RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W OPY1P38271 328 aa2.03□□□□□ -2.08
SRL1YOR247W YHR022CP38763 256 aa2.03□□□□□ -2.08
SRL1YOR247W EFM5P53200 248 aaKnown RBP2.03□□□□□ -2.08
SRL1YOR247W SMD2Q06217 110 aaKnown RBP2.03□□□□□ -2.08
SRL1YOR247W YML100W-AQ8TGT0 57 aa2.03□□□□□ -2.08
SRL1YOR247W YIL177CP40434 1758 aa2.03□□□□□ -2.09
SRL1YOR247W YJL225CP40889 1758 aa2.03□□□□□ -2.09
SRL1YOR247W ARO7P32178 256 aa2.02□□□□□ -2.09
SRL1YOR247W YKL102CP34249 101 aa2.02□□□□□ -2.09
SRL1YOR247W PAN3P36102 679 aaPredicted RBP2.02□□□□□ -2.09
SRL1YOR247W TVP38P36164 337 aa2.02□□□□□ -2.09
SRL1YOR247W YBR209WP38311 105 aa2.02□□□□□ -2.09
SRL1YOR247W YER121WP40076 114 aa2.02□□□□□ -2.09
SRL1YOR247W GPI17Q04080 534 aa2.02□□□□□ -2.09
SRL1YOR247W YOL014WQ08110 124 aa2.02□□□□□ -2.09
SRL1YOR247W YOR342CQ12182 319 aa2.02□□□□□ -2.09
SRL1YOR247W AME1P38313 324 aa2.01□□□□□ -2.09
SRL1YOR247W NSG1P38837 291 aa2.01□□□□□ -2.09
SRL1YOR247W MTW1P39731 289 aa2.01□□□□□ -2.09
SRL1YOR247W VTC1P40046 129 aaRIP-Chip data2.01□□□□□ -2.09not detected
SRL1YOR247W BOL2P53082 120 aa2.01□□□□□ -2.09
SRL1YOR247W CYT2Q00873 224 aa2.01□□□□□ -2.09
SRL1YOR247W YMR295CQ03559 197 aa2.01□□□□□ -2.09
SRL1YOR247W YLR053CQ12026 108 aa2.01□□□□□ -2.09
SRL1YOR247W ATG40Q99325 256 aa2.01□□□□□ -2.09
SRL1YOR247W YAR023CD6VPM8 179 aa2□□□□□ -2.09
SRL1YOR247W FMP23P38231 175 aa2□□□□□ -2.09
SRL1YOR247W DSE2P38844 325 aa2□□□□□ -2.09
SRL1YOR247W FCY21P40039 528 aa2□□□□□ -2.09
SRL1YOR247W AGE2P40529 298 aa2□□□□□ -2.09
SRL1YOR247W DAN1P47178 298 aa2□□□□□ -2.09
SRL1YOR247W SAY1P53324 424 aa2□□□□□ -2.09
SRL1YOR247W YNR077CP53758 84 aa2□□□□□ -2.09
SRL1YOR247W VPS71Q03433 280 aa2□□□□□ -2.09
SRL1YOR247W MAK3Q03503 176 aa2□□□□□ -2.09
SRL1YOR247W YLR412C-AQ3E742 68 aa2□□□□□ -2.09
SRL1YOR247W BOL1Q3E793 110 aa2□□□□□ -2.09
SRL1YOR247W POR1P04840 283 aaKnown RBP1.99□□□□□ -2.09
SRL1YOR247W MDH2P22133 377 aa1.99□□□□□ -2.09
SRL1YOR247W TFC1P32367 649 aa1.99□□□□□ -2.09
SRL1YOR247W NRG2P38082 220 aa1.99□□□□□ -2.09
SRL1YOR247W RFC2P40348 353 aa1.99□□□□□ -2.09
SRL1YOR247W GPI14P47088 403 aaKnown RBP1.99□□□□□ -2.09
SRL1YOR247W TMA20P89886 181 aaPredicted RBP1.99□□□□□ -2.09
SRL1YOR247W YMR099CQ03161 297 aaKnown RBP1.99□□□□□ -2.09
SRL1YOR247W SHH3Q04487 196 aa1.99□□□□□ -2.09
SRL1YOR247W MET5P47169 1442 aa1.99□□□□□ -2.09
SRL1YOR247W RPS28BP0C0X0 67 aaKnown RBP1.98□□□□□ -2.09
SRL1YOR247W DDI2P0CH63 225 aa1.98□□□□□ -2.09
SRL1YOR247W DDI3P0CH64 225 aa1.98□□□□□ -2.09
SRL1YOR247W FZF1P32805 299 aa1.98□□□□□ -2.09
SRL1YOR247W TVP23P38962 199 aa1.98□□□□□ -2.09
SRL1YOR247W YJL027CP47063 138 aaPredicted RBP1.98□□□□□ -2.09
SRL1YOR247W MPA43P53583 542 aaPredicted RBP1.98□□□□□ -2.09
SRL1YOR247W BUD25P85052 153 aa1.98□□□□□ -2.09
SRL1YOR247W CUE4Q04201 117 aaPredicted RBP1.98□□□□□ -2.09
SRL1YOR247W RDI1Q12434 202 aa1.98□□□□□ -2.09
SRL1YOR247W RPS28AQ3E7X9 67 aaPredicted RBP1.98□□□□□ -2.09
SRL1YOR247W YLR236CA0A023PZG4 107 aa1.97□□□□□ -2.09
SRL1YOR247W RAS2P01120 322 aaKnown RBP1.97□□□□□ -2.09
SRL1YOR247W NSP1P14907 823 aaKnown RBP1.97□□□□□ -2.09
SRL1YOR247W PEP8P40335 379 aa1.97□□□□□ -2.09
SRL1YOR247W CUP9P41817 306 aa1.97□□□□□ -2.09
SRL1YOR247W YFL019CP43576 117 aa1.97□□□□□ -2.09
SRL1YOR247W YFH7P43591 353 aa1.97□□□□□ -2.09
SRL1YOR247W XPT1P47165 209 aa1.97□□□□□ -2.09
SRL1YOR247W YGL235WP53071 178 aa1.97□□□□□ -2.09
SRL1YOR247W TIM13P53299 105 aa1.97□□□□□ -2.09
SRL1YOR247W YDR476CQ03362 224 aa1.97□□□□□ -2.09
SRL1YOR247W DGK1Q12382 290 aa1.97□□□□□ -2.09
SRL1YOR247W PDR18P53756 1333 aa1.96□□□□□ -2.1
SRL1YOR247W SPO13P23624 291 aa1.96□□□□□ -2.1
SRL1YOR247W UBC6P33296 250 aaPredicted RBP1.96□□□□□ -2.1
SRL1YOR247W FIG1P38224 298 aa1.96□□□□□ -2.1
SRL1YOR247W GAA1P39012 614 aa1.96□□□□□ -2.1
SRL1YOR247W GRX5Q02784 150 aa1.96□□□□□ -2.1
SRL1YOR247W SML1Q04964 104 aa1.96□□□□□ -2.1
SRL1YOR247W NAT3Q06504 195 aa1.96□□□□□ -2.1
SRL1YOR247W EDC3P39998 551 aaKnown RBP1.95□□□□□ -2.1
SRL1YOR247W NSA2P40078 261 aaKnown RBP1.95□□□□□ -2.1
SRL1YOR247W AYR1P40471 297 aa1.95□□□□□ -2.1
SRL1YOR247W ERJ5P43613 295 aaPredicted RBP1.95□□□□□ -2.1
SRL1YOR247W MPC3P53311 146 aa1.95□□□□□ -2.1
SRL1YOR247W NSL1Q12143 216 aa1.95□□□□□ -2.1
SRL1YOR247W YDL180WQ12301 547 aa1.95□□□□□ -2.1
SRL1YOR247W YHR086W-AQ3E746 53 aa1.95□□□□□ -2.1
SRL1YOR247W TIR1P10863 254 aa1.94□□□□□ -2.1
SRL1YOR247W DER1P38307 211 aa1.94□□□□□ -2.1
SRL1YOR247W SPC25P40014 221 aa1.94□□□□□ -2.1
SRL1YOR247W TTI2P47168 421 aa1.94□□□□□ -2.1
SRL1YOR247W KNH1P50112 268 aa1.94□□□□□ -2.1
SRL1YOR247W POP3P53833 195 aaPredicted RBP1.94□□□□□ -2.1
SRL1YOR247W HSK3P69852 69 aa1.94□□□□□ -2.1
SRL1YOR247W YMR253CQ04835 414 aa1.94□□□□□ -2.1
SRL1YOR247W ANT1Q06497 328 aa1.94□□□□□ -2.1
SRL1YOR247W RAD28Q12021 506 aa1.94□□□□□ -2.1
SRL1YOR247W IDP1P21954 428 aaKnown RBP1.93□□□□□ -2.1
SRL1YOR247W NUF2P33895 451 aa1.93□□□□□ -2.1
SRL1YOR247W TMA19P35691 167 aaKnown RBP1.93□□□□□ -2.1
SRL1YOR247W SBH1P52870 82 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms