RNA–Protein interactions for RNA: YGL109W

YGL109W, Transcript of Dubious open reading frame, yeast

Gene YGL109W, Length 324 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL109W	YGL109W	YHL037C	P38733	133 aa		0.75	□□□□□ -2.29
YGL109W	YGL109W	YFL051C	P43552	160 aa		0.75	□□□□□ -2.29
YGL109W	YGL109W	PIR1	Q03178	341 aa		0.75	□□□□□ -2.29
YGL109W	YGL109W	RAD9	P14737	1309 aa		0.74	□□□□□ -2.29
YGL109W	YGL109W	YBR242W	P38331	238 aa		0.74	□□□□□ -2.29
YGL109W	YGL109W	TMA22	P47089	198 aa	Predicted RBP	0.74	□□□□□ -2.29
YGL109W	YGL109W	SBH1	P52870	82 aa		0.74	□□□□□ -2.29
YGL109W	YGL109W	YGL235W	P53071	178 aa		0.74	□□□□□ -2.29
YGL109W	YGL109W	YOL024W	Q08172	172 aa		0.74	□□□□□ -2.29
YGL109W	YGL109W	MPM1	P40364	252 aa		0.73	□□□□□ -2.29
YGL109W	YGL109W	CWC21	Q03375	135 aa	Known RBP	0.73	□□□□□ -2.29
YGL109W	YGL109W	RAD51	P25454	400 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	ADE1	P27616	306 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	UGX2	P32772	223 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	MAK5	P38112	773 aa	Predicted RBP	0.72	□□□□□ -2.29
YGL109W	YGL109W	RTC4	P53850	401 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	UPS1	Q05776	175 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	YOR342C	Q12182	319 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	ATP20	Q12233	115 aa		0.72	□□□□□ -2.29
YGL109W	YGL109W	DUR1,2	P32528	1835 aa	Known RBP	0.71	□□□□□ -2.3
YGL109W	YGL109W	SAC3	P46674	1301 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	TRX3	P25372	127 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	TAH1	P25638	111 aa	Predicted RBP	0.71	□□□□□ -2.3
YGL109W	YGL109W	ETR1	P38071	380 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	NSG1	P38837	291 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	FIT1	Q04433	528 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	ELP6	Q04868	273 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	ATG38	Q05789	226 aa	Known RBP	0.71	□□□□□ -2.3
YGL109W	YGL109W	NOC4	Q06512	552 aa	Predicted RBP	0.71	□□□□□ -2.3
YGL109W	YGL109W	DAS2	Q12084	232 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	YOR015W	Q12169	119 aa		0.71	□□□□□ -2.3
YGL109W	YGL109W	YLR422W	Q06409	1932 aa		0.7	□□□□□ -2.3
YGL109W	YGL109W	RPS24A	P0CX31	135 aa	Known RBP	0.7	□□□□□ -2.3
YGL109W	YGL109W	RPS24B	P0CX32	135 aa	Known RBP	0.7	□□□□□ -2.3
YGL109W	YGL109W	NSA2	P40078	261 aa	Known RBP	0.7	□□□□□ -2.3
YGL109W	YGL109W	SBH2	P52871	88 aa		0.7	□□□□□ -2.3
YGL109W	YGL109W	PGA1	P53896	198 aa		0.7	□□□□□ -2.3
YGL109W	YGL109W	GIM3	P53900	129 aa		0.7	□□□□□ -2.3
YGL109W	YGL109W	SMD2	Q06217	110 aa	Known RBP	0.7	□□□□□ -2.3
YGL109W	YGL109W	YPR014C	Q6B0W2	109 aa		0.7	□□□□□ -2.3
YGL109W	YGL109W	RRT1	P38192	103 aa		0.69	□□□□□ -2.3
YGL109W	YGL109W	NSE4	P43124	402 aa		0.69	□□□□□ -2.3
YGL109W	YGL109W	CGR1	P53188	120 aa		0.69	□□□□□ -2.3
YGL109W	YGL109W	AIM34	Q03673	198 aa		0.69	□□□□□ -2.3
YGL109W	YGL109W	GAL83	Q04739	417 aa		0.69	□□□□□ -2.3
YGL109W	YGL109W	YLR412C-A	Q3E742	68 aa		0.69	□□□□□ -2.3
YGL109W	YGL109W	YBL010C	P32788	280 aa		0.68	□□□□□ -2.3
YGL109W	YGL109W	NRK1	P53915	240 aa		0.68	□□□□□ -2.3
YGL109W	YGL109W	JIP3	O13555	125 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	YIP3	P53633	176 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	YHP1	Q04116	353 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	GRX8	Q05926	109 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	BRX1	Q08235	291 aa	Known RBP	0.67	□□□□□ -2.3
YGL109W	YGL109W	ATG41	Q12048	136 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	CCW12	Q12127	133 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	DGK1	Q12382	290 aa		0.67	□□□□□ -2.3
YGL109W	YGL109W	YAR064W	P39563	99 aa		0.66	□□□□□ -2.3
YGL109W	YGL109W	YER121W	P40076	114 aa		0.66	□□□□□ -2.3
YGL109W	YGL109W	SNO1	Q03144	224 aa		0.66	□□□□□ -2.3
YGL109W	YGL109W	DML1	Q03652	475 aa		0.66	□□□□□ -2.3
YGL109W	YGL109W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.66	□□□□□ -2.3
YGL109W	YGL109W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.65	□□□□□ -2.31	not detected
YGL109W	YGL109W	CPR5	P35176	225 aa		0.65	□□□□□ -2.31
YGL109W	YGL109W	CAF4	P36130	643 aa		0.65	□□□□□ -2.31
YGL109W	YGL109W	YKR041W	P36134	250 aa		0.65	□□□□□ -2.31
YGL109W	YGL109W	SEC72	P39742	193 aa	Known RBP	0.65	□□□□□ -2.31
YGL109W	YGL109W	YIL102C	P40488	101 aa		0.65	□□□□□ -2.31
YGL109W	YGL109W	HOP2	P53187	214 aa		0.65	□□□□□ -2.31
YGL109W	YGL109W	YMR030W-A	Q3E760	96 aa		0.65	□□□□□ -2.31
YGL109W	YGL109W	RPL35A	P0CX84	120 aa	Known RBP	0.64	□□□□□ -2.31
YGL109W	YGL109W	RPL35B	P0CX85	120 aa	Known RBP	0.64	□□□□□ -2.31
YGL109W	YGL109W	ATP7	P30902	174 aa		0.64	□□□□□ -2.31
YGL109W	YGL109W	ARC19	P33204	171 aa	Known RBP	0.64	□□□□□ -2.31
YGL109W	YGL109W	SRP14	P38985	146 aa		0.64	□□□□□ -2.31
YGL109W	YGL109W	SOL1	P50278	321 aa		0.64	□□□□□ -2.31
YGL109W	YGL109W	GIM5	Q04493	163 aa		0.64	□□□□□ -2.31
YGL109W	YGL109W	MPD1	Q12404	318 aa	Known RBP	0.64	□□□□□ -2.31
YGL109W	YGL109W	UBR1	P19812	1950 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	FMP49	A0A023PZB3	126 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	QCR6	P00127	147 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	AHC2	P25649	128 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	CCS1	P40202	249 aa	Known RBP	0.63	□□□□□ -2.31
YGL109W	YGL109W	POG1	P40473	351 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	DCV1	P43595	202 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	HHT1	P61830	136 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	RIM9	Q04734	239 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	SHH4	Q06236	168 aa		0.63	□□□□□ -2.31
YGL109W	YGL109W	HSP30	P25619	332 aa		0.62	□□□□□ -2.31
YGL109W	YGL109W	CSH1	P38287	376 aa		0.62	□□□□□ -2.31
YGL109W	YGL109W	FYV4	P38783	130 aa	Predicted RBP	0.62	□□□□□ -2.31
YGL109W	YGL109W	AVO2	Q04749	426 aa		0.62	□□□□□ -2.31
YGL109W	YGL109W	YOR381W-A	Q3E804	55 aa		0.62	□□□□□ -2.31
YGL109W	YGL109W	YKL102C	P34249	101 aa		0.61	□□□□□ -2.31
YGL109W	YGL109W	YNL140C	P53910	189 aa		0.61	□□□□□ -2.31
YGL109W	YGL109W	VPS28	Q02767	242 aa		0.61	□□□□□ -2.31
YGL109W	YGL109W	PEX11	Q12462	236 aa		0.61	□□□□□ -2.31
YGL109W	YGL109W	CMC2	Q3E7A4	109 aa		0.61	□□□□□ -2.31
YGL109W	YGL109W	MAK31	P23059	88 aa		0.6	□□□□□ -2.31
YGL109W	YGL109W	CLG1	P35190	452 aa		0.6	□□□□□ -2.31
YGL109W	YGL109W	AME1	P38313	324 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms