RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C YSP2Q06681 1438 aa1.21□□□□□ -2.22
SMD3YLR147C NUP170P38181 1502 aa1.2□□□□□ -2.22
SMD3YLR147C VPS13Q07878 3144 aa1.2□□□□□ -2.22
SMD3YLR147C YOR1P53049 1477 aa1.2□□□□□ -2.22
SMD3YLR147C MDM35O60200 86 aa1.2□□□□□ -2.22
SMD3YLR147C RPL25P04456 142 aaKnown RBP1.2□□□□□ -2.22
SMD3YLR147C YER188C-AP0C0V2 99 aa1.2□□□□□ -2.22
SMD3YLR147C MER1P16523 270 aa1.2□□□□□ -2.22
SMD3YLR147C STE18P18852 110 aa1.2□□□□□ -2.22
SMD3YLR147C PRP18P33411 251 aaPredicted RBP1.2□□□□□ -2.22
SMD3YLR147C ERG10P41338 398 aaKnown RBP1.2□□□□□ -2.22
SMD3YLR147C YMR007WQ03675 126 aa1.2□□□□□ -2.22
SMD3YLR147C YHR212W-AP0CX91 67 aa1.19□□□□□ -2.22
SMD3YLR147C COQ1P18900 473 aa1.19□□□□□ -2.22
SMD3YLR147C CKS1P20486 150 aaKnown RBP1.19□□□□□ -2.22
SMD3YLR147C SPS18P32572 300 aa1.19□□□□□ -2.22
SMD3YLR147C YPL073CP40323 161 aa1.19□□□□□ -2.22
SMD3YLR147C HYR1P40581 163 aaKnown RBP1.19□□□□□ -2.22
SMD3YLR147C MSS2P40990 351 aa1.19□□□□□ -2.22
SMD3YLR147C ODC2Q99297 307 aa1.19□□□□□ -2.22
SMD3YLR147C TOP2P06786 1428 aaKnown RBP1.18□□□□□ -2.22
SMD3YLR147C POR1P04840 283 aaKnown RBP1.18□□□□□ -2.22
SMD3YLR147C HUA1P40325 198 aa1.18□□□□□ -2.22
SMD3YLR147C HNT1Q04344 158 aaKnown RBP1.18□□□□□ -2.22
SMD3YLR147C GGA1Q06336 557 aa1.18□□□□□ -2.22
SMD3YLR147C DGA1Q08650 418 aa1.18□□□□□ -2.22
SMD3YLR147C YRA1Q12159 226 aaKnown RBP1.18□□□□□ -2.22
SMD3YLR147C PDR11P40550 1411 aa1.17□□□□□ -2.22
SMD3YLR147C OCH1P31755 480 aa1.17□□□□□ -2.22
SMD3YLR147C TAF14P35189 244 aa1.17□□□□□ -2.22
SMD3YLR147C TRM5P38793 499 aa1.17□□□□□ -2.22
SMD3YLR147C YMR252CQ04814 134 aa1.17□□□□□ -2.22
SMD3YLR147C YPR174CQ06616 221 aaPredicted RBP1.17□□□□□ -2.22
SMD3YLR147C ARO1P08566 1588 aaKnown RBP1.17□□□□□ -2.22
SMD3YLR147C IKI3Q06706 1349 aaKnown RBP1.16□□□□□ -2.22
SMD3YLR147C ARG80P07249 177 aa1.16□□□□□ -2.22
SMD3YLR147C YCR087C-AP37263 153 aa1.16□□□□□ -2.22
SMD3YLR147C TVP23P38962 199 aa1.16□□□□□ -2.22
SMD3YLR147C HMF1P40037 129 aaKnown RBP1.16□□□□□ -2.22
SMD3YLR147C YFH7P43591 353 aa1.16□□□□□ -2.22
SMD3YLR147C RPL37BP51402 88 aaKnown RBP1.16□□□□□ -2.22
SMD3YLR147C MDM32Q12171 622 aa1.16□□□□□ -2.22
SMD3YLR147C GCN1P33892 2672 aaKnown RBP1.16□□□□□ -2.22
SMD3YLR147C TEL1P38110 2787 aa1.16□□□□□ -2.22
SMD3YLR147C SSN2P38931 1420 aa1.15□□□□□ -2.22
SMD3YLR147C TRM3Q07527 1436 aa1.15□□□□□ -2.22
SMD3YLR147C GDB1Q06625 1536 aa1.15□□□□□ -2.22
SMD3YLR147C TY3B-GQ99315 1547 aa1.15□□□□□ -2.22
SMD3YLR147C MMS22Q06164 1454 aa1.15□□□□□ -2.23
SMD3YLR147C DNF3Q12674 1656 aa1.15□□□□□ -2.23
SMD3YLR147C SNT2P53127 1403 aa1.15□□□□□ -2.23
SMD3YLR147C SMC4Q12267 1418 aa1.15□□□□□ -2.23
SMD3YLR147C DOP1Q03921 1698 aa1.14□□□□□ -2.23
SMD3YLR147C MYO4P32492 1471 aa1.14□□□□□ -2.23
SMD3YLR147C IKI1P38874 309 aa1.14□□□□□ -2.23
SMD3YLR147C GCN20P43535 752 aaKnown RBP1.14□□□□□ -2.23
SMD3YLR147C AIM25P47140 327 aa1.14□□□□□ -2.23
SMD3YLR147C BCK1Q01389 1478 aa1.13□□□□□ -2.23
SMD3YLR147C CNB1P25296 175 aa1.13□□□□□ -2.23
SMD3YLR147C PAN3P36102 679 aaPredicted RBP1.13□□□□□ -2.23
SMD3YLR147C YHL018WP38744 120 aaPredicted RBP1.13□□□□□ -2.23
SMD3YLR147C YEL008WP40001 126 aa1.13□□□□□ -2.23
SMD3YLR147C YEA4P40004 342 aa1.13□□□□□ -2.23
SMD3YLR147C GET1P53192 235 aa1.13□□□□□ -2.23
SMD3YLR147C DAD4P69851 72 aa1.13□□□□□ -2.23
SMD3YLR147C BUD3P25558 1636 aa1.13□□□□□ -2.23
SMD3YLR147C HAP1P0CE41 1502 aa1.13□□□□□ -2.23
SMD3YLR147C PDR5P33302 1511 aaKnown RBP1.13□□□□□ -2.23
SMD3YLR147C TOR2P32600 2474 aaKnown RBP1.13□□□□□ -2.23
SMD3YLR147C YRF1-1P0CX20 1796 aa1.13□□□□□ -2.23
SMD3YLR147C YRF1-5P0CX21 1796 aa1.13□□□□□ -2.23
SMD3YLR147C YRF1-8P0CX22 1796 aa1.13□□□□□ -2.23
SMD3YLR147C TSC11P40061 1430 aa1.13□□□□□ -2.23
SMD3YLR147C IQG1Q12280 1495 aa1.12□□□□□ -2.23
SMD3YLR147C ULS1Q08562 1619 aa1.12□□□□□ -2.23
SMD3YLR147C YCR090CP25654 182 aaKnown RBP1.12□□□□□ -2.23
SMD3YLR147C RFA3P26755 122 aaKnown RBP1.12□□□□□ -2.23
SMD3YLR147C HPA3P39979 161 aa1.12□□□□□ -2.23
SMD3YLR147C RNH202Q05635 350 aa1.12□□□□□ -2.23
SMD3YLR147C SRB8P25648 1427 aa1.12□□□□□ -2.23
SMD3YLR147C POL1P13382 1468 aa1.12□□□□□ -2.23
SMD3YLR147C STU1P38198 1513 aa1.11□□□□□ -2.23
SMD3YLR147C IRC23Q08416 157 aa1.11□□□□□ -2.23
SMD3YLR147C PHO85P17157 305 aa1.1□□□□□ -2.23
SMD3YLR147C YCL042WP25572 119 aa1.1□□□□□ -2.23
SMD3YLR147C FIT2Q08906 153 aa1.1□□□□□ -2.23
SMD3YLR147C YDR034W-BQ6Q5X2 51 aa1.1□□□□□ -2.23
SMD3YLR147C ESP1Q03018 1630 aa1.1□□□□□ -2.23
SMD3YLR147C RSF2P46974 1380 aa1.09□□□□□ -2.23
SMD3YLR147C ECM4P36156 370 aa1.09□□□□□ -2.23
SMD3YLR147C SER2P42941 309 aa1.09□□□□□ -2.23
SMD3YLR147C SKI6P46948 246 aaPredicted RBP1.09□□□□□ -2.23
SMD3YLR147C YMR099CQ03161 297 aaKnown RBP1.09□□□□□ -2.23
SMD3YLR147C PRP11Q07350 266 aaPredicted RBP1.09□□□□□ -2.23
SMD3YLR147C RUD3Q12234 484 aaKnown RBP1.09□□□□□ -2.23
SMD3YLR147C GIS3Q12418 502 aa1.09□□□□□ -2.23
SMD3YLR147C IML1P47170 1584 aa1.08□□□□□ -2.24
SMD3YLR147C YAR023CD6VPM8 179 aa1.08□□□□□ -2.24
SMD3YLR147C COX8P04039 78 aa1.08□□□□□ -2.24
SMD3YLR147C RPL40AP0CH08 128 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms