RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W SPG4Q04438 115 aa1.43□□□□□ -2.18
CSI1YMR025W ATG38Q05789 226 aaKnown RBP1.43□□□□□ -2.18
CSI1YMR025W RAF1Q06891 181 aa1.43□□□□□ -2.18
CSI1YMR025W YOL131WQ08270 108 aa1.43□□□□□ -2.18
CSI1YMR025W RRS1Q08746 203 aaKnown RBP1.43□□□□□ -2.18
CSI1YMR025W GRE1Q08969 168 aa1.43□□□□□ -2.18
CSI1YMR025W YCT1Q12235 531 aa1.43□□□□□ -2.18
CSI1YMR025W MED4Q12343 284 aa1.43□□□□□ -2.18
CSI1YMR025W BBP1Q12365 385 aa1.43□□□□□ -2.18
CSI1YMR025W CYR1P08678 2026 aaKnown RBP1.43□□□□□ -2.18
CSI1YMR025W FLO9P39712 1322 aa1.42□□□□□ -2.18
CSI1YMR025W RAS2P01120 322 aaKnown RBP1.42□□□□□ -2.18
CSI1YMR025W SGA1P08019 549 aa1.42□□□□□ -2.18
CSI1YMR025W RAD51P25454 400 aa1.42□□□□□ -2.18
CSI1YMR025W MRPL39P36533 70 aa1.42□□□□□ -2.18
CSI1YMR025W SSH1P38353 490 aaKnown RBP1.42□□□□□ -2.18
CSI1YMR025W AST2P39945 430 aaKnown RBP1.42□□□□□ -2.18
CSI1YMR025W COG3P40094 801 aa1.42□□□□□ -2.18
CSI1YMR025W PRE6P40303 254 aaKnown RBP1.42□□□□□ -2.18
CSI1YMR025W YJL027CP47063 138 aaPredicted RBP1.42□□□□□ -2.18
CSI1YMR025W MRH4P53166 561 aa1.42□□□□□ -2.18
CSI1YMR025W CUS2P53830 285 aaPredicted RBP1.42□□□□□ -2.18
CSI1YMR025W SRL4Q03085 281 aa1.42□□□□□ -2.18
CSI1YMR025W RNH1Q04740 348 aa1.42□□□□□ -2.18
CSI1YMR025W SEI1Q06058 285 aa1.42□□□□□ -2.18
CSI1YMR025W CSM4Q08955 156 aa1.42□□□□□ -2.18
CSI1YMR025W MCP1Q12106 302 aa1.42□□□□□ -2.18
CSI1YMR025W YOR214CQ12282 236 aa1.42□□□□□ -2.18
CSI1YMR025W STT4P37297 1900 aa1.42□□□□□ -2.18
CSI1YMR025W RHO1P06780 209 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W RPL35AP0CX84 120 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W RPL35BP0CX85 120 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W MATALPHA1P0CY06 175 aa1.41□□□□□ -2.18
CSI1YMR025W HMLALPHA1P0CY07 175 aa1.41□□□□□ -2.18
CSI1YMR025W RPS1BP23248 255 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W YCR016WP25617 290 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W RPC19P28000 142 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W MSN4P33749 630 aa1.41□□□□□ -2.18
CSI1YMR025W RCN1P36054 211 aa1.41□□□□□ -2.18
CSI1YMR025W MSA2P36157 363 aa1.41□□□□□ -2.18
CSI1YMR025W YBR032WP38223 100 aa1.41□□□□□ -2.18
CSI1YMR025W FZO1P38297 855 aa1.41□□□□□ -2.18
CSI1YMR025W FMC1P40491 155 aa1.41□□□□□ -2.18
CSI1YMR025W YJL016WP47072 561 aa1.41□□□□□ -2.18
CSI1YMR025W SBH2P52871 88 aa1.41□□□□□ -2.18
CSI1YMR025W COS6P53344 381 aa1.41□□□□□ -2.18
CSI1YMR025W MRPL50P53724 139 aa1.41□□□□□ -2.18
CSI1YMR025W FAR8Q05040 523 aa1.41□□□□□ -2.18
CSI1YMR025W YLR036CQ07986 203 aa1.41□□□□□ -2.18
CSI1YMR025W BRX1Q08235 291 aaKnown RBP1.41□□□□□ -2.18
CSI1YMR025W SYC1Q08553 188 aaPredicted RBP1.41□□□□□ -2.18
CSI1YMR025W YOR186WQ08560 144 aa1.41□□□□□ -2.18
CSI1YMR025W JLP1Q12358 412 aa1.41□□□□□ -2.18
CSI1YMR025W SNU23Q12368 194 aaPredicted RBP1.41□□□□□ -2.18
CSI1YMR025W EMC6Q12431 108 aa1.41□□□□□ -2.18
CSI1YMR025W MHF1Q3E835 90 aa1.41□□□□□ -2.18
CSI1YMR025W SAS5Q99314 248 aa1.41□□□□□ -2.18
CSI1YMR025W URA2P07259 2214 aaKnown RBP1.4□□□□□ -2.18
CSI1YMR025W MER1P16523 270 aa1.4□□□□□ -2.19
CSI1YMR025W MDH2P22133 377 aa1.4□□□□□ -2.19
CSI1YMR025W SEC17P32602 292 aa1.4□□□□□ -2.19
CSI1YMR025W PTC1P35182 281 aa1.4□□□□□ -2.19
CSI1YMR025W MRPL17P36528 281 aa1.4□□□□□ -2.19
CSI1YMR025W YBR220CP38318 560 aa1.4□□□□□ -2.19
CSI1YMR025W THO1P40040 218 aaKnown RBP1.4□□□□□ -2.19
CSI1YMR025W RGI1P40043 161 aaPredicted RBP1.4□□□□□ -2.19
CSI1YMR025W RFC4P40339 323 aaKnown RBP1.4□□□□□ -2.19
CSI1YMR025W YIR020CP40575 100 aa1.4□□□□□ -2.19
CSI1YMR025W MRPL49P40858 161 aaPredicted RBP1.4□□□□□ -2.19
CSI1YMR025W YGR201CP42936 225 aa1.4□□□□□ -2.19
CSI1YMR025W MPC1P53157 130 aaKnown RBP1.4□□□□□ -2.19
CSI1YMR025W YNL046WP53956 172 aa1.4□□□□□ -2.19
CSI1YMR025W PEX12Q04370 399 aa1.4□□□□□ -2.19
CSI1YMR025W KRE28Q04431 385 aa1.4□□□□□ -2.19
CSI1YMR025W MSA1Q08471 629 aa1.4□□□□□ -2.19
CSI1YMR025W NIP7Q08962 181 aaKnown RBP1.4□□□□□ -2.19
CSI1YMR025W YLR126CQ12288 251 aa1.4□□□□□ -2.19
CSI1YMR025W YDL180WQ12301 547 aa1.4□□□□□ -2.19
CSI1YMR025W YPL229WQ99395 206 aa1.4□□□□□ -2.19
CSI1YMR025W Q0297Q9ZZV8 51 aa1.4□□□□□ -2.19
CSI1YMR025W CCW14O13547 238 aa1.39□□□□□ -2.19
CSI1YMR025W YHR032W-AP0C5N6 59 aa1.39□□□□□ -2.19
CSI1YMR025W MDH3P32419 343 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
CSI1YMR025W YKL075CP36083 450 aa1.39□□□□□ -2.19
CSI1YMR025W YHR180WP38868 163 aa1.39□□□□□ -2.19
CSI1YMR025W FCY21P40039 528 aa1.39□□□□□ -2.19
CSI1YMR025W OST2P46964 130 aa1.39□□□□□ -2.19
CSI1YMR025W ADO1P47143 340 aaKnown RBP1.39□□□□□ -2.19
CSI1YMR025W YGL159WP53110 370 aa1.39□□□□□ -2.19
CSI1YMR025W PET191Q02772 108 aa1.39□□□□□ -2.19
CSI1YMR025W RCE1Q03530 315 aa1.39□□□□□ -2.19
CSI1YMR025W IRC19Q07843 230 aa1.39□□□□□ -2.19
CSI1YMR025W NSL1Q12143 216 aa1.39□□□□□ -2.19
CSI1YMR025W YKL018C-AQ3E7A7 99 aa1.39□□□□□ -2.19
CSI1YMR025W CDC39P25655 2108 aaKnown RBP1.39□□□□□ -2.19
CSI1YMR025W BLM10P43583 2143 aa1.39□□□□□ -2.19
CSI1YMR025W SLH1P53327 1967 aaKnown RBP1.38□□□□□ -2.19
CSI1YMR025W ERD2P18414 219 aa1.38□□□□□ -2.19
CSI1YMR025W CCA1P21269 546 aa1.38□□□□□ -2.19
CSI1YMR025W APA2P22108 325 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 125.8 ms