RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W POP2P39008 433 aa3.76□□□□□ -1.81
SSO1YPL232W IRC18P47056 224 aa3.76□□□□□ -1.81
SSO1YPL232W GNP1P48813 663 aa3.76□□□□□ -1.81
SSO1YPL232W ARO8P53090 500 aaKnown RBP3.76□□□□□ -1.81
SSO1YPL232W STP4Q07351 490 aa3.76□□□□□ -1.81
SSO1YPL232W HIS3P06633 220 aa3.75□□□□□ -1.81
SSO1YPL232W RIB7P33312 244 aa3.75□□□□□ -1.81
SSO1YPL232W POR2P40478 281 aa3.75□□□□□ -1.81
SSO1YPL232W MSS2P40990 351 aa3.75□□□□□ -1.81
SSO1YPL232W RPA34P47006 233 aaPredicted RBP3.75□□□□□ -1.81
SSO1YPL232W YAE1P47118 141 aaPredicted RBP3.75□□□□□ -1.81
SSO1YPL232W SSU72P53538 206 aaPredicted RBP3.75□□□□□ -1.81
SSO1YPL232W YMR130WQ04223 302 aa3.75□□□□□ -1.81
SSO1YPL232W TIM18Q08749 192 aa3.75□□□□□ -1.81
SSO1YPL232W MED4Q12343 284 aa3.75□□□□□ -1.81
SSO1YPL232W MIR1P23641 311 aaKnown RBP3.74□□□□□ -1.81
SSO1YPL232W OTU1P43558 301 aa3.74□□□□□ -1.81
SSO1YPL232W VHT1P53241 593 aa3.74□□□□□ -1.81
SSO1YPL232W VBA1Q04301 562 aa3.74□□□□□ -1.81
SSO1YPL232W FEX1Q08913 375 aa3.74□□□□□ -1.81
SSO1YPL232W FEX2Q08991 375 aa3.74□□□□□ -1.81
SSO1YPL232W CAP2P13517 287 aa3.73□□□□□ -1.81
SSO1YPL232W MSS1P32559 526 aaPredicted RBP3.73□□□□□ -1.81
SSO1YPL232W CDS1P38221 457 aa3.73□□□□□ -1.81
SSO1YPL232W RTT105P40063 208 aa3.73□□□□□ -1.81
SSO1YPL232W PDS1P40316 373 aaPredicted RBP3.73□□□□□ -1.81
SSO1YPL232W DFG10P40526 253 aa3.73□□□□□ -1.81
SSO1YPL232W YGR042WP53227 271 aa3.73□□□□□ -1.81
SSO1YPL232W MSO1P53604 210 aaKnown RBP3.73□□□□□ -1.81
SSO1YPL232W OCA2P53949 197 aa3.73□□□□□ -1.81
SSO1YPL232W SGF11Q03067 99 aa3.73□□□□□ -1.81
SSO1YPL232W VAM10Q08474 114 aa3.73□□□□□ -1.81
SSO1YPL232W ATG41Q12048 136 aa3.73□□□□□ -1.81
SSO1YPL232W MED11Q99278 115 aa3.73□□□□□ -1.81
SSO1YPL232W UBA3Q99344 299 aa3.73□□□□□ -1.81
SSO1YPL232W RPS18AP0CX55 146 aaKnown RBP3.72□□□□□ -1.81
SSO1YPL232W RPS18BP0CX56 146 aaPredicted RBP3.72□□□□□ -1.81
SSO1YPL232W CDC34P14682 295 aa3.72□□□□□ -1.81
SSO1YPL232W TRR1P29509 319 aaKnown RBP3.72□□□□□ -1.81
SSO1YPL232W SIP1P32578 815 aa3.72□□□□□ -1.81
SSO1YPL232W RRT1P38192 103 aa3.72□□□□□ -1.81
SSO1YPL232W VMA22P38784 181 aa3.72□□□□□ -1.81
SSO1YPL232W YJL027CP47063 138 aaPredicted RBP3.72□□□□□ -1.81
SSO1YPL232W YPR195CQ06594 109 aa3.72□□□□□ -1.81
SSO1YPL232W RBD2Q12270 262 aa3.72□□□□□ -1.81
SSO1YPL232W TAF3Q12297 353 aa3.72□□□□□ -1.81
SSO1YPL232W CUP2P15315 225 aa3.71□□□□□ -1.82
SSO1YPL232W SNU13P39990 126 aaKnown RBP3.71□□□□□ -1.82
SSO1YPL232W ARP3P47117 449 aaKnown RBP3.71□□□□□ -1.82
SSO1YPL232W MAK3Q03503 176 aa3.71□□□□□ -1.82
SSO1YPL232W MCM21Q06675 368 aa3.71□□□□□ -1.82
SSO1YPL232W MRPL35Q06678 367 aa3.71□□□□□ -1.82
SSO1YPL232W LDS2Q08218 356 aa3.71□□□□□ -1.82
SSO1YPL232W POP5P28005 173 aa3.7□□□□□ -1.82
SSO1YPL232W VMA8P32610 256 aaKnown RBP3.7□□□□□ -1.82
SSO1YPL232W FMT1P32785 401 aa3.7□□□□□ -1.82
SSO1YPL232W SNF11P38956 169 aa3.7□□□□□ -1.82
SSO1YPL232W YNL200CP40165 246 aaKnown RBP3.7□□□□□ -1.82
SSO1YPL232W SNX4P47057 423 aa3.7□□□□□ -1.82
SSO1YPL232W MEH1Q02205 184 aa3.7□□□□□ -1.82
SSO1YPL232W YML018CQ03730 393 aa3.7□□□□□ -1.82
SSO1YPL232W YMR244WQ04018 355 aa3.7□□□□□ -1.82
SSO1YPL232W RTT103Q05543 409 aa3.7□□□□□ -1.82
SSO1YPL232W IZH3Q07959 543 aa3.7□□□□□ -1.82
SSO1YPL232W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SSO1YPL232W ATG31Q12421 196 aa3.7□□□□□ -1.82
SSO1YPL232W YGL258W-AQ3E740 77 aa3.7□□□□□ -1.82
SSO1YPL232W YOR011W-AQ3E807 68 aa3.7□□□□□ -1.82
SSO1YPL232W AFR1P33304 620 aa3.69□□□□□ -1.82
SSO1YPL232W VMA10P48836 114 aaKnown RBP3.69□□□□□ -1.82
SSO1YPL232W MRPS8Q03799 155 aa3.69□□□□□ -1.82
SSO1YPL232W YBR255C-AQ3E776 120 aa3.69□□□□□ -1.82
SSO1YPL232W YCR001WP25347 104 aa3.68□□□□□ -1.82
SSO1YPL232W YBL071CP38185 102 aa3.68□□□□□ -1.82
SSO1YPL232W PCL6P40038 420 aa3.68□□□□□ -1.82
SSO1YPL232W GPI2P46961 280 aa3.68□□□□□ -1.82
SSO1YPL232W YAP1802P53309 568 aa3.68□□□□□ -1.82
SSO1YPL232W YIP3P53633 176 aa3.68□□□□□ -1.82
SSO1YPL232W RCF1Q03713 159 aa3.68□□□□□ -1.82
SSO1YPL232W KEI1Q06346 221 aa3.68□□□□□ -1.82
SSO1YPL232W GPN3Q06543 272 aa3.68□□□□□ -1.82
SSO1YPL232W LCL2Q08045 131 aa3.68□□□□□ -1.82
SSO1YPL232W PRM7Q12459 698 aa3.68□□□□□ -1.82
SSO1YPL232W YNL146C-AQ3E7Z1 64 aa3.68□□□□□ -1.82
SSO1YPL232W PET20Q99373 253 aa3.68□□□□□ -1.82
SSO1YPL232W MRPL27P36526 146 aaPredicted RBP3.67□□□□□ -1.82
SSO1YPL232W LSM12P38828 187 aaKnown RBP3.67□□□□□ -1.82
SSO1YPL232W MIG3P39943 394 aa3.67□□□□□ -1.82
SSO1YPL232W RTS2P40962 232 aa3.67□□□□□ -1.82
SSO1YPL232W MDJ2P42834 146 aa3.67□□□□□ -1.82
SSO1YPL232W EST3Q03096 181 aa3.67□□□□□ -1.82
SSO1YPL232W NRG1Q03125 231 aa3.67□□□□□ -1.82
SSO1YPL232W SYM1Q06563 197 aa3.67□□□□□ -1.82
SSO1YPL232W POS5Q06892 414 aa3.67□□□□□ -1.82
SSO1YPL232W YPL225WQ08971 146 aaKnown RBP3.67□□□□□ -1.82
SSO1YPL232W MET17P06106 444 aa3.66□□□□□ -1.82
SSO1YPL232W SEC66P33754 206 aa3.66□□□□□ -1.82
SSO1YPL232W CMC1P36064 111 aa3.66□□□□□ -1.82
SSO1YPL232W HTD2P38790 280 aaKnown RBP3.66□□□□□ -1.82
SSO1YPL232W GLE2P40066 365 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms