RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	STF2	P16965	84 aa		0.92	□□□□□ -2.26
VMA7	YGR020C	UGX2	P32772	223 aa		0.92	□□□□□ -2.26
VMA7	YGR020C	YHL037C	P38733	133 aa		0.92	□□□□□ -2.26
VMA7	YGR020C	YGL235W	P53071	178 aa		0.92	□□□□□ -2.26
VMA7	YGR020C	PIR1	Q03178	341 aa		0.92	□□□□□ -2.26
VMA7	YGR020C	YOR015W	Q12169	119 aa		0.92	□□□□□ -2.26
VMA7	YGR020C	FAS1	P07149	2051 aa	Known RBP	0.92	□□□□□ -2.26
VMA7	YGR020C	NSG1	P38837	291 aa		0.91	□□□□□ -2.26
VMA7	YGR020C	NSA2	P40078	261 aa	Known RBP	0.91	□□□□□ -2.26
VMA7	YGR020C	YFL051C	P43552	160 aa		0.91	□□□□□ -2.26
VMA7	YGR020C	CWC21	Q03375	135 aa	Known RBP	0.91	□□□□□ -2.26
VMA7	YGR020C	DAS2	Q12084	232 aa		0.91	□□□□□ -2.26
VMA7	YGR020C	ATP20	Q12233	115 aa		0.91	□□□□□ -2.26
VMA7	YGR020C	YLR412C-A	Q3E742	68 aa		0.91	□□□□□ -2.26
VMA7	YGR020C	YPR014C	Q6B0W2	109 aa		0.91	□□□□□ -2.26
VMA7	YGR020C	MPM1	P40364	252 aa		0.9	□□□□□ -2.27
VMA7	YGR020C	SBH1	P52870	82 aa		0.9	□□□□□ -2.27
VMA7	YGR020C	SBH2	P52871	88 aa		0.9	□□□□□ -2.27
VMA7	YGR020C	CGR1	P53188	120 aa		0.9	□□□□□ -2.27
VMA7	YGR020C	FYV12	Q08559	129 aa		0.9	□□□□□ -2.27
VMA7	YGR020C	YOR342C	Q12182	319 aa		0.9	□□□□□ -2.27
VMA7	YGR020C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.9	□□□□□ -2.27
VMA7	YGR020C	CHD1	P32657	1468 aa		0.89	□□□□□ -2.27
VMA7	YGR020C	TAH1	P25638	111 aa	Predicted RBP	0.89	□□□□□ -2.27
VMA7	YGR020C	ADE1	P27616	306 aa		0.89	□□□□□ -2.27
VMA7	YGR020C	YBL010C	P32788	280 aa		0.89	□□□□□ -2.27
VMA7	YGR020C	PGA1	P53896	198 aa		0.89	□□□□□ -2.27
VMA7	YGR020C	NRK1	P53915	240 aa		0.89	□□□□□ -2.27
VMA7	YGR020C	DGK1	Q12382	290 aa		0.89	□□□□□ -2.27
VMA7	YGR020C	JIP3	O13555	125 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	TRX3	P25372	127 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	ETR1	P38071	380 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	YHP1	Q04116	353 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	FIT1	Q04433	528 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	UPS1	Q05776	175 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	SAC3	P46674	1301 aa		0.88	□□□□□ -2.27
VMA7	YGR020C	RRT1	P38192	103 aa		0.87	□□□□□ -2.27
VMA7	YGR020C	NSE4	P43124	402 aa		0.87	□□□□□ -2.27
VMA7	YGR020C	GIM3	P53900	129 aa		0.87	□□□□□ -2.27
VMA7	YGR020C	AIM34	Q03673	198 aa		0.87	□□□□□ -2.27
VMA7	YGR020C	ATG38	Q05789	226 aa	Known RBP	0.87	□□□□□ -2.27
VMA7	YGR020C	NOC4	Q06512	552 aa	Predicted RBP	0.87	□□□□□ -2.27
VMA7	YGR020C	APA2	P22108	325 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	RAD51	P25454	400 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	RME1	P32338	300 aa	Known RBP	0.86	□□□□□ -2.27
VMA7	YGR020C	CAF4	P36130	643 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	YIL102C	P40488	101 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	GRX5	Q02784	150 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	ELP6	Q04868	273 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	YMR030W-A	Q3E760	96 aa		0.86	□□□□□ -2.27
VMA7	YGR020C	FMP49	A0A023PZB3	126 aa		0.85	□□□□□ -2.27
VMA7	YGR020C	DML1	Q03652	475 aa		0.85	□□□□□ -2.27
VMA7	YGR020C	GAL83	Q04739	417 aa		0.85	□□□□□ -2.27
VMA7	YGR020C	RAD9	P14737	1309 aa		0.85	□□□□□ -2.27
VMA7	YGR020C	YAR064W	P39563	99 aa		0.84	□□□□□ -2.27
VMA7	YGR020C	DCV1	P43595	202 aa		0.84	□□□□□ -2.27
VMA7	YGR020C	ATG41	Q12048	136 aa		0.84	□□□□□ -2.27
VMA7	YGR020C	CCW12	Q12127	133 aa		0.84	□□□□□ -2.27
VMA7	YGR020C	MPD1	Q12404	318 aa	Known RBP	0.84	□□□□□ -2.27
VMA7	YGR020C	QCR6	P00127	147 aa		0.83	□□□□□ -2.28
VMA7	YGR020C	MAK31	P23059	88 aa		0.83	□□□□□ -2.28
VMA7	YGR020C	SMD2	Q06217	110 aa	Known RBP	0.83	□□□□□ -2.28
VMA7	YGR020C	GRE1	Q08969	168 aa		0.83	□□□□□ -2.28
VMA7	YGR020C	AHC2	P25649	128 aa		0.82	□□□□□ -2.28
VMA7	YGR020C	CCS1	P40202	249 aa	Known RBP	0.82	□□□□□ -2.28
VMA7	YGR020C	FMP32	P43557	207 aa		0.82	□□□□□ -2.28
VMA7	YGR020C	HHT1	P61830	136 aa		0.82	□□□□□ -2.28
VMA7	YGR020C	GRX8	Q05926	109 aa		0.82	□□□□□ -2.28
VMA7	YGR020C	HSP30	P25619	332 aa		0.81	□□□□□ -2.28
VMA7	YGR020C	ARC19	P33204	171 aa	Known RBP	0.81	□□□□□ -2.28
VMA7	YGR020C	SHH4	Q06236	168 aa		0.81	□□□□□ -2.28
VMA7	YGR020C	ATP7	P30902	174 aa		0.8	□□□□□ -2.28
VMA7	YGR020C	SHG1	P38337	142 aa		0.8	□□□□□ -2.28
VMA7	YGR020C	SEC72	P39742	193 aa	Known RBP	0.8	□□□□□ -2.28
VMA7	YGR020C	HOP2	P53187	214 aa		0.8	□□□□□ -2.28
VMA7	YGR020C	YOR381W-A	Q3E804	55 aa		0.8	□□□□□ -2.28
VMA7	YGR020C	YKL102C	P34249	101 aa		0.79	□□□□□ -2.28
VMA7	YGR020C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
VMA7	YGR020C	EGD2	P38879	174 aa	Known RBP	0.79	□□□□□ -2.28
VMA7	YGR020C	YJR015W	P47090	510 aa		0.79	□□□□□ -2.28
VMA7	YGR020C	VPS28	Q02767	242 aa		0.79	□□□□□ -2.28
VMA7	YGR020C	SNO1	Q03144	224 aa		0.79	□□□□□ -2.28
VMA7	YGR020C	GIM5	Q04493	163 aa		0.79	□□□□□ -2.28
VMA7	YGR020C	RIM9	Q04734	239 aa		0.79	□□□□□ -2.28
VMA7	YGR020C	BRX1	Q08235	291 aa	Known RBP	0.79	□□□□□ -2.28
VMA7	YGR020C	RPL35A	P0CX84	120 aa	Known RBP	0.78	□□□□□ -2.28
VMA7	YGR020C	RPL35B	P0CX85	120 aa	Known RBP	0.78	□□□□□ -2.28
VMA7	YGR020C	SRP14	P38985	146 aa		0.78	□□□□□ -2.28
VMA7	YGR020C	RFC2	P40348	353 aa		0.78	□□□□□ -2.28
VMA7	YGR020C	YIP3	P53633	176 aa		0.78	□□□□□ -2.28
VMA7	YGR020C	GPI17	Q04080	534 aa		0.78	□□□□□ -2.28
VMA7	YGR020C	CMC2	Q3E7A4	109 aa		0.78	□□□□□ -2.28
VMA7	YGR020C	CPR5	P35176	225 aa		0.77	□□□□□ -2.29
VMA7	YGR020C	YKR070W	P36151	352 aa	Known RBP	0.77	□□□□□ -2.29
VMA7	YGR020C	FYV4	P38783	130 aa	Predicted RBP	0.77	□□□□□ -2.29
VMA7	YGR020C	YER121W	P40076	114 aa		0.77	□□□□□ -2.29
VMA7	YGR020C	POG1	P40473	351 aa		0.77	□□□□□ -2.29
VMA7	YGR020C	YKR005C	Q02203	525 aa		0.77	□□□□□ -2.29
VMA7	YGR020C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
VMA7	YGR020C	YKR041W	P36134	250 aa		0.76	□□□□□ -2.29

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