RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C PRM15Q03262 622 aa1.9□□□□□ -2.11
CLN3YAL040C ARR2Q06597 130 aa1.9□□□□□ -2.11
CLN3YAL040C TFC7Q12415 435 aa1.9□□□□□ -2.11
CLN3YAL040C SAL1D6W196 494 aa1.89□□□□□ -2.11
CLN3YAL040C MIR1P23641 311 aaKnown RBP1.89□□□□□ -2.11
CLN3YAL040C CPR4P25334 318 aa1.89□□□□□ -2.11
CLN3YAL040C ERG2P32352 222 aa1.89□□□□□ -2.11
CLN3YAL040C PDC2P32896 925 aa1.89□□□□□ -2.11
CLN3YAL040C CLB6P32943 380 aa1.89□□□□□ -2.11
CLN3YAL040C YKL075CP36083 450 aa1.89□□□□□ -2.11
CLN3YAL040C SWD3P38123 315 aa1.89□□□□□ -2.11
CLN3YAL040C CUE1P38428 203 aa1.89□□□□□ -2.11
CLN3YAL040C SEN34P39707 275 aa1.89□□□□□ -2.11
CLN3YAL040C YIL024CP40543 189 aa1.89□□□□□ -2.11
CLN3YAL040C EGT2P42835 1041 aa1.89□□□□□ -2.11
CLN3YAL040C LSM1P47017 172 aaKnown RBP1.89□□□□□ -2.11
CLN3YAL040C YJR012CP47087 207 aa1.89□□□□□ -2.11
CLN3YAL040C YIP3P53633 176 aa1.89□□□□□ -2.11
CLN3YAL040C CWC25P53854 179 aaKnown RBP1.89□□□□□ -2.11
CLN3YAL040C DID2P69771 204 aa1.89□□□□□ -2.11
CLN3YAL040C YMR279CQ03263 540 aa1.89□□□□□ -2.11
CLN3YAL040C THI74Q04083 370 aa1.89□□□□□ -2.11
CLN3YAL040C YDR391CQ04170 232 aa1.89□□□□□ -2.11
CLN3YAL040C CTR3Q06686 241 aa1.89□□□□□ -2.11
CLN3YAL040C SCP1Q08873 200 aa1.89□□□□□ -2.11
CLN3YAL040C YCT1Q12235 531 aa1.89□□□□□ -2.11
CLN3YAL040C UTP23Q12339 254 aaKnown RBP1.89□□□□□ -2.11
CLN3YAL040C RTR2Q12378 196 aa1.89□□□□□ -2.11
CLN3YAL040C RPL25P04456 142 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C RPL39P04650 51 aa1.88□□□□□ -2.11
CLN3YAL040C QCR2P07257 368 aa1.88□□□□□ -2.11
CLN3YAL040C SPS100P13130 326 aa1.88□□□□□ -2.11
CLN3YAL040C MAG1P22134 296 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C BPH1P25356 2167 aa1.88□□□□□ -2.11
CLN3YAL040C EMP24P32803 203 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C RPB7P34087 171 aa1.88□□□□□ -2.11
CLN3YAL040C POP7P38291 140 aa1.88□□□□□ -2.11
CLN3YAL040C AME1P38313 324 aa1.88□□□□□ -2.11
CLN3YAL040C YER121WP40076 114 aa1.88□□□□□ -2.11
CLN3YAL040C DFG10P40526 253 aa1.88□□□□□ -2.11
CLN3YAL040C GNA1P43577 159 aaPredicted RBP1.88□□□□□ -2.11
CLN3YAL040C GON7P46984 123 aa1.88□□□□□ -2.11
CLN3YAL040C SNX4P47057 423 aa1.88□□□□□ -2.11
CLN3YAL040C HCH1P53834 153 aa1.88□□□□□ -2.11
CLN3YAL040C YNL234WP53857 426 aa1.88□□□□□ -2.11
CLN3YAL040C CRZ1P53968 678 aa1.88□□□□□ -2.11
CLN3YAL040C SUR7P54003 302 aa1.88□□□□□ -2.11
CLN3YAL040C VPS28Q02767 242 aa1.88□□□□□ -2.11
CLN3YAL040C YMR166CQ03829 368 aa1.88□□□□□ -2.11
CLN3YAL040C PIN3Q06449 215 aa1.88□□□□□ -2.11
CLN3YAL040C ANT1Q06497 328 aa1.88□□□□□ -2.11
CLN3YAL040C RFU1Q08003 200 aa1.88□□□□□ -2.11
CLN3YAL040C YOL024WQ08172 172 aa1.88□□□□□ -2.11
CLN3YAL040C USB1Q12208 290 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C FRE8Q12209 686 aa1.88□□□□□ -2.11
CLN3YAL040C PRM4Q12498 284 aa1.88□□□□□ -2.11
CLN3YAL040C HUG1Q6Q5K6 68 aa1.88□□□□□ -2.11
CLN3YAL040C IFM1P25038 676 aa1.88□□□□□ -2.11
CLN3YAL040C RPL16AP26784 199 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C QRI5P32344 111 aa1.88□□□□□ -2.11
CLN3YAL040C SPT4P32914 102 aaPredicted RBP1.88□□□□□ -2.11
CLN3YAL040C NTF2P33331 125 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C NAT2P37293 288 aa1.88□□□□□ -2.11
CLN3YAL040C YBR096WP38256 230 aa1.88□□□□□ -2.11
CLN3YAL040C YPC1P38298 316 aa1.88□□□□□ -2.11
CLN3YAL040C SHG1P38337 142 aa1.88□□□□□ -2.11
CLN3YAL040C YHL037CP38733 133 aa1.88□□□□□ -2.11
CLN3YAL040C LSM12P38828 187 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C CTR2P38865 189 aa1.88□□□□□ -2.11
CLN3YAL040C GCV3P39726 170 aaPredicted RBP1.88□□□□□ -2.11
CLN3YAL040C PTI1P39927 425 aaPredicted RBP1.88□□□□□ -2.11
CLN3YAL040C RMD6P39975 231 aa1.88□□□□□ -2.11
CLN3YAL040C YMR144WP40214 342 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C BMT5P40493 336 aa1.88□□□□□ -2.11
CLN3YAL040C WWM1P43582 211 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C XPT1P47165 209 aa1.88□□□□□ -2.11
CLN3YAL040C SOL1P50278 321 aa1.88□□□□□ -2.11
CLN3YAL040C YGL262WP53054 175 aa1.88□□□□□ -2.11
CLN3YAL040C ACT1P60010 375 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C SED1Q01589 338 aa1.88□□□□□ -2.11
CLN3YAL040C YPR098CQ06089 161 aa1.88□□□□□ -2.11
CLN3YAL040C RRS1Q08746 203 aaKnown RBP1.88□□□□□ -2.11
CLN3YAL040C FCY22Q12119 530 aa1.88□□□□□ -2.11
CLN3YAL040C SNU23Q12368 194 aaPredicted RBP1.88□□□□□ -2.11
CLN3YAL040C ATG5Q12380 294 aa1.88□□□□□ -2.11
CLN3YAL040C YLR146W-AQ2V2P1 62 aa1.88□□□□□ -2.11
CLN3YAL040C YPR108W-AQ3E7B3 70 aa1.88□□□□□ -2.11
CLN3YAL040C YCR024C-BQ3E7Z8 88 aa1.88□□□□□ -2.11
CLN3YAL040C COA2Q3E823 68 aa1.88□□□□□ -2.11
CLN3YAL040C YLR365WQ7LIF2 110 aa1.88□□□□□ -2.11
CLN3YAL040C RPL28P02406 149 aaKnown RBP1.87□□□□□ -2.11
CLN3YAL040C RPS23AP0CX29 145 aaKnown RBP1.87□□□□□ -2.11
CLN3YAL040C RPS23BP0CX30 145 aa1.87□□□□□ -2.11
CLN3YAL040C YER190C-BP0CX94 160 aa1.87□□□□□ -2.11
CLN3YAL040C YEL077W-AP0CX95 160 aa1.87□□□□□ -2.11
CLN3YAL040C YGR296C-BP0CX96 160 aa1.87□□□□□ -2.11
CLN3YAL040C YPL283W-BP0CX97 160 aa1.87□□□□□ -2.11
CLN3YAL040C YPR204C-AP0CX98 160 aa1.87□□□□□ -2.11
CLN3YAL040C AVT5P38176 459 aa1.87□□□□□ -2.11
CLN3YAL040C YBR220CP38318 560 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 113.8 ms