RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 FAM193AP78312 1265 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 ATP8B2P98198 1209 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 HGFACQ04756 655 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 PICALMQ13492 652 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 SEMA5AQ13591 1074 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 TBR1Q16650 682 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 THEMIS2Q5TEJ8 643 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 MCTP2Q6DN12 878 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 TRMT2AQ8IZ69 625 aaKnown RBP7.56□□□□□ -1.2
PCM1-216ENST00000522777 PQLC1Q8N2U9 271 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 IFI44Q8TCB0 444 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 ADAMTS17Q8TE56 1095 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 CLPTM1LQ96KA5 538 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 TDP1Q9NUW8 608 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 HDAC9Q9UKV0 1011 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
PCM1-216ENST00000522777 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 COL4A5P29400 1685 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 NPC1L1Q9UHC9 1359 aa7.56□□□□□ -1.2
PCM1-216ENST00000522777 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 TCAF2A6NFQ2 919 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 WNT10BO00744 389 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 TCERG1O14776 1098 aaKnown RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 ITGA10O75578 1167 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 CYP1A1P04798 512 aaPredicted RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 CRHR1P34998 444 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 PIP4K2AP48426 406 aaPredicted RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 RAB1AP62820 205 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 CXCL9Q07325 125 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 CRY2Q49AN0 593 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 TP53I13Q8NBR0 393 aaPredicted RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 GCDHQ92947 438 aaPredicted RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 STRBPQ96SI9 672 aaKnown RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 PTPN18Q99952 460 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 VPS33BQ9H267 617 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 BARX1Q9HBU1 254 aaPredicted RBP7.55□□□□□ -1.2
PCM1-216ENST00000522777 FAM184BQ9ULE4 1060 aa7.55□□□□□ -1.2
PCM1-216ENST00000522777 BCORQ6W2J9 1755 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 A0A088AWK7 358 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 CAPN8A6NHC0 703 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 RFXAPO00287 272 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 RPLP2P05387 115 aaKnown RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 VSIG10L2P0DP72 767 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 SYN1P17600 705 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 ADCY7P51828 1080 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 LINC00310P59036 64 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 NKX6-1P78426 367 aaPredicted RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 TLE1Q04724 770 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 TNIP1Q15025 636 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 CNN3Q15417 329 aaKnown RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 KIAA0753Q2KHM9 967 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 ZMAT1Q5H9K5 638 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 USP30Q70CQ3 517 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 SUPT20HQ8NEM7 779 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 RBM17Q96I25 401 aaKnown RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 CDK5RAP3Q96JB5 506 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 NAA15Q9BXJ9 866 aaKnown RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 LDAHQ9H6V9 325 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 GBA2Q9HCG7 927 aaPredicted RBP7.54□□□□□ -1.2
PCM1-216ENST00000522777 LANCL2Q9NS86 450 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 PCDHGB6Q9Y5F9 930 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 USP16Q9Y5T5 823 aa7.54□□□□□ -1.2
PCM1-216ENST00000522777 FARP2O94887 1054 aaPredicted RBP7.53□□□□□ -1.2
PCM1-216ENST00000522777 TSPAN15O95858 294 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 GASTP01350 101 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 GYPEP15421 78 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 PCSK1P29120 753 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 PER3P56645 1201 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 ZNF280AP59817 542 aaPredicted RBP7.53□□□□□ -1.2
PCM1-216ENST00000522777 MTM1Q13496 603 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 NFYCQ13952 458 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 RAB39AQ14964 217 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 ACAP1Q15027 740 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 BRD3Q15059 726 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 KHDC1Q4VXA5 237 aaKnown RBP7.53□□□□□ -1.2
PCM1-216ENST00000522777 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 DAAM2Q86T65 1068 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 C3orf20Q8ND61 904 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 REPS2Q8NFH8 660 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 IL17REQ8NFR9 667 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 CYFIP2Q96F07 1278 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 TMX3Q96JJ7 454 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 NT5C1BQ96P26 610 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 CRAMP1Q96RY5 1269 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 UHRF1Q96T88 793 aaPredicted RBP7.53□□□□□ -1.2
PCM1-216ENST00000522777 SLC6A15Q9H2J7 730 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 PANK3Q9H999 370 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 ATP6V0A4Q9HBG4 840 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 JADE2Q9NQC1 790 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 CALCOCO1Q9P1Z2 691 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 CNOT7Q9UIV1 285 aaKnown RBP7.53□□□□□ -1.2
PCM1-216ENST00000522777 PHTF1Q9UMS5 762 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 POLHQ9Y253 713 aa7.53□□□□□ -1.2
PCM1-216ENST00000522777 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.2
PCM1-216ENST00000522777 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms