2YGR253C CMC1P36064 111 aa5.38□□□□□ -1.55
PUP2YGR253C HXT14P42833 540 aa5.38□□□□□ -1.55
PUP2YGR253C TPN1P53099 579 aa5.38□□□□□ -1.55
PUP2YGR253C LST7P53237 242 aa5.38□□□□□ -1.55
PUP2YGR253C GIS2P53849 153 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55 RIP-Chip
PUP2YGR253C HAL1Q01766 294 aa5.38□□□□□ -1.55
PUP2YGR253C POS5Q06892 414 aa5.38□□□□□ -1.55
PUP2YGR253C PRM7Q12459 698 aa5.38□□□□□ -1.55
PUP2YGR253C TPI1P00942 248 aaKnown RBP5.37□□□□□ -1.55
PUP2YGR253C PIS1P06197 220 aaKnown RBP5.37□□□□□ -1.55
PUP2YGR253C YHR213WP0CI67 198 aa5.37□□□□□ -1.55
PUP2YGR253C SEC22P22214 214 aa5.37□□□□□ -1.55
PUP2YGR253C SPT14P32363 452 aa5.37□□□□□ -1.55
PUP2YGR253C CSH1P38287 376 aa5.37□□□□□ -1.55
PUP2YGR253C RRF1P38771 230 aa5.37□□□□□ -1.55
PUP2YGR253C YGR025WP53216 100 aa5.37□□□□□ -1.55
PUP2YGR253C TRM13Q12383 476 aa5.37□□□□□ -1.55
PUP2YGR253C RPN13O13563 156 aa5.36□□□□□ -1.55
PUP2YGR253C FCY2P17064 533 aa5.36□□□□□ -1.55
PUP2YGR253C ERS1P17261 260 aa5.36□□□□□ -1.55
PUP2YGR253C SUA5P32579 426 aa5.36□□□□□ -1.55
PUP2YGR253C GLE2P40066 365 aa5.36□□□□□ -1.55
PUP2YGR253C YIR035CP40579 254 aa5.36□□□□□ -1.55
PUP2YGR253C GPG1P53130 126 aa5.36□□□□□ -1.55
PUP2YGR253C YMR244WQ04018 355 aa5.36□□□□□ -1.55
PUP2YGR253C SDH7Q04401 133 aa5.36□□□□□ -1.55
PUP2YGR253C PHO92Q06390 306 aa5.36□□□□□ -1.55
PUP2YGR253C YPL264CQ08980 353 aa5.36□□□□□ -1.55
PUP2YGR253C TFB5Q3E7C1 72 aaPredicted RBP5.36□□□□□ -1.55
PUP2YGR253C CDC7P06243 507 aa5.35□□□□□ -1.55
PUP2YGR253C FPR2P32472 135 aa5.35□□□□□ -1.55
PUP2YGR253C LCB3P47013 409 aa5.35□□□□□ -1.55
PUP2YGR253C YIF1P53845 314 aaKnown RBP5.35□□□□□ -1.55
PUP2YGR253C USV1Q12132 391 aa5.35□□□□□ -1.55
PUP2YGR253C AIM45Q12480 344 aaKnown RBP5.35□□□□□ -1.55
PUP2YGR253C SPS2P08459 502 aa5.34□□□□□ -1.55
PUP2YGR253C ZRC1P20107 442 aa5.34□□□□□ -1.55
PUP2YGR253C VMA22P38784 181 aa5.34□□□□□ -1.55
PUP2YGR253C BOL3P39724 118 aa5.34□□□□□ -1.55
PUP2YGR253C YER135CP40082 130 aa5.34□□□□□ -1.55
PUP2YGR253C UBC7Q02159 165 aa5.34□□□□□ -1.55
PUP2YGR253C YMR090WQ04304 227 aaKnown RBP5.34□□□□□ -1.55
PUP2YGR253C YPL162CQ12042 273 aa5.34□□□□□ -1.55
PUP2YGR253C YNL146C-AQ3E7Z1 64 aa5.34□□□□□ -1.55
PUP2YGR253C RPS25BP0C0T4 108 aaKnown RBP5.33□□□□□ -1.56
PUP2YGR253C NHP6BP11633 99 aaKnown RBP5.33□□□□□ -1.56
PUP2YGR253C GAT4P40569 121 aa5.33□□□□□ -1.56
PUP2YGR253C YJR015WP47090 510 aa5.33□□□□□ -1.56
PUP2YGR253C PDR17P53844 350 aa5.33□□□□□ -1.56
PUP2YGR253C ODC1Q03028 310 aa5.33□□□□□ -1.56
PUP2YGR253C SGF11Q03067 99 aa5.33□□□□□ -1.56
PUP2YGR253C MRPS8Q03799 155 aa5.33□□□□□ -1.56
PUP2YGR253C RPS25AQ3E792 108 aaPredicted RBP5.33□□□□□ -1.56
PUP2YGR253C COA2Q3E823 68 aa5.33□□□□□ -1.56
PUP2YGR253C DFR1P07807 211 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
PUP2YGR253C YCR001WP25347 104 aa5.32□□□□□ -1.56
PUP2YGR253C ECM25P32525 599 aa5.32□□□□□ -1.56
PUP2YGR253C UTP11P34247 250 aaPredicted RBP5.32□□□□□ -1.56
PUP2YGR253C MRPL3P36516 390 aa5.32□□□□□ -1.56
PUP2YGR253C MIG3P39943 394 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms