RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	URA6	P15700	204 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	MRPS28	P21771	286 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	MRPL17	P36528	281 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	GLR1	P41921	483 aa	Known RBP	0.22	□□□□□ -2.37
SEC8	YPR055W	MCM22	P47167	239 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	DOC1	P53068	250 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
SEC8	YPR055W	YET1	P35723	206 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	UTP30	P36144	274 aa	Known RBP	0.22	□□□□□ -2.37
SEC8	YPR055W	YDR274C	P87283	123 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	CDC123	Q05791	360 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	YLR031W	Q07978	186 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	YFR032C-B	Q8TGU2	87 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	CUP1-1	P0CX80	61 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	CUP1-2	P0CX81	61 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	RPO26	P20435	155 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	TRX3	P25372	127 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	MGM101	P32787	269 aa	Known RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	ERJ5	P43613	295 aa	Predicted RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	KNH1	P50112	268 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	YNL010W	P53981	241 aa	Known RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	UBC7	Q02159	165 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	YDR248C	Q03786	193 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	RIO1	Q12196	484 aa	Known RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	BCY1	P07278	416 aa	Known RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	FES1	P38260	290 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	POP4	P38336	279 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	SBH2	P52871	88 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	SAY1	P53324	424 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	MZM1	Q03429	123 aa	Predicted RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	YPL162C	Q12042	273 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	MCP1	Q12106	302 aa		0.21	□□□□□ -2.38
SEC8	YPR055W	FAS1	P07149	2051 aa	Known RBP	0.21	□□□□□ -2.38
SEC8	YPR055W	VAR1	P02381	398 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YGL041W-A	P0C5N3	154 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YHR212W-A	P0CX91	67 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YMR31	P19955	123 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
SEC8	YPR055W	MRPL28	P36527	147 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	STT4	P37297	1900 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YER076C	P40049	302 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	COX15	P40086	486 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	FMP32	P43557	207 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	BXI1	P48558	297 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	ROM2	P51862	1356 aa	Known RBP	0.2	□□□□□ -2.38
SEC8	YPR055W	SRL4	Q03085	281 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	MED4	Q12343	284 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YNL146C-A	Q3E7Z1	64 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	KRE5	P22023	1365 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	THP2	O13539	261 aa	Known RBP	0.2	□□□□□ -2.38
SEC8	YPR055W	PTM1	P32857	523 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	TMA19	P35691	167 aa	Known RBP	0.2	□□□□□ -2.38
SEC8	YPR055W	RPL37B	P51402	88 aa	Known RBP	0.2	□□□□□ -2.38
SEC8	YPR055W	PET191	Q02772	108 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	SWP1	Q02795	286 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	KRE28	Q04431	385 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	ANT1	Q06497	328 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YOL160W	Q08321	113 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	TSC3	Q3E790	80 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	YLR236C	A0A023PZG4	107 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	RTC3	P38804	111 aa	Predicted RBP	0.2	□□□□□ -2.38
SEC8	YPR055W	YEL067C	P39978	195 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	GVP36	P40531	326 aa	Known RBP	0.2	□□□□□ -2.38
SEC8	YPR055W	SBH1	P52870	82 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	NUP84	P52891	726 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	HOP2	P53187	214 aa		0.2	□□□□□ -2.38
SEC8	YPR055W	MLP1	Q02455	1875 aa	Known RBP	0.19	□□□□□ -2.38
SEC8	YPR055W	SEC17	P32602	292 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	CLG1	P35190	452 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	CBT1	P36038	271 aa	Predicted RBP	0.19	□□□□□ -2.38
SEC8	YPR055W	YCR087C-A	P37263	153 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	UMP1	P38293	148 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	VMA22	P38784	181 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	RIO2	P40160	425 aa	Known RBP	0.19	□□□□□ -2.38
SEC8	YPR055W	YNL194C	P40169	301 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	FMC1	P40491	155 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	RPC17	P47076	161 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	ADO1	P47143	340 aa	Known RBP	0.19	□□□□□ -2.38
SEC8	YPR055W	PRM8	P53174	237 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	POP3	P53833	195 aa	Predicted RBP	0.19	□□□□□ -2.38
SEC8	YPR055W	FYV6	P53913	173 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	RAD28	Q12021	506 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	CBF1	P17106	351 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	YCL042W	P25572	119 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	SPS18	P32572	300 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	APS1	P35181	156 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	YPL073C	P40323	161 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	YGL193C	P53097	103 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	GIM3	P53900	129 aa		0.19	□□□□□ -2.38
SEC8	YPR055W	YDR157W	A0A023PZE8	133 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	ARG80	P07249	177 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	RPS28B	P0C0X0	67 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	ATP15	P21306	62 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	PPA2	P28239	310 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	PRX1	P34227	261 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	TVP38	P36164	337 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	ARP3	P47117	449 aa	Known RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	TIM13	P53299	105 aa		0.18	□□□□□ -2.38
SEC8	YPR055W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.18	□□□□□ -2.38
SEC8	YPR055W	RAD9	P14737	1309 aa		0.18	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms