RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C EDC3P39998 551 aaKnown RBP1.91□□□□□ -2.1
TCA17YEL048C DAD4P69851 72 aa1.91□□□□□ -2.1
TCA17YEL048C HSK3P69852 69 aa1.91□□□□□ -2.1
TCA17YEL048C YDR476CQ03362 224 aa1.91□□□□□ -2.1
TCA17YEL048C YHR007C-AQ07074 71 aa1.91□□□□□ -2.1
TCA17YEL048C DAS2Q12084 232 aa1.91□□□□□ -2.1
TCA17YEL048C HSP30P25619 332 aa1.9□□□□□ -2.11
TCA17YEL048C SFK1P35735 353 aa1.9□□□□□ -2.11
TCA17YEL048C PAM17P36147 197 aa1.9□□□□□ -2.11
TCA17YEL048C FIG1P38224 298 aa1.9□□□□□ -2.11
TCA17YEL048C YNL200CP40165 246 aaKnown RBP1.9□□□□□ -2.11
TCA17YEL048C YFH7P43591 353 aa1.9□□□□□ -2.11
TCA17YEL048C YNL033WP53964 284 aa1.9□□□□□ -2.11
TCA17YEL048C VPS28Q02767 242 aa1.9□□□□□ -2.11
TCA17YEL048C PRP11Q07350 266 aaPredicted RBP1.9□□□□□ -2.11
TCA17YEL048C YOR015WQ12169 119 aa1.9□□□□□ -2.11
TCA17YEL048C ATP20Q12233 115 aa1.9□□□□□ -2.11
TCA17YEL048C RPS28BP0C0X0 67 aaKnown RBP1.89□□□□□ -2.11
TCA17YEL048C YOL162WP0CF19 215 aa1.89□□□□□ -2.11
TCA17YEL048C STP22P25604 385 aa1.89□□□□□ -2.11
TCA17YEL048C DER1P38307 211 aa1.89□□□□□ -2.11
TCA17YEL048C YBR219CP38317 127 aa1.89□□□□□ -2.11
TCA17YEL048C VMA22P38784 181 aa1.89□□□□□ -2.11
TCA17YEL048C RPL13BP40212 199 aaKnown RBP1.89□□□□□ -2.11
TCA17YEL048C YGL101WP53144 215 aa1.89□□□□□ -2.11
TCA17YEL048C YKR005CQ02203 525 aa1.89□□□□□ -2.11
TCA17YEL048C RPL13AQ12690 199 aaPredicted RBP1.89□□□□□ -2.11
TCA17YEL048C EFG1Q3E705 233 aaKnown RBP1.89□□□□□ -2.11
TCA17YEL048C RPS28AQ3E7X9 67 aaPredicted RBP1.89□□□□□ -2.11
TCA17YEL048C FLO9P39712 1322 aa1.89□□□□□ -2.11
TCA17YEL048C PBI2P0CT04 75 aaKnown RBP1.88□□□□□ -2.11
TCA17YEL048C RRT1P38192 103 aa1.88□□□□□ -2.11
TCA17YEL048C YPL073CP40323 161 aa1.88□□□□□ -2.11
TCA17YEL048C YGL235WP53071 178 aa1.88□□□□□ -2.11
TCA17YEL048C YLR162WQ06235 118 aa1.88□□□□□ -2.11
TCA17YEL048C YPR013CQ12145 317 aa1.88□□□□□ -2.11
TCA17YEL048C YIL177CP40434 1758 aa1.87□□□□□ -2.11
TCA17YEL048C YJL225CP40889 1758 aa1.87□□□□□ -2.11
TCA17YEL048C MDM35O60200 86 aa1.87□□□□□ -2.11
TCA17YEL048C RAD6P06104 172 aa1.87□□□□□ -2.11
TCA17YEL048C GPA2P10823 449 aa1.87□□□□□ -2.11
TCA17YEL048C YGL010WP25338 174 aa1.87□□□□□ -2.11
TCA17YEL048C GSP2P32836 220 aaKnown RBP1.87□□□□□ -2.11
TCA17YEL048C YRA2P36036 203 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
TCA17YEL048C FYV4P38783 130 aaPredicted RBP1.87□□□□□ -2.11
TCA17YEL048C SBH1P52870 82 aa1.87□□□□□ -2.11
TCA17YEL048C DIG2Q03373 323 aaKnown RBP1.87□□□□□ -2.11
TCA17YEL048C THI74Q04083 370 aa1.87□□□□□ -2.11
TCA17YEL048C GAL83Q04739 417 aa1.87□□□□□ -2.11
TCA17YEL048C YCR023CP25351 611 aa1.86□□□□□ -2.11
TCA17YEL048C BUB2P26448 306 aaPredicted RBP1.86□□□□□ -2.11
TCA17YEL048C UPS2P35200 230 aa1.86□□□□□ -2.11
TCA17YEL048C YBR220CP38318 560 aa1.86□□□□□ -2.11
TCA17YEL048C SOL1P50278 321 aa1.86□□□□□ -2.11
TCA17YEL048C THG1P53215 237 aaKnown RBP1.86□□□□□ -2.11
TCA17YEL048C LSM3P57743 89 aaKnown RBP1.86□□□□□ -2.11
TCA17YEL048C MZM1Q03429 123 aaPredicted RBP1.86□□□□□ -2.11
TCA17YEL048C RNH202Q05635 350 aa1.86□□□□□ -2.11
TCA17YEL048C YPD1Q07688 167 aa1.86□□□□□ -2.11
TCA17YEL048C UBI4P0CG63 381 aaKnown RBP1.85□□□□□ -2.11
TCA17YEL048C DLS1P40366 167 aa1.85□□□□□ -2.11
TCA17YEL048C FLX1P40464 311 aa1.85□□□□□ -2.11
TCA17YEL048C ALB1P47019 175 aaPredicted RBP1.85□□□□□ -2.11
TCA17YEL048C SBH2P52871 88 aa1.85□□□□□ -2.11
TCA17YEL048C RCE1Q03530 315 aa1.85□□□□□ -2.11
TCA17YEL048C DML1Q03652 475 aa1.85□□□□□ -2.11
TCA17YEL048C CSI2Q08054 341 aa1.85□□□□□ -2.11
TCA17YEL048C COX8P04039 78 aa1.84□□□□□ -2.11
TCA17YEL048C MAK31P23059 88 aa1.84□□□□□ -2.11
TCA17YEL048C SRP102P36057 244 aaPredicted RBP1.84□□□□□ -2.11
TCA17YEL048C YKR045CP36138 183 aa1.84□□□□□ -2.11
TCA17YEL048C YHL018WP38744 120 aaPredicted RBP1.84□□□□□ -2.11
TCA17YEL048C YEL073CP39974 107 aa1.84□□□□□ -2.11
TCA17YEL048C HPA3P39979 161 aa1.84□□□□□ -2.11
TCA17YEL048C RIO2P40160 425 aaKnown RBP1.84□□□□□ -2.11
TCA17YEL048C APQ12P40532 138 aa1.84□□□□□ -2.11
TCA17YEL048C NQM1P53228 333 aaPredicted RBP1.84□□□□□ -2.11
TCA17YEL048C CWC27Q02770 301 aa1.84□□□□□ -2.11
TCA17YEL048C PIR1Q03178 341 aa1.84□□□□□ -2.11
TCA17YEL048C SYM1Q06563 197 aa1.84□□□□□ -2.11
TCA17YEL048C YLR046CQ12253 270 aa1.84□□□□□ -2.11
TCA17YEL048C YOR381W-AQ3E804 55 aa1.84□□□□□ -2.11
TCA17YEL048C TRM3Q07527 1436 aa1.83□□□□□ -2.12
TCA17YEL048C YAE1P47118 141 aaPredicted RBP1.83□□□□□ -2.12
TCA17YEL048C MOG1P47123 218 aa1.83□□□□□ -2.12
TCA17YEL048C PAC10P48363 199 aa1.83□□□□□ -2.12
TCA17YEL048C FYV12Q08559 129 aa1.83□□□□□ -2.12
TCA17YEL048C PET20Q99373 253 aa1.83□□□□□ -2.12
TCA17YEL048C ATP5P09457 212 aa1.82□□□□□ -2.12
TCA17YEL048C NSE4P43124 402 aa1.82□□□□□ -2.12
TCA17YEL048C HHT1P61830 136 aa1.82□□□□□ -2.12
TCA17YEL048C RRP17Q04031 235 aaPredicted RBP1.82□□□□□ -2.12
TCA17YEL048C YHP1Q04116 353 aa1.82□□□□□ -2.12
TCA17YEL048C YDR391CQ04170 232 aa1.82□□□□□ -2.12
TCA17YEL048C QCR8P08525 94 aa1.81□□□□□ -2.12
TCA17YEL048C RPL2AP0CX45 254 aaKnown RBP1.81□□□□□ -2.12
TCA17YEL048C RPL2BP0CX46 254 aaKnown RBP1.81□□□□□ -2.12
TCA17YEL048C FPR1P20081 114 aaKnown RBP1.81□□□□□ -2.12
TCA17YEL048C PEX34P25584 144 aa1.81□□□□□ -2.12
TCA17YEL048C RPB7P34087 171 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms