RNA–Protein interactions for RNA: YPR087W

VPS69, Transcript of Dubious open reading frame, yeastyeast

Gene VPS69, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS69YPR087W MED4Q12343 284 aa3.55□□□□□ -1.84
VPS69YPR087W EAF3Q12432 401 aa3.55□□□□□ -1.84
VPS69YPR087W AIM45Q12480 344 aaKnown RBP3.55□□□□□ -1.84
VPS69YPR087W UBA3Q99344 299 aa3.55□□□□□ -1.84
VPS69YPR087W RPL15AP05748 204 aaKnown RBP3.54□□□□□ -1.84
VPS69YPR087W CKS1P20486 150 aaKnown RBP3.54□□□□□ -1.84
VPS69YPR087W TRR1P29509 319 aaKnown RBP3.54□□□□□ -1.84
VPS69YPR087W AGA2P32781 87 aa3.54□□□□□ -1.84
VPS69YPR087W MIX23P38162 196 aa3.54□□□□□ -1.84
VPS69YPR087W YBR220CP38318 560 aa3.54□□□□□ -1.84
VPS69YPR087W PRS2P38620 318 aaKnown RBP3.54□□□□□ -1.84
VPS69YPR087W COS8P38723 381 aa3.54□□□□□ -1.84
VPS69YPR087W BFR1P38934 470 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
VPS69YPR087W CCS1P40202 249 aaKnown RBP3.54□□□□□ -1.84
VPS69YPR087W SWM2P40342 146 aa3.54□□□□□ -1.84
VPS69YPR087W SIM1P40472 476 aa3.54□□□□□ -1.84
VPS69YPR087W YGR210CP42942 411 aa3.54□□□□□ -1.84
VPS69YPR087W WWM1P43582 211 aaKnown RBP3.54□□□□□ -1.84
VPS69YPR087W NCA3P46955 337 aa3.54□□□□□ -1.84
VPS69YPR087W MRX5P47007 382 aa3.54□□□□□ -1.84
VPS69YPR087W CRZ1P53968 678 aa3.54□□□□□ -1.84
VPS69YPR087W RTT103Q05543 409 aa3.54□□□□□ -1.84
VPS69YPR087W COA4Q05809 96 aa3.54□□□□□ -1.84
VPS69YPR087W RRG8Q06109 277 aa3.54□□□□□ -1.84
VPS69YPR087W YNG1Q08465 219 aa3.54□□□□□ -1.84
VPS69YPR087W RPS23AP0CX29 145 aaKnown RBP3.53□□□□□ -1.84
VPS69YPR087W RPS23BP0CX30 145 aa3.53□□□□□ -1.84
VPS69YPR087W MRS3P10566 314 aa3.53□□□□□ -1.84
VPS69YPR087W MIR1P23641 311 aaKnown RBP3.53□□□□□ -1.84
VPS69YPR087W IMP1P28627 190 aa3.53□□□□□ -1.84
VPS69YPR087W OCH1P31755 480 aa3.53□□□□□ -1.84
VPS69YPR087W YPS1P32329 569 aa3.53□□□□□ -1.84
VPS69YPR087W YPC1P38298 316 aa3.53□□□□□ -1.84
VPS69YPR087W YMR144WP40214 342 aaKnown RBP3.53□□□□□ -1.84
VPS69YPR087W RPR2P40571 144 aa3.53□□□□□ -1.84
VPS69YPR087W YJL213WP40896 331 aa3.53□□□□□ -1.84
VPS69YPR087W YDL186WP48568 277 aa3.53□□□□□ -1.84
VPS69YPR087W NIF3P53081 288 aa3.53□□□□□ -1.84
VPS69YPR087W PNC1P53184 216 aaKnown RBP3.53□□□□□ -1.84
VPS69YPR087W ORM1P53224 222 aa3.53□□□□□ -1.84
VPS69YPR087W SLX9P53251 210 aaPredicted RBP3.53□□□□□ -1.84
VPS69YPR087W YPL067CQ02754 198 aa3.53□□□□□ -1.84
VPS69YPR087W PRM15Q03262 622 aa3.53□□□□□ -1.84
VPS69YPR087W UPS1Q05776 175 aa3.53□□□□□ -1.84
VPS69YPR087W MPD1Q12404 318 aaKnown RBP3.53□□□□□ -1.84
VPS69YPR087W YLR365WQ7LIF2 110 aa3.53□□□□□ -1.84
VPS69YPR087W ATG40Q99325 256 aa3.53□□□□□ -1.84
VPS69YPR087W TPI1P00942 248 aaKnown RBP3.52□□□□□ -1.85
VPS69YPR087W PIS1P06197 220 aaKnown RBP3.52□□□□□ -1.85
VPS69YPR087W SEN2P16658 377 aa3.52□□□□□ -1.85
VPS69YPR087W FUS3P16892 353 aaKnown RBP3.52□□□□□ -1.85
VPS69YPR087W MAG1P22134 296 aaKnown RBP3.52□□□□□ -1.85
VPS69YPR087W RPB7P34087 171 aa3.52□□□□□ -1.85
VPS69YPR087W SWD3P38123 315 aa3.52□□□□□ -1.85
VPS69YPR087W PRS3P38689 320 aaKnown RBP3.52□□□□□ -1.85
VPS69YPR087W BMT5P40493 336 aa3.52□□□□□ -1.85
VPS69YPR087W LOC1P43586 204 aaPredicted RBP3.52□□□□□ -1.85
VPS69YPR087W SOL1P50278 321 aa3.52□□□□□ -1.85
VPS69YPR087W RIB4P50861 169 aaPredicted RBP3.52□□□□□ -1.85
VPS69YPR087W YMR279CQ03263 540 aa3.52□□□□□ -1.85
VPS69YPR087W THI74Q04083 370 aa3.52□□□□□ -1.85
VPS69YPR087W FEX2Q08991 375 aa3.52□□□□□ -1.85
VPS69YPR087W FCY22Q12119 530 aa3.52□□□□□ -1.85
VPS69YPR087W FRE8Q12209 686 aa3.52□□□□□ -1.85
VPS69YPR087W BBP1Q12365 385 aa3.52□□□□□ -1.85
VPS69YPR087W RTR2Q12378 196 aa3.52□□□□□ -1.85
VPS69YPR087W QCR2P07257 368 aa3.51□□□□□ -1.85
VPS69YPR087W CUP1-1P0CX80 61 aa3.51□□□□□ -1.85
VPS69YPR087W CUP1-2P0CX81 61 aa3.51□□□□□ -1.85
VPS69YPR087W TIR2P33890 251 aa3.51□□□□□ -1.85
VPS69YPR087W YOX1P34161 385 aa3.51□□□□□ -1.85
VPS69YPR087W YUH1P35127 236 aa3.51□□□□□ -1.85
VPS69YPR087W SWD2P36104 329 aaPredicted RBP3.51□□□□□ -1.85
VPS69YPR087W YGP1P38616 354 aaKnown RBP3.51□□□□□ -1.85
VPS69YPR087W RMD6P39975 231 aa3.51□□□□□ -1.85
VPS69YPR087W PRM5P40476 318 aa3.51□□□□□ -1.85
VPS69YPR087W YIR035CP40579 254 aa3.51□□□□□ -1.85
VPS69YPR087W SNX4P47057 423 aa3.51□□□□□ -1.85
VPS69YPR087W JAC1P53193 184 aa3.51□□□□□ -1.85
VPS69YPR087W LST7P53237 242 aa3.51□□□□□ -1.85
VPS69YPR087W FIT1Q04433 528 aa3.51□□□□□ -1.85
VPS69YPR087W LIP2Q06005 328 aa3.51□□□□□ -1.85
VPS69YPR087W NOC4Q06512 552 aaPredicted RBP3.51□□□□□ -1.85
VPS69YPR087W GAT3Q07928 141 aa3.51□□□□□ -1.85
VPS69YPR087W FEX1Q08913 375 aa3.51□□□□□ -1.85
VPS69YPR087W PPT2Q12036 173 aa3.51□□□□□ -1.85
VPS69YPR087W YCT1Q12235 531 aa3.51□□□□□ -1.85
VPS69YPR087W TFC7Q12415 435 aa3.51□□□□□ -1.85
VPS69YPR087W YGL194C-AQ2V2P6 80 aa3.51□□□□□ -1.85
VPS69YPR087W YPR108W-AQ3E7B3 70 aa3.51□□□□□ -1.85
VPS69YPR087W YBR298C-AQ8TGK4 73 aa3.51□□□□□ -1.85
VPS69YPR087W SSA3P09435 649 aaKnown RBP3.5□□□□□ -1.85
VPS69YPR087W RPL18AP0CX49 186 aaKnown RBP3.5□□□□□ -1.85
VPS69YPR087W RPL18BP0CX50 186 aaKnown RBP3.5□□□□□ -1.85
VPS69YPR087W TOA2P32774 122 aa3.5□□□□□ -1.85
VPS69YPR087W PDC2P32896 925 aa3.5□□□□□ -1.85
VPS69YPR087W VMA7P39111 118 aa3.5□□□□□ -1.85
VPS69YPR087W RPL13BP40212 199 aaKnown RBP3.5□□□□□ -1.85
VPS69YPR087W GON7P46984 123 aa3.5□□□□□ -1.85
VPS69YPR087W TAD2P47058 250 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms