RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
HTT-211ENST00000513326 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
HTT-211ENST00000513326 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
HTT-211ENST00000513326 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
HTT-211ENST00000513326 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
HTT-211ENST00000513326 FOXD1Q16676 465 aa13.26□□□□□ -0.29
HTT-211ENST00000513326 ADRA2BP18089 450 aa12.98□□□□□ -0.33
HTT-211ENST00000513326 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
HTT-211ENST00000513326 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
HTT-211ENST00000513326 NISCHQ9Y2I1 1504 aa12.5□□□□□ -0.41
HTT-211ENST00000513326 KCNA4P22459 653 aa12.23□□□□□ -0.45
HTT-211ENST00000513326 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
HTT-211ENST00000513326 MSH5O43196 834 aa12.15□□□□□ -0.46
HTT-211ENST00000513326 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
HTT-211ENST00000513326 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
HTT-211ENST00000513326 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
HTT-211ENST00000513326 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
HTT-211ENST00000513326 ABCC9O60706 1549 aa11.75□□□□□ -0.53
HTT-211ENST00000513326 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
HTT-211ENST00000513326 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
HTT-211ENST00000513326 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
HTT-211ENST00000513326 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
HTT-211ENST00000513326 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
HTT-211ENST00000513326 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
HTT-211ENST00000513326 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
HTT-211ENST00000513326 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
HTT-211ENST00000513326 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
HTT-211ENST00000513326 ZBTB22O15209 634 aa11.25□□□□□ -0.61
HTT-211ENST00000513326 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
HTT-211ENST00000513326 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
HTT-211ENST00000513326 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
HTT-211ENST00000513326 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
HTT-211ENST00000513326 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
HTT-211ENST00000513326 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
HTT-211ENST00000513326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
HTT-211ENST00000513326 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
HTT-211ENST00000513326 UNC13AQ9UPW8 1703 aa10.78□□□□□ -0.68
HTT-211ENST00000513326 NACADO15069 1562 aa10.77□□□□□ -0.68
HTT-211ENST00000513326 BICRAQ9NZM4 1560 aa10.73□□□□□ -0.69
HTT-211ENST00000513326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
HTT-211ENST00000513326 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
HTT-211ENST00000513326 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
HTT-211ENST00000513326 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
HTT-211ENST00000513326 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
HTT-211ENST00000513326 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
HTT-211ENST00000513326 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
HTT-211ENST00000513326 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
HTT-211ENST00000513326 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
HTT-211ENST00000513326 APLP2Q06481 763 aa10.53□□□□□ -0.72
HTT-211ENST00000513326 POTEDQ86YR6 584 aa10.51□□□□□ -0.73
HTT-211ENST00000513326 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
HTT-211ENST00000513326 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
HTT-211ENST00000513326 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
HTT-211ENST00000513326 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
HTT-211ENST00000513326 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
HTT-211ENST00000513326 SCRIBQ14160 1630 aa10.39□□□□□ -0.75
HTT-211ENST00000513326 C1QBPQ07021 282 aaKnown RBP10.33□□□□□ -0.76
HTT-211ENST00000513326 FKBP8Q14318 412 aa10.32□□□□□ -0.76
HTT-211ENST00000513326 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
HTT-211ENST00000513326 SPINK5Q9NQ38 1064 aaPredicted RBP10.29□□□□□ -0.76
HTT-211ENST00000513326 TRHP20396 242 aaPredicted RBP10.26□□□□□ -0.77
HTT-211ENST00000513326 CAPN15O75808 1086 aa10.25□□□□□ -0.77
HTT-211ENST00000513326 DCAF1Q9Y4B6 1507 aa10.24□□□□□ -0.77
HTT-211ENST00000513326 POLA2Q14181 598 aa10.18□□□□□ -0.78
HTT-211ENST00000513326 CUX2O14529 1486 aa10.17□□□□□ -0.78
HTT-211ENST00000513326 FBLN2P98095 1184 aa10.13□□□□□ -0.79
HTT-211ENST00000513326 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
HTT-211ENST00000513326 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
HTT-211ENST00000513326 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
HTT-211ENST00000513326 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
HTT-211ENST00000513326 ABCB7O75027 752 aa10.05□□□□□ -0.8
HTT-211ENST00000513326 NESP48681 1621 aa10.03□□□□□ -0.8
HTT-211ENST00000513326 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
HTT-211ENST00000513326 DSG3P32926 999 aa10.01□□□□□ -0.81
HTT-211ENST00000513326 NCAPD3P42695 1498 aa9.98□□□□□ -0.81
HTT-211ENST00000513326 THOC2Q8NI27 1593 aaKnown RBP9.96□□□□□ -0.82
HTT-211ENST00000513326 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
HTT-211ENST00000513326 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
HTT-211ENST00000513326 CACNB1Q02641 598 aaPredicted RBP9.93□□□□□ -0.82
HTT-211ENST00000513326 PROM2Q8N271 834 aa9.93□□□□□ -0.82
HTT-211ENST00000513326 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
HTT-211ENST00000513326 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
HTT-211ENST00000513326 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
HTT-211ENST00000513326 HMGXB3Q12766 1538 aa9.87□□□□□ -0.83
HTT-211ENST00000513326 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
HTT-211ENST00000513326 SMARCA4P51532 1647 aa9.84□□□□□ -0.83
HTT-211ENST00000513326 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
HTT-211ENST00000513326 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
HTT-211ENST00000513326 SPDYE2Q495Y8 402 aa9.8□□□□□ -0.84
HTT-211ENST00000513326 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
HTT-211ENST00000513326 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
HTT-211ENST00000513326 BAZ1BQ9UIG0 1483 aaKnown RBP9.79□□□□□ -0.84
HTT-211ENST00000513326 LAMC3Q9Y6N6 1575 aa9.78□□□□□ -0.84
HTT-211ENST00000513326 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
HTT-211ENST00000513326 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
HTT-211ENST00000513326 BAZ1AQ9NRL2 1556 aaPredicted RBP9.73□□□□□ -0.85
HTT-211ENST00000513326 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
HTT-211ENST00000513326 WDR62O43379 1518 aa9.72□□□□□ -0.85
HTT-211ENST00000513326 PDS5BQ9NTI5 1447 aa9.71□□□□□ -0.86
HTT-211ENST00000513326 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms