RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 ORC1Q13415 861 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 GLE1Q53GS7 698 aaKnown RBP17.6■□□□□ 0.41
PKD1-225ENST00000562297 LIN9Q5TKA1 542 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 PKNOX2Q96KN3 472 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 APOL6Q9BWW8 343 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 FAM53CQ9NYF3 392 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 IPPQ9Y573 584 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 PCDHA3Q9Y5H8 950 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 TRPV2Q9Y5S1 764 aa17.6■□□□□ 0.41
PKD1-225ENST00000562297 SMIM28A0A1B0GU29 152 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 FGGP02679 453 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 HMGCRP04035 888 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 KCNE1P15382 129 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
PKD1-225ENST00000562297 MGAT3Q09327 533 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 C8orf74Q6P047 294 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 DENND1BQ6P3S1 775 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 UBL4BQ8N7F7 174 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 TMEM35BQ8NCS4 154 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 ARRDC4Q8NCT1 418 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 RUBCNQ92622 972 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 KRT12Q99456 494 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 FUT8Q9BYC5 575 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 ZMYND15Q9H091 742 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 RNF19AQ9NV58 838 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 BARX2Q9UMQ3 279 aaPredicted RBP17.59■□□□□ 0.41
PKD1-225ENST00000562297 FRMPD3Q5JV73 1810 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 SASH3O75995 380 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 MYBL2P10244 700 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 ITGA4P13612 1032 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 CD19P15391 556 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 APLP1P51693 650 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 TNNC1P63316 161 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 SLC7A5Q01650 507 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 ZNF211Q13398 564 aaPredicted RBP17.59■□□□□ 0.41
PKD1-225ENST00000562297 FAM47CQ5HY64 1035 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 LRRC52Q8N7C0 313 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 BEST2Q8NFU1 509 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 AP1M1Q9BXS5 423 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 MRPL47Q9HD33 250 aaKnown RBP17.59■□□□□ 0.41
PKD1-225ENST00000562297 KLK14Q9P0G3 267 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 STIM2Q9P246 746 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 CYTH4Q9UIA0 394 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 UBQLN1Q9UMX0 589 aaKnown RBP17.59■□□□□ 0.41
PKD1-225ENST00000562297 L1RE1Q9UN81 338 aa17.59■□□□□ 0.41
PKD1-225ENST00000562297 CCDC66A2RUB6 948 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 SPOPO43791 374 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 ERLIN1O75477 346 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 MCM3P25205 808 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 MYO1EQ12965 1108 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 AADACL2Q6P093 401 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 RSPH3Q86UC2 560 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 PARVAQ9NVD7 372 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 NR2E1Q9Y466 385 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 SCINQ9Y6U3 715 aa17.58■□□□□ 0.4
PKD1-225ENST00000562297 M0QZ92 97 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 MYO1FO00160 1098 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 PIRO00625 290 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 ATP8B1O43520 1251 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 CALB1P05937 261 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 CTSHP09668 335 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 CCNI2Q6ZMN8 369 aaPredicted RBP17.57■□□□□ 0.4
PKD1-225ENST00000562297 KRT222Q8N1A0 295 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 TTC39CQ8N584 583 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 TSPAN18Q96SJ8 248 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 HINFPQ9BQA5 517 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 DDX20Q9UHI6 824 aaKnown RBP17.57■□□□□ 0.4
PKD1-225ENST00000562297 ST3GAL5Q9UNP4 418 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 CCDC188H7C350 402 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 KRIT1O00522 736 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 MED7O43513 233 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 PROSCO94903 275 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 GJB6O95452 261 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 GLI1P08151 1106 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 HOXD10P28358 340 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 NDST1P52848 882 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 PTPN20Q4JDL3 420 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 PPP1R15BQ5SWA1 713 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 TWF2Q6IBS0 349 aaKnown RBP17.57■□□□□ 0.4
PKD1-225ENST00000562297 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.57■□□□□ 0.4
PKD1-225ENST00000562297 NME7Q9Y5B8 376 aa17.57■□□□□ 0.4
PKD1-225ENST00000562297 O00370 1275 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 RAD51CO43502 376 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 PYGMP11217 842 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 SLC1A1P43005 524 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 RPL7AP62424 266 aaKnown RBP17.56■□□□□ 0.4
PKD1-225ENST00000562297 SOX4Q06945 474 aaPredicted RBP17.56■□□□□ 0.4
PKD1-225ENST00000562297 PCSK9Q8NBP7 692 aaKnown RBP17.56■□□□□ 0.4
PKD1-225ENST00000562297 PXYLP1Q8TE99 480 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 DDX47Q9H0S4 455 aaKnown RBP17.56■□□□□ 0.4
PKD1-225ENST00000562297 PARP2Q9UGN5 583 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 CEP83Q9Y592 693 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 SNX9Q9Y5X1 595 aa17.56■□□□□ 0.4
PKD1-225ENST00000562297 TMEM191CA6NGB0 347 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms