RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YMR252CQ04814 134 aa1.23□□□□□ -2.21
SHS1YDL225W ATG38Q05789 226 aaKnown RBP1.23□□□□□ -2.21
SHS1YDL225W YLR412C-AQ3E742 68 aa1.23□□□□□ -2.21
SHS1YDL225W RPB7P34087 171 aa1.22□□□□□ -2.21
SHS1YDL225W YKL102CP34249 101 aa1.22□□□□□ -2.21
SHS1YDL225W SEC72P39742 193 aaKnown RBP1.22□□□□□ -2.21
SHS1YDL225W YEL067CP39978 195 aa1.22□□□□□ -2.21
SHS1YDL225W POG1P40473 351 aa1.22□□□□□ -2.21
SHS1YDL225W SBH1P52870 82 aa1.22□□□□□ -2.21
SHS1YDL225W ATP20Q12233 115 aa1.22□□□□□ -2.21
SHS1YDL225W YEL008WP40001 126 aa1.21□□□□□ -2.22
SHS1YDL225W NSA2P40078 261 aaKnown RBP1.21□□□□□ -2.22
SHS1YDL225W NVJ1P38881 321 aa1.2□□□□□ -2.22
SHS1YDL225W SOK1P40317 901 aa1.2□□□□□ -2.22
SHS1YDL225W ALB1P47019 175 aaPredicted RBP1.2□□□□□ -2.22
SHS1YDL225W GPI17Q04080 534 aa1.2□□□□□ -2.22
SHS1YDL225W DGK1Q12382 290 aa1.2□□□□□ -2.22
SHS1YDL225W YHR212W-AP0CX91 67 aa1.2□□□□□ -2.22
SHS1YDL225W SEC14P24280 304 aaKnown RBP1.2□□□□□ -2.22
SHS1YDL225W STP22P25604 385 aa1.2□□□□□ -2.22
SHS1YDL225W CLG1P35190 452 aa1.2□□□□□ -2.22
SHS1YDL225W RFC2P40348 353 aa1.2□□□□□ -2.22
SHS1YDL225W UPS3Q04006 179 aa1.2□□□□□ -2.22
SHS1YDL225W DAS2Q12084 232 aa1.2□□□□□ -2.22
SHS1YDL225W YLR422WQ06409 1932 aa1.19□□□□□ -2.22
SHS1YDL225W YCR023CP25351 611 aa1.19□□□□□ -2.22
SHS1YDL225W TRR1P29509 319 aaKnown RBP1.19□□□□□ -2.22
SHS1YDL225W CPR5P35176 225 aa1.19□□□□□ -2.22
SHS1YDL225W RRT1P38192 103 aa1.19□□□□□ -2.22
SHS1YDL225W YIP3P53633 176 aa1.19□□□□□ -2.22
SHS1YDL225W PIR1Q03178 341 aa1.19□□□□□ -2.22
SHS1YDL225W GAL83Q04739 417 aa1.19□□□□□ -2.22
SHS1YDL225W YCL042WP25572 119 aa1.18□□□□□ -2.22
SHS1YDL225W JAC1P53193 184 aa1.18□□□□□ -2.22
SHS1YDL225W YOR015WQ12169 119 aa1.18□□□□□ -2.22
SHS1YDL225W PST2Q12335 198 aaKnown RBP1.18□□□□□ -2.22
SHS1YDL225W HPT1Q04178 221 aaKnown RBP1.17□□□□□ -2.22
SHS1YDL225W SLH1P53327 1967 aaKnown RBP1.17□□□□□ -2.22
SHS1YDL225W FYV4P38783 130 aaPredicted RBP1.16□□□□□ -2.22
SHS1YDL225W EGD2P38879 174 aaKnown RBP1.16□□□□□ -2.22
SHS1YDL225W SOL1P50278 321 aa1.16□□□□□ -2.22
SHS1YDL225W RRP17Q04031 235 aaPredicted RBP1.16□□□□□ -2.22
SHS1YDL225W PEX11Q12462 236 aa1.16□□□□□ -2.22
SHS1YDL225W COA3Q3E7B2 85 aa1.16□□□□□ -2.22
SHS1YDL225W HSP30P25619 332 aa1.16□□□□□ -2.22
SHS1YDL225W MAK5P38112 773 aaPredicted RBP1.16□□□□□ -2.22
SHS1YDL225W YNL200CP40165 246 aaKnown RBP1.16□□□□□ -2.22
SHS1YDL225W TTI2P47168 421 aa1.16□□□□□ -2.22
SHS1YDL225W YGL235WP53071 178 aa1.16□□□□□ -2.22
SHS1YDL225W YLR460CP54007 376 aa1.16□□□□□ -2.22
SHS1YDL225W MET31Q03081 177 aa1.16□□□□□ -2.22
SHS1YDL225W YOR214CQ12282 236 aa1.16□□□□□ -2.22
SHS1YDL225W SRP14P38985 146 aa1.15□□□□□ -2.23
SHS1YDL225W MPM1P40364 252 aa1.15□□□□□ -2.23
SHS1YDL225W VPS28Q02767 242 aa1.15□□□□□ -2.23
SHS1YDL225W DML1Q03652 475 aa1.15□□□□□ -2.23
SHS1YDL225W YHP1Q04116 353 aa1.15□□□□□ -2.23
SHS1YDL225W UPS1Q05776 175 aa1.15□□□□□ -2.23
SHS1YDL225W STF2P16965 84 aa1.14□□□□□ -2.23
SHS1YDL225W NSE4P43124 402 aa1.14□□□□□ -2.23
SHS1YDL225W YKR005CQ02203 525 aa1.14□□□□□ -2.23
SHS1YDL225W GRX5Q02784 150 aa1.14□□□□□ -2.23
SHS1YDL225W SEN2P16658 377 aa1.13□□□□□ -2.23
SHS1YDL225W RAD51P25454 400 aa1.13□□□□□ -2.23
SHS1YDL225W HUA1P40325 198 aa1.13□□□□□ -2.23
SHS1YDL225W RPL37AP49166 88 aaKnown RBP1.13□□□□□ -2.23
SHS1YDL225W TIM13P53299 105 aa1.13□□□□□ -2.23
SHS1YDL225W YMR007WQ03675 126 aa1.13□□□□□ -2.23
SHS1YDL225W PLP1Q04004 230 aa1.13□□□□□ -2.23
SHS1YDL225W RIM9Q04734 239 aa1.13□□□□□ -2.23
SHS1YDL225W YPR127WQ06494 345 aa1.13□□□□□ -2.23
SHS1YDL225W ATG41Q12048 136 aa1.13□□□□□ -2.23
SHS1YDL225W RPL35AP0CX84 120 aaKnown RBP1.13□□□□□ -2.23
SHS1YDL225W RPL35BP0CX85 120 aaKnown RBP1.13□□□□□ -2.23
SHS1YDL225W YDR391CQ04170 232 aa1.13□□□□□ -2.23
SHS1YDL225W YOR381W-AQ3E804 55 aa1.13□□□□□ -2.23
SHS1YDL225W CHD1P32657 1468 aa1.13□□□□□ -2.23
SHS1YDL225W YNL140CP53910 189 aa1.12□□□□□ -2.23
SHS1YDL225W ELP6Q04868 273 aa1.12□□□□□ -2.23
SHS1YDL225W YLR050CQ12155 161 aaKnown RBP1.12□□□□□ -2.23
SHS1YDL225W MAK31P23059 88 aa1.11□□□□□ -2.23
SHS1YDL225W YBL010CP32788 280 aa1.11□□□□□ -2.23
SHS1YDL225W CCS1P40202 249 aaKnown RBP1.11□□□□□ -2.23
SHS1YDL225W XPT1P47165 209 aa1.11□□□□□ -2.23
SHS1YDL225W GIM5Q04493 163 aa1.11□□□□□ -2.23
SHS1YDL225W YMR030W-AQ3E760 96 aa1.11□□□□□ -2.23
SHS1YDL225W TAR1Q8TGM6 124 aa1.11□□□□□ -2.23
SHS1YDL225W SAC3P46674 1301 aa1.11□□□□□ -2.23
SHS1YDL225W RAD6P06104 172 aa1.1□□□□□ -2.23
SHS1YDL225W YRA2P36036 203 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
SHS1YDL225W MRPL15P36523 253 aa1.1□□□□□ -2.23
SHS1YDL225W ETR1P38071 380 aa1.1□□□□□ -2.23
SHS1YDL225W CSH1P38287 376 aa1.1□□□□□ -2.23
SHS1YDL225W YBR242WP38331 238 aa1.1□□□□□ -2.23
SHS1YDL225W HFA1P32874 2273 aa1.1□□□□□ -2.23
SHS1YDL225W SBH2P52871 88 aa1.1□□□□□ -2.23
SHS1YDL225W YEL073CP39974 107 aa1.09□□□□□ -2.24
SHS1YDL225W HSK3P69852 69 aa1.09□□□□□ -2.24
SHS1YDL225W YPR203WQ08994 102 aa1.09□□□□□ -2.24
SHS1YDL225W UBC8P28263 218 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms