RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C TIM9O74700 87 aa1.66□□□□□ -2.14
PRP6YBR055C BUB2P26448 306 aaPredicted RBP1.66□□□□□ -2.14
PRP6YBR055C TIF34P40217 347 aaKnown RBP1.66□□□□□ -2.14
PRP6YBR055C AIF1P52923 378 aa1.66□□□□□ -2.14
PRP6YBR055C NQM1P53228 333 aaPredicted RBP1.66□□□□□ -2.14
PRP6YBR055C PGA1P53896 198 aa1.66□□□□□ -2.14
PRP6YBR055C YDC1Q02896 317 aa1.66□□□□□ -2.14
PRP6YBR055C YDR476CQ03362 224 aa1.66□□□□□ -2.14
PRP6YBR055C YOL014WQ08110 124 aa1.66□□□□□ -2.14
PRP6YBR055C PDR18P53756 1333 aa1.65□□□□□ -2.14
PRP6YBR055C MSW1P04803 379 aa1.65□□□□□ -2.15
PRP6YBR055C ATP15P21306 62 aa1.65□□□□□ -2.15
PRP6YBR055C FMP23P38231 175 aa1.65□□□□□ -2.15
PRP6YBR055C SLM6P38343 150 aa1.65□□□□□ -2.15
PRP6YBR055C MED6P38782 295 aa1.65□□□□□ -2.15
PRP6YBR055C SKI6P46948 246 aaPredicted RBP1.65□□□□□ -2.15
PRP6YBR055C DSK2P48510 373 aa1.65□□□□□ -2.15
PRP6YBR055C MPA43P53583 542 aaPredicted RBP1.65□□□□□ -2.15
PRP6YBR055C SPG3Q04398 127 aaPredicted RBP1.65□□□□□ -2.15
PRP6YBR055C ARR2Q06597 130 aa1.65□□□□□ -2.15
PRP6YBR055C FEX1Q08913 375 aa1.65□□□□□ -2.15
PRP6YBR055C FEX2Q08991 375 aa1.65□□□□□ -2.15
PRP6YBR055C YOR342CQ12182 319 aa1.65□□□□□ -2.15
PRP6YBR055C MPD1Q12404 318 aaKnown RBP1.65□□□□□ -2.15
PRP6YBR055C TSC3Q3E790 80 aa1.65□□□□□ -2.15
PRP6YBR055C PET54P10834 293 aa1.65□□□□□ -2.15
PRP6YBR055C OCH1P31755 480 aa1.65□□□□□ -2.15
PRP6YBR055C MDH3P32419 343 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
PRP6YBR055C TVP38P36164 337 aa1.65□□□□□ -2.15
PRP6YBR055C OPY1P38271 328 aa1.65□□□□□ -2.15
PRP6YBR055C SER2P42941 309 aa1.65□□□□□ -2.15
PRP6YBR055C YML100W-AQ8TGT0 57 aa1.65□□□□□ -2.15
PRP6YBR055C KRE1P17260 313 aa1.64□□□□□ -2.15
PRP6YBR055C MRPS28P21771 286 aa1.64□□□□□ -2.15
PRP6YBR055C AGA2P32781 87 aa1.64□□□□□ -2.15
PRP6YBR055C KDX1P36005 433 aa1.64□□□□□ -2.15
PRP6YBR055C MRPL17P36528 281 aa1.64□□□□□ -2.15
PRP6YBR055C GPI14P47088 403 aaKnown RBP1.64□□□□□ -2.15
PRP6YBR055C SOL1P50278 321 aa1.64□□□□□ -2.15
PRP6YBR055C CAB4P53332 305 aa1.64□□□□□ -2.15
PRP6YBR055C COS6P53344 381 aa1.64□□□□□ -2.15
PRP6YBR055C GIS2P53849 153 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
PRP6YBR055C IES4Q08561 116 aa1.64□□□□□ -2.15
PRP6YBR055C MNN5P46982 586 aa1.64□□□□□ -2.15
PRP6YBR055C YDR274CP87283 123 aa1.64□□□□□ -2.15
PRP6YBR055C TMA20P89886 181 aaPredicted RBP1.64□□□□□ -2.15
PRP6YBR055C CCA1P21269 546 aa1.63□□□□□ -2.15
PRP6YBR055C YEA4P40004 342 aa1.63□□□□□ -2.15
PRP6YBR055C FCY21P40039 528 aa1.63□□□□□ -2.15
PRP6YBR055C SNX4P47057 423 aa1.63□□□□□ -2.15
PRP6YBR055C PAN3P36102 679 aaPredicted RBP1.63□□□□□ -2.15
PRP6YBR055C RFC2P40348 353 aa1.63□□□□□ -2.15
PRP6YBR055C GVP36P40531 326 aaKnown RBP1.63□□□□□ -2.15
PRP6YBR055C YPR195CQ06594 109 aa1.63□□□□□ -2.15
PRP6YBR055C YPR202WQ08993 238 aa1.63□□□□□ -2.15
PRP6YBR055C DGK1Q12382 290 aa1.63□□□□□ -2.15
PRP6YBR055C EFG1Q3E705 233 aaKnown RBP1.63□□□□□ -2.15
PRP6YBR055C SPO13P23624 291 aa1.62□□□□□ -2.15
PRP6YBR055C CSH1P38287 376 aa1.62□□□□□ -2.15
PRP6YBR055C YHR180WP38868 163 aa1.62□□□□□ -2.15
PRP6YBR055C EAF6P47128 113 aa1.62□□□□□ -2.15
PRP6YBR055C TDA4P47153 279 aa1.62□□□□□ -2.15
PRP6YBR055C YGL088WP53151 121 aa1.62□□□□□ -2.15
PRP6YBR055C RDS3Q06835 107 aaPredicted RBP1.62□□□□□ -2.15
PRP6YBR055C PEX34P25584 144 aa1.62□□□□□ -2.15
PRP6YBR055C NSG1P38837 291 aa1.62□□□□□ -2.15
PRP6YBR055C YER134CP40081 178 aa1.62□□□□□ -2.15
PRP6YBR055C PGD1P40356 397 aa1.62□□□□□ -2.15
PRP6YBR055C YMR099CQ03161 297 aaKnown RBP1.62□□□□□ -2.15
PRP6YBR055C NEJ1Q06148 342 aa1.62□□□□□ -2.15
PRP6YBR055C CPA1P07258 411 aaKnown RBP1.61□□□□□ -2.15
PRP6YBR055C RPL2AP0CX45 254 aaKnown RBP1.61□□□□□ -2.15
PRP6YBR055C RPL2BP0CX46 254 aaKnown RBP1.61□□□□□ -2.15
PRP6YBR055C FMT1P32785 401 aa1.61□□□□□ -2.15
PRP6YBR055C YFL019CP43576 117 aa1.61□□□□□ -2.15
PRP6YBR055C YGL101WP53144 215 aa1.61□□□□□ -2.15
PRP6YBR055C THI74Q04083 370 aa1.61□□□□□ -2.15
PRP6YBR055C SPC2Q04969 178 aa1.61□□□□□ -2.15
PRP6YBR055C ATO3Q12359 275 aa1.61□□□□□ -2.15
PRP6YBR055C RSA4P25382 515 aaKnown RBP1.61□□□□□ -2.15
PRP6YBR055C YHL026CP38740 315 aa1.61□□□□□ -2.15
PRP6YBR055C MOG1P47123 218 aa1.61□□□□□ -2.15
PRP6YBR055C NAT3Q06504 195 aa1.61□□□□□ -2.15
PRP6YBR055C DAS2Q12084 232 aa1.61□□□□□ -2.15
PRP6YBR055C YAR023CD6VPM8 179 aa1.6□□□□□ -2.15
PRP6YBR055C UBI4P0CG63 381 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C MIG1P27705 504 aa1.6□□□□□ -2.15
PRP6YBR055C UBC8P28263 218 aa1.6□□□□□ -2.15
PRP6YBR055C SCM4P32564 187 aa1.6□□□□□ -2.15
PRP6YBR055C POP7P38291 140 aa1.6□□□□□ -2.15
PRP6YBR055C VTC1P40046 129 aaRIP-Chip data1.6□□□□□ -2.15not detected
PRP6YBR055C YJR146WP47174 117 aa1.6□□□□□ -2.15
PRP6YBR055C SLM2P53955 656 aa1.6□□□□□ -2.15
PRP6YBR055C LSM3P57743 89 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C PBI2P0CT04 75 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C NSP1P14907 823 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C UMP1P38293 148 aa1.6□□□□□ -2.15
PRP6YBR055C GIM4P40005 111 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C TTI2P47168 421 aa1.6□□□□□ -2.15
PRP6YBR055C YGR219WP53307 113 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms