RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 SHISA5Q8N114 240 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 FAM177A1Q8N128 213 aaPredicted RBP5.49□□□□□ -1.53
HTT-211ENST00000513326 MFSD4AQ8N468 514 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 MTMR8Q96EF0 704 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 RCC1LQ96I51 464 aaKnown RBP5.49□□□□□ -1.53
HTT-211ENST00000513326 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 Q96M66 194 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 CASD1Q96PB1 797 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 MYADMQ96S97 322 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 SPATA9Q9BWV2 254 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 OSBPL1AQ9BXW6 950 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 PRDM14Q9GZV8 571 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 SEMA4AQ9H3S1 761 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 ZNF215Q9UL58 517 aaPredicted RBP5.49□□□□□ -1.53
HTT-211ENST00000513326 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 LZTS1Q9Y250 596 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 MTF2Q9Y483 593 aaPredicted RBP5.49□□□□□ -1.53
HTT-211ENST00000513326 PCDHB7Q9Y5E2 793 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 PCDHA1Q9Y5I3 950 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.49□□□□□ -1.53
HTT-211ENST00000513326 CAPN6Q9Y6Q1 641 aa5.49□□□□□ -1.53
HTT-211ENST00000513326 SETXQ7Z333 2677 aaKnown RBP5.49□□□□□ -1.53
HTT-211ENST00000513326 FRMPD4Q14CM0 1322 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 PATJQ8NI35 1801 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 ZZEF1O43149 2961 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 WDR64B1ANS9 1081 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 MSTNO14793 375 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 FIBPO43427 364 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 PROCP04070 461 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 SRGAP2BP0DMP2 458 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 TGFB3P10600 412 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 KCNA2P16389 499 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 LAG3P18627 525 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 METAP2P50579 478 aaKnown RBP eCLIP5.48□□□□□ -1.53
HTT-211ENST00000513326 ZNF445P59923 1031 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 SMC1AQ14683 1233 aaKnown RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 ACAP1Q15027 740 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 LPAL2Q16609 132 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 C2orf27AQ580R0 203 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 NKAPLQ5M9Q1 402 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 ATAT1Q5SQI0 421 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 C20orf194Q5TEA3 1177 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 XRRA1Q6P2D8 792 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 POMZP3Q6PJE2 187 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 GPR149Q86SP6 731 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 FAM228AQ86W67 206 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 HOMER1Q86YM7 354 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 SLC39A11Q8N1S5 342 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 ZNF513Q8N8E2 541 aaPredicted RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 ENAHQ8N8S7 591 aaPredicted RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 LRRN4CLQ8ND94 238 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 BVESQ8NE79 360 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 SHKBP1Q8TBC3 707 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 ENOX1Q8TC92 643 aaKnown RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 PPP1R14AQ96A00 147 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 PIGSQ96S52 555 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 SPOCK3Q9BQ16 436 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 RPP25Q9BUL9 199 aaKnown RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 AMNQ9BXJ7 453 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 FTHL17Q9BXU8 183 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 CELF4Q9BZC1 486 aaKnown RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 NGRNQ9NPE2 291 aaKnown RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 NCDNQ9UBB6 729 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 APEX2Q9UBZ4 518 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 USP18Q9UMW8 372 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 ST3GAL5Q9UNP4 418 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 SMG5Q9UPR3 1016 aaKnown RBP5.48□□□□□ -1.53
HTT-211ENST00000513326 FHOD1Q9Y613 1164 aa5.48□□□□□ -1.53
HTT-211ENST00000513326 DOCK6Q96HP0 2047 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 FSD2A1L4K1 749 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 B4E1Z4 1266 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 GCOM1H8Y6P7 765 aaPredicted RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 ZBTB5O15062 677 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 SIGLEC6O43699 453 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 CYTH3O43739 400 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 KINO60870 393 aaKnown RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 CXCL14O95715 111 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ITGAVP06756 1048 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 POLR2MP0CAP2 368 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 HSD3B2P26439 372 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 OXCT1P55809 520 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 TNK2Q07912 1038 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 NMIQ13287 307 aaPredicted RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 SNW1Q13573 536 aaKnown RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 NEDD9Q14511 834 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ALX1Q15699 326 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 KIZQ2M2Z5 673 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ASPRV1Q53RT3 343 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 ZC3H12BQ5HYM0 836 aaKnown RBP5.47□□□□□ -1.53
HTT-211ENST00000513326 USP17L6PQ6QN14 398 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 CCDC149Q6ZUS6 474 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 SLC24A5Q71RS6 500 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 OTOP3Q7RTS5 596 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 RSPH3Q86UC2 560 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 VPS52Q8N1B4 723 aa5.47□□□□□ -1.53
HTT-211ENST00000513326 SLC44A3Q8N4M1 653 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms