RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 EIF3JO75822 258 aaKnown RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 NBPF7P0C2Y1 421 aaPredicted RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 PEX2P28328 305 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 PTPN7P35236 360 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 ARFIP2P53365 341 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 AK2P54819 239 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 PER3P56645 1201 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 PROK1P58294 105 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 TP53BP2Q13625 1128 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 FGL2Q14314 439 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 PLS1Q14651 629 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 CNN3Q15417 329 aaKnown RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 KIAA0753Q2KHM9 967 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 KHDC1Q4VXA5 237 aaKnown RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 ANKS6Q68DC2 871 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 PPP4R4Q6NUP7 873 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 APOA5Q6Q788 366 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 CCDC149Q6ZUS6 474 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 SEM1Q6ZVN7 128 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 HEATR3Q7Z4Q2 680 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 APBB1IPQ7Z5R6 666 aaPredicted RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 PLXDC1Q8IUK5 500 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 SMC5Q8IY18 1101 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 DCBLD1Q8N8Z6 715 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 IL17RDQ8NFM7 739 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 ZNF384Q8TF68 577 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 LRTOMTQ8WZ04 291 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 CAVIN3Q969G5 261 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 MTFMTQ96DP5 389 aaKnown RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 SLC35A4Q96G79 324 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 CEP95Q96GE4 821 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 APIPQ96GX9 242 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 TMX3Q96JJ7 454 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 UHRF1Q96T88 793 aaPredicted RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 ELAC2Q9BQ52 826 aaKnown RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 NDC1Q9BTX1 674 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 DPH1Q9BZG8 443 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 NUP62CLQ9H1M0 184 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 LDAHQ9H6V9 325 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 LMBRD1Q9NUN5 540 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 TMEM140Q9NV12 185 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 MOCS1Q9NZB8 636 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 TRPM5Q9NZQ8 1165 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 EIF2B4Q9UI10 523 aaKnown RBP3.45□□□□□ -1.86
CD47-203ENST00000398258 HDAC5Q9UQL6 1122 aa3.45□□□□□ -1.86
CD47-203ENST00000398258 WIPF3A6NGB9 483 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 F2RL2O00254 374 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 FOXN3O00409 490 aaPredicted RBP3.44□□□□□ -1.86
CD47-203ENST00000398258 PHGDHO43175 533 aaKnown RBP3.44□□□□□ -1.86
CD47-203ENST00000398258 KCNAB3O43448 404 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 RECQL4O94761 1208 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 HKR1P10072 659 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 MYF5P13349 255 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 FPR1P21462 350 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 PRDX5P30044 214 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 NEK3P51956 506 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 KRT72Q14CN4 511 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 MFSD14BQ5SR56 506 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 ZNF425Q6IV72 752 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 DOK3Q7L591 496 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 GPRIN1Q7Z2K8 1008 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 RSPH3Q86UC2 560 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 SYT12Q8IV01 421 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 SPICE1Q8N0Z3 855 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 RNF169Q8NCN4 708 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 IL31RAQ8NI17 732 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 CCHCR1Q8TD31 782 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 STON2Q8WXE9 905 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 NELL1Q92832 810 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 PHKBQ93100 1093 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 RAB24Q969Q5 203 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 MSLNLQ96KJ4 702 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 MRGPRX1Q96LB2 322 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 VRK1Q99986 396 aaPredicted RBP3.44□□□□□ -1.86
CD47-203ENST00000398258 SENP6Q9GZR1 1112 aaPredicted RBP3.44□□□□□ -1.86
CD47-203ENST00000398258 MRPL46Q9H2W6 279 aaKnown RBP3.44□□□□□ -1.86
CD47-203ENST00000398258 ZMAT3Q9HA38 289 aaKnown RBP3.44□□□□□ -1.86
CD47-203ENST00000398258 SPON1Q9HCB6 807 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 PNPOQ9NVS9 261 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 SLC23A1Q9UHI7 598 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 TLK1Q9UKI8 766 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 PCDHA3Q9Y5H8 950 aa3.44□□□□□ -1.86
CD47-203ENST00000398258 LOC102724159A0A0B4J2E5 919 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 PRSS29PA6NIE9 313 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 PRR5-ARHGAP8B1AHC4 643 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 B5MCH6 92 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 IFIT2P09913 472 aaKnown RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 EN2P19622 333 aaPredicted RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 ALDH1A3P47895 512 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 AVPR1BP47901 424 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 CASP5P51878 434 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 SIM1P81133 766 aaPredicted RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 SCAPQ12770 1279 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 BRD3Q15059 726 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 PWP2Q15269 919 aaKnown RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 FLYWCH1Q4VC44 716 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 PABPC1LQ4VXU2 614 aaKnown RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 METTL24Q5JXM2 366 aa3.43□□□□□ -1.86
CD47-203ENST00000398258 CRELD2Q6UXH1 353 aaPredicted RBP3.43□□□□□ -1.86
CD47-203ENST00000398258 GADL1Q6ZQY3 521 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms