RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W SEC11P15367 167 aa5.66□□□□□ -1.5
BDF2YDL070W RPI1P23250 407 aaKnown RBP5.66□□□□□ -1.5
BDF2YDL070W HMX1P32339 317 aa5.66□□□□□ -1.5
BDF2YDL070W MSL1P40567 111 aaPredicted RBP5.66□□□□□ -1.5
BDF2YDL070W CTK2P46962 323 aa5.66□□□□□ -1.5
BDF2YDL070W SOD1P00445 154 aaKnown RBP5.66□□□□□ -1.5
BDF2YDL070W RPP2BP02400 110 aaKnown RBP5.66□□□□□ -1.5
BDF2YDL070W CDC36P06100 191 aaPredicted RBP5.66□□□□□ -1.5
BDF2YDL070W FCY2P17064 533 aa5.66□□□□□ -1.5
BDF2YDL070W PHD1P36093 366 aa5.66□□□□□ -1.5
BDF2YDL070W YBR184WP38299 523 aa5.66□□□□□ -1.5
BDF2YDL070W YJL193WP39542 402 aa5.66□□□□□ -1.5
BDF2YDL070W YIL163CP40448 117 aa5.66□□□□□ -1.5
BDF2YDL070W DFG10P40526 253 aa5.66□□□□□ -1.5
BDF2YDL070W YDR102CQ03864 110 aa5.66□□□□□ -1.5
BDF2YDL070W SEI1Q06058 285 aa5.66□□□□□ -1.5
BDF2YDL070W YPR147CQ06522 304 aaKnown RBP5.66□□□□□ -1.5
BDF2YDL070W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
BDF2YDL070W TGS1Q12052 315 aa5.66□□□□□ -1.5
BDF2YDL070W GEP5Q12393 293 aa5.66□□□□□ -1.5
BDF2YDL070W RPS22BQ3E7Y3 130 aaKnown RBP5.66□□□□□ -1.5
BDF2YDL070W CUP2P15315 225 aa5.65□□□□□ -1.51
BDF2YDL070W MRP49P32388 137 aa5.65□□□□□ -1.51
BDF2YDL070W YHL044WP38727 235 aa5.65□□□□□ -1.51
BDF2YDL070W CYB5P40312 120 aa5.65□□□□□ -1.51
BDF2YDL070W PRP11Q07350 266 aaPredicted RBP5.65□□□□□ -1.51
BDF2YDL070W NAG1Q8TGN9 163 aa5.65□□□□□ -1.51
BDF2YDL070W RPL30P14120 105 aaKnown RBP5.64□□□□□ -1.51
BDF2YDL070W YKL107WP34251 309 aa5.64□□□□□ -1.51
BDF2YDL070W DER1P38307 211 aa5.64□□□□□ -1.51
BDF2YDL070W MSY1P48527 492 aa5.64□□□□□ -1.51
BDF2YDL070W GEP7P53171 287 aa5.64□□□□□ -1.51
BDF2YDL070W LPP1Q04396 274 aa5.64□□□□□ -1.51
BDF2YDL070W OPI10Q08202 246 aa5.64□□□□□ -1.51
BDF2YDL070W YOR186WQ08560 144 aa5.64□□□□□ -1.51
BDF2YDL070W IRC13Q08630 104 aa5.64□□□□□ -1.51
BDF2YDL070W ATO3Q12359 275 aa5.64□□□□□ -1.51
BDF2YDL070W SEC4P07560 215 aaKnown RBP5.64□□□□□ -1.51
BDF2YDL070W YSF3P0C074 85 aaPredicted RBP5.64□□□□□ -1.51
BDF2YDL070W MSI1P13712 422 aa5.64□□□□□ -1.51
BDF2YDL070W MXR2P25566 168 aa5.64□□□□□ -1.51
BDF2YDL070W SRP21P32342 167 aa5.64□□□□□ -1.51
BDF2YDL070W YPT53P36019 220 aa5.64□□□□□ -1.51
BDF2YDL070W SWD3P38123 315 aa5.64□□□□□ -1.51
BDF2YDL070W COX15P40086 486 aa5.64□□□□□ -1.51
BDF2YDL070W SEC24P40482 926 aaKnown RBP5.64□□□□□ -1.51
BDF2YDL070W YIP5P53108 310 aa5.64□□□□□ -1.51
BDF2YDL070W YGR050CP53231 118 aa5.64□□□□□ -1.51
BDF2YDL070W RHO5P53879 331 aaKnown RBP5.64□□□□□ -1.51
BDF2YDL070W YFH1Q07540 174 aa5.64□□□□□ -1.51
BDF2YDL070W RKI1Q12189 258 aa5.64□□□□□ -1.51
BDF2YDL070W TAD3Q9URQ3 322 aa5.64□□□□□ -1.51
BDF2YDL070W YER190C-BP0CX94 160 aa5.63□□□□□ -1.51
BDF2YDL070W YEL077W-AP0CX95 160 aa5.63□□□□□ -1.51
BDF2YDL070W YGR296C-BP0CX96 160 aa5.63□□□□□ -1.51
BDF2YDL070W YPL283W-BP0CX97 160 aa5.63□□□□□ -1.51
BDF2YDL070W YPR204C-AP0CX98 160 aa5.63□□□□□ -1.51
BDF2YDL070W ARF1P11076 181 aaKnown RBP5.63□□□□□ -1.51
BDF2YDL070W FPR1P20081 114 aaKnown RBP5.63□□□□□ -1.51
BDF2YDL070W CPD1P53314 239 aa5.63□□□□□ -1.51
BDF2YDL070W YOL118CQ08259 102 aa5.63□□□□□ -1.51
BDF2YDL070W FSF1Q12029 327 aaKnown RBP5.63□□□□□ -1.51
BDF2YDL070W YRA1Q12159 226 aaKnown RBP5.63□□□□□ -1.51
BDF2YDL070W YLR363W-AQ3E747 85 aa5.63□□□□□ -1.51
BDF2YDL070W HSP150P32478 413 aa5.62□□□□□ -1.51
BDF2YDL070W EMP70P32802 667 aa5.62□□□□□ -1.51
BDF2YDL070W YKR070WP36151 352 aaKnown RBP5.62□□□□□ -1.51
BDF2YDL070W YBR220CP38318 560 aa5.62□□□□□ -1.51
BDF2YDL070W GPP2P40106 250 aaKnown RBP5.62□□□□□ -1.51
BDF2YDL070W SPG5P42933 373 aa5.62□□□□□ -1.51
BDF2YDL070W TDA4P47153 279 aa5.62□□□□□ -1.51
BDF2YDL070W COQ5P49017 307 aa5.62□□□□□ -1.51
BDF2YDL070W HNT2P49775 206 aa5.62□□□□□ -1.51
BDF2YDL070W YGR126WP53274 230 aa5.62□□□□□ -1.51
BDF2YDL070W YLR460CP54007 376 aa5.62□□□□□ -1.51
BDF2YDL070W YDL129WQ07555 291 aa5.62□□□□□ -1.51
BDF2YDL070W HRD1Q08109 551 aa5.62□□□□□ -1.51
BDF2YDL070W YOR192C-CQ3E736 78 aa5.62□□□□□ -1.51
BDF2YDL070W ATG40Q99325 256 aa5.62□□□□□ -1.51
BDF2YDL070W ZRT1P32804 376 aa5.62□□□□□ -1.51
BDF2YDL070W YUH1P35127 236 aa5.62□□□□□ -1.51
BDF2YDL070W YBR090CP38253 122 aa5.62□□□□□ -1.51
BDF2YDL070W YNL198CP40166 100 aa5.62□□□□□ -1.51
BDF2YDL070W SHR5P41912 237 aa5.62□□□□□ -1.51
BDF2YDL070W DSK2P48510 373 aa5.62□□□□□ -1.51
BDF2YDL070W YNR048WP53740 393 aa5.62□□□□□ -1.51
BDF2YDL070W GRH1Q04410 372 aaKnown RBP5.62□□□□□ -1.51
BDF2YDL070W SWT1Q12104 458 aa5.62□□□□□ -1.51
BDF2YDL070W POC4Q12245 148 aaPredicted RBP5.62□□□□□ -1.51
BDF2YDL070W CYC7P00045 113 aa5.61□□□□□ -1.51
BDF2YDL070W YPT1P01123 206 aaKnown RBP5.61□□□□□ -1.51
BDF2YDL070W RPP2AP05319 106 aaKnown RBP5.61□□□□□ -1.51
BDF2YDL070W QRI5P32344 111 aa5.61□□□□□ -1.51
BDF2YDL070W RPS27AP35997 82 aaKnown RBP5.61□□□□□ -1.51
BDF2YDL070W RPS27BP38711 82 aa5.61□□□□□ -1.51
BDF2YDL070W TNA1P53322 534 aa5.61□□□□□ -1.51
BDF2YDL070W DMA2P53924 522 aa5.61□□□□□ -1.51
BDF2YDL070W DIC1Q06143 298 aa5.61□□□□□ -1.51
BDF2YDL070W YHR214C-EQ8TGK0 99 aa5.61□□□□□ -1.51
BDF2YDL070W YAL064W-BO13512 126 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms