RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	ATG39	Q06159	398 aa		2.77	□□□□□ -1.97
PMS1	YNL082W	YPR170W-B	P0C5R9	85 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	SCO1	P23833	295 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	CNB1	P25296	175 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	TRM5	P38793	499 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	SPO73	P40031	143 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	YER188W	P40103	239 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	YKE4	P40544	346 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	YJL016W	P47072	561 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	YPR195C	Q06594	109 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	SNF6	P18888	332 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	YGP1	P38616	354 aa	Known RBP	2.76	□□□□□ -1.97
PMS1	YNL082W	YOR020W-A	Q3E824	90 aa		2.76	□□□□□ -1.97
PMS1	YNL082W	YLR156W	P0CE96	114 aa		2.75	□□□□□ -1.97
PMS1	YNL082W	YLR159W	P0CE97	114 aa		2.75	□□□□□ -1.97
PMS1	YNL082W	YLR161W	P0CE98	114 aa		2.75	□□□□□ -1.97
PMS1	YNL082W	ILM1	P47155	203 aa		2.75	□□□□□ -1.97
PMS1	YNL082W	YLR460C	P54007	376 aa		2.75	□□□□□ -1.97
PMS1	YNL082W	YMR315W	Q04869	349 aa	Known RBP	2.75	□□□□□ -1.97
PMS1	YNL082W	TIF34	P40217	347 aa	Known RBP	2.75	□□□□□ -1.97
PMS1	YNL082W	ARR2	Q06597	130 aa		2.75	□□□□□ -1.97
PMS1	YNL082W	ARO7	P32178	256 aa		2.74	□□□□□ -1.97
PMS1	YNL082W	ARC15	P40518	154 aa	RIP-Chip data	2.74	□□□□□ -1.97	not detected
PMS1	YNL082W	TAO3	P40468	2376 aa		2.74	□□□□□ -1.97
PMS1	YNL082W	MAK5	P38112	773 aa	Predicted RBP	2.74	□□□□□ -1.97
PMS1	YNL082W	ARP3	P47117	449 aa	Known RBP	2.74	□□□□□ -1.97
PMS1	YNL082W	YPL162C	Q12042	273 aa		2.74	□□□□□ -1.97
PMS1	YNL082W	LSO2	Q3E772	92 aa	Known RBP	2.74	□□□□□ -1.97
PMS1	YNL082W	CMC2	Q3E7A4	109 aa		2.74	□□□□□ -1.97
PMS1	YNL082W	FIS1	P40515	155 aa		2.73	□□□□□ -1.97
PMS1	YNL082W	PDR18	P53756	1333 aa		2.73	□□□□□ -1.97
PMS1	YNL082W	PUT1	P09368	476 aa		2.73	□□□□□ -1.97
PMS1	YNL082W	FBA1	P14540	359 aa	Known RBP	2.73	□□□□□ -1.97
PMS1	YNL082W	PHO88	P38264	188 aa	Predicted RBP	2.73	□□□□□ -1.97
PMS1	YNL082W	HMF1	P40037	129 aa	Known RBP	2.73	□□□□□ -1.97
PMS1	YNL082W	YNL247W	P53852	767 aa	Known RBP	2.73	□□□□□ -1.97
PMS1	YNL082W	YOL024W	Q08172	172 aa		2.73	□□□□□ -1.97
PMS1	YNL082W	BRX1	Q08235	291 aa	Known RBP	2.73	□□□□□ -1.97
PMS1	YNL082W	SAS5	Q99314	248 aa		2.73	□□□□□ -1.97
PMS1	YNL082W	IGO2	Q9P305	131 aa		2.73	□□□□□ -1.97
PMS1	YNL082W	ATP15	P21306	62 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	FMT1	P32785	401 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	VPS68	Q12016	184 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	YER076C	P40049	302 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	YIR035C	P40579	254 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	YMR321C	Q04898	105 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	AKR2	Q12013	749 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	CCA1	P21269	546 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	TAH1	P25638	111 aa	Predicted RBP	2.72	□□□□□ -1.97
PMS1	YNL082W	MIG1	P27705	504 aa		2.72	□□□□□ -1.97
PMS1	YNL082W	PET9	P18239	318 aa	Known RBP	2.71	□□□□□ -1.98
PMS1	YNL082W	POP4	P38336	279 aa		2.71	□□□□□ -1.98
PMS1	YNL082W	YGL088W	P53151	121 aa		2.71	□□□□□ -1.98
PMS1	YNL082W	SWP1	Q02795	286 aa		2.71	□□□□□ -1.98
PMS1	YNL082W	YOR283W	Q12040	230 aa	Known RBP	2.71	□□□□□ -1.98
PMS1	YNL082W	RPL26A	P05743	127 aa	Known RBP	2.71	□□□□□ -1.98
PMS1	YNL082W	SHG1	P38337	142 aa		2.71	□□□□□ -1.98
PMS1	YNL082W	RPL26B	P53221	127 aa	Known RBP	2.71	□□□□□ -1.98
PMS1	YNL082W	RPB3	P16370	318 aa	Known RBP	2.7	□□□□□ -1.98
PMS1	YNL082W	YHR180W	P38868	163 aa		2.7	□□□□□ -1.98
PMS1	YNL082W	YAR068W	P39564	161 aa		2.7	□□□□□ -1.98
PMS1	YNL082W	SIR2	P06700	562 aa		2.7	□□□□□ -1.98
PMS1	YNL082W	RSA4	P25382	515 aa	Known RBP	2.7	□□□□□ -1.98
PMS1	YNL082W	UBC6	P33296	250 aa	Predicted RBP	2.7	□□□□□ -1.98
PMS1	YNL082W	MED6	P38782	295 aa		2.7	□□□□□ -1.98
PMS1	YNL082W	TVP23	P38962	199 aa		2.7	□□□□□ -1.98
PMS1	YNL082W	YJR111C	P47148	283 aa	Known RBP	2.7	□□□□□ -1.98
PMS1	YNL082W	SOL1	P50278	321 aa		2.7	□□□□□ -1.98
PMS1	YNL082W	RPL25	P04456	142 aa	Known RBP	2.69	□□□□□ -1.98
PMS1	YNL082W	MAG1	P22134	296 aa	Known RBP	2.69	□□□□□ -1.98
PMS1	YNL082W	TRR1	P29509	319 aa	Known RBP	2.69	□□□□□ -1.98
PMS1	YNL082W	HRT1	Q08273	121 aa		2.69	□□□□□ -1.98
PMS1	YNL082W	MBF1	O14467	151 aa	Known RBP	2.68	□□□□□ -1.98
PMS1	YNL082W	CDC8	P00572	216 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	SCM4	P32564	187 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	YKR032W	P36127	104 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	PDS1	P40316	373 aa	Predicted RBP	2.68	□□□□□ -1.98
PMS1	YNL082W	MOB1	P40484	314 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	RDS3	Q06835	107 aa	Predicted RBP	2.68	□□□□□ -1.98
PMS1	YNL082W	ATG22	P25568	528 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	CAF4	P36130	643 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	TVP38	P36164	337 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	MRPL17	P36528	281 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	SRP14	P38985	146 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	RSM25	P40496	264 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	YJL144W	P47009	104 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	ARO8	P53090	500 aa	Known RBP	2.68	□□□□□ -1.98
PMS1	YNL082W	YMD8	Q03697	442 aa		2.68	□□□□□ -1.98
PMS1	YNL082W	RMD6	P39975	231 aa		2.67	□□□□□ -1.98
PMS1	YNL082W	YJL027C	P47063	138 aa	Predicted RBP	2.67	□□□□□ -1.98
PMS1	YNL082W	FES1	P38260	290 aa		2.67	□□□□□ -1.98
PMS1	YNL082W	NVJ1	P38881	321 aa		2.67	□□□□□ -1.98
PMS1	YNL082W	SKI6	P46948	246 aa	Predicted RBP	2.67	□□□□□ -1.98
PMS1	YNL082W	HSK3	P69852	69 aa		2.67	□□□□□ -1.98
PMS1	YNL082W	PRM7	Q12459	698 aa		2.67	□□□□□ -1.98
PMS1	YNL082W	TEL1	P38110	2787 aa		2.66	□□□□□ -1.98
PMS1	YNL082W	RAD50	P12753	1312 aa		2.66	□□□□□ -1.98
PMS1	YNL082W	OCH1	P31755	480 aa		2.66	□□□□□ -1.98
PMS1	YNL082W	AME1	P38313	324 aa		2.66	□□□□□ -1.98
PMS1	YNL082W	SNX4	P47057	423 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 159.1 ms