RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 CTXN3Q4LDR2 81 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 PEAR1Q5VY43 1037 aaPredicted RBP12.37□□□□□ -0.43
COMMD2-202ENST00000469896 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 GPR155Q7Z3F1 870 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 GLRX5Q86SX6 157 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 TTC30AQ86WT1 665 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 MDGA1Q8NFP4 955 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 TBC1D32Q96NH3 1257 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 MTRQ99707 1265 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
COMMD2-202ENST00000469896 EBF3Q9H4W6 596 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 CAPN10Q9HC96 672 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 FSCN3Q9NQT6 498 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 FBXL5Q9UKA1 691 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 YIPF1Q9Y548 306 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
COMMD2-202ENST00000469896 GON4LQ3T8J9 2241 aa12.37□□□□□ -0.43
COMMD2-202ENST00000469896 COL6A6A6NMZ7 2263 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 ESYT2A0FGR8 921 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 TBX3O15119 743 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 MARCH6O60337 910 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 PRAMEF12O95522 483 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 CPB1P15086 417 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 ITPKAP23677 461 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 ALDH1A3P47895 512 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 UPP1Q16831 310 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 TMEM132AQ24JP5 1023 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
COMMD2-202ENST00000469896 CC2D1AQ6P1N0 951 aaPredicted RBP12.36□□□□□ -0.43
COMMD2-202ENST00000469896 TMC8Q8IU68 726 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 FAM181AQ8N9Y4 354 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 DAGLBQ8NCG7 672 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 FAM83CQ9BQN1 747 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 NFKBIZQ9BYH8 718 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
COMMD2-202ENST00000469896 E9PAM4 449 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 AP5Z1O43299 807 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 ITPKBP27987 946 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 P2RY2P41231 377 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 BRCC3P46736 316 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 USP11P51784 963 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 SLCO6A1Q86UG4 719 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 OLIG1Q8TAK6 271 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 GJA10Q969M2 543 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 PI4K2AQ9BTU6 479 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 LRRC3Q9BY71 257 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 TASP1Q9H6P5 420 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 FBRSL1Q9HCM7 1045 aaKnown RBP12.35□□□□□ -0.43
COMMD2-202ENST00000469896 HPS4Q9NQG7 708 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 BCCIPQ9P287 314 aaKnown RBP eCLIP12.35□□□□□ -0.43
COMMD2-202ENST00000469896 ZMYM5Q9UJ78 669 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 ASB3Q9Y575 518 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 TAF6LQ9Y6J9 622 aa12.35□□□□□ -0.43
COMMD2-202ENST00000469896 ERVH48-1M5A8F1 160 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 N4BP3O15049 544 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 HLA-EP13747 358 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 GABRR2P28476 465 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 YWHABP31946 246 aaKnown RBP12.34□□□□□ -0.43
COMMD2-202ENST00000469896 PDGFRLQ15198 375 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 ITIH5Q86UX2 942 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 APPL2Q8NEU8 664 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 CD101Q93033 1021 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 CHFRQ96EP1 664 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 ARID3AQ99856 593 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 PLXNB3Q9ULL4 1909 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 NOTCH2Q04721 2471 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 PI4KAP42356 2102 aa12.34□□□□□ -0.43
COMMD2-202ENST00000469896 ATG2BQ96BY7 2078 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 COL12A1Q99715 3063 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 OTOL1A6NHN0 477 aaPredicted RBP12.33□□□□□ -0.44
COMMD2-202ENST00000469896 B8ZZF3 427 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.44
COMMD2-202ENST00000469896 AVPR1AP37288 418 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 BFSP1Q12934 665 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 CAPSQ13938 189 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 CRY1Q16526 586 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 RTN1Q16799 776 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 Q4G0T1 1027 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 GLRA4Q5JXX5 417 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 TRIM68Q6AZZ1 485 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 PPP4R3AQ6IN85 833 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 GAREM2Q75VX8 874 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 C3orf58Q8NDZ4 430 aa12.33□□□□□ -0.44
COMMD2-202ENST00000469896 SETD7Q8WTS6 366 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms