RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C AIM25P47140 327 aa2.84□□□□□ -1.95
VPS53YJL029C ARO8P53090 500 aaKnown RBP2.84□□□□□ -1.95
VPS53YJL029C SSU72P53538 206 aaPredicted RBP2.84□□□□□ -1.95
VPS53YJL029C YLR031WQ07978 186 aa2.84□□□□□ -1.95
VPS53YJL029C PEX27Q08580 376 aa2.84□□□□□ -1.95
VPS53YJL029C RPL13AQ12690 199 aaPredicted RBP2.84□□□□□ -1.95
VPS53YJL029C MRPL3P36516 390 aa2.84□□□□□ -1.96
VPS53YJL029C RPA43P46669 326 aa2.84□□□□□ -1.96
VPS53YJL029C CAB4P53332 305 aa2.84□□□□□ -1.96
VPS53YJL029C LSM7P53905 115 aaKnown RBP2.84□□□□□ -1.96
VPS53YJL029C THI74Q04083 370 aa2.84□□□□□ -1.96
VPS53YJL029C TSA2Q04120 196 aa2.84□□□□□ -1.96
VPS53YJL029C ARR3Q06598 404 aa2.84□□□□□ -1.96
VPS53YJL029C SWT1Q12104 458 aa2.84□□□□□ -1.96
VPS53YJL029C ATO3Q12359 275 aa2.84□□□□□ -1.96
VPS53YJL029C ARG80P07249 177 aa2.83□□□□□ -1.96
VPS53YJL029C NHP6BP11633 99 aaKnown RBP2.83□□□□□ -1.96
VPS53YJL029C CAP2P13517 287 aa2.83□□□□□ -1.96
VPS53YJL029C OLE1P21147 510 aaKnown RBP2.83□□□□□ -1.96
VPS53YJL029C YBR144CP34215 104 aa2.83□□□□□ -1.96
VPS53YJL029C IPI1P38803 334 aaPredicted RBP2.83□□□□□ -1.96
VPS53YJL029C HPA3P39979 161 aa2.83□□□□□ -1.96
VPS53YJL029C PCL7P40186 285 aa2.83□□□□□ -1.96
VPS53YJL029C YJR012CP47087 207 aa2.83□□□□□ -1.96
VPS53YJL029C IMD3P50095 523 aaKnown RBP2.83□□□□□ -1.96
VPS53YJL029C YNL234WP53857 426 aa2.83□□□□□ -1.96
VPS53YJL029C CAB5Q03941 241 aa2.83□□□□□ -1.96
VPS53YJL029C PHO92Q06390 306 aa2.83□□□□□ -1.96
VPS53YJL029C YOL118CQ08259 102 aa2.83□□□□□ -1.96
VPS53YJL029C TRM13Q12383 476 aa2.83□□□□□ -1.96
VPS53YJL029C YOS1Q3E834 85 aa2.83□□□□□ -1.96
VPS53YJL029C QCR2P07257 368 aa2.83□□□□□ -1.96
VPS53YJL029C GEP4P38812 185 aa2.83□□□□□ -1.96
VPS53YJL029C CWC23P52868 283 aaPredicted RBP2.83□□□□□ -1.96
VPS53YJL029C NIF3P53081 288 aa2.83□□□□□ -1.96
VPS53YJL029C YGR151CP53287 111 aa2.83□□□□□ -1.96
VPS53YJL029C YGR219WP53307 113 aa2.83□□□□□ -1.96
VPS53YJL029C PAM18Q07914 168 aa2.83□□□□□ -1.96
VPS53YJL029C YGL258W-AQ3E740 77 aa2.83□□□□□ -1.96
VPS53YJL029C HUG1Q6Q5K6 68 aa2.83□□□□□ -1.96
VPS53YJL029C GRX2P17695 143 aaKnown RBP2.82□□□□□ -1.96
VPS53YJL029C NPL6P32832 435 aa2.82□□□□□ -1.96
VPS53YJL029C SDH4P37298 181 aa2.82□□□□□ -1.96
VPS53YJL029C MIC12P38341 106 aa2.82□□□□□ -1.96
VPS53YJL029C BFR1P38934 470 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
VPS53YJL029C SSO2P39926 295 aa2.82□□□□□ -1.96
VPS53YJL029C MRPS16Q02608 121 aa2.82□□□□□ -1.96
VPS53YJL029C RTT103Q05543 409 aa2.82□□□□□ -1.96
VPS53YJL029C SCM3Q12334 223 aa2.82□□□□□ -1.96
VPS53YJL029C JID1Q12350 301 aa2.82□□□□□ -1.96
VPS53YJL029C HTZ1Q12692 134 aaKnown RBP2.82□□□□□ -1.96
VPS53YJL029C TDH1P00360 332 aaKnown RBP2.82□□□□□ -1.96
VPS53YJL029C YCR016WP25617 290 aaKnown RBP2.82□□□□□ -1.96
VPS53YJL029C MIG1P27705 504 aa2.82□□□□□ -1.96
VPS53YJL029C FPR2P32472 135 aa2.82□□□□□ -1.96
VPS53YJL029C YHR122WP38829 231 aa2.82□□□□□ -1.96
VPS53YJL029C COX15P40086 486 aa2.82□□□□□ -1.96
VPS53YJL029C AGE2P40529 298 aa2.82□□□□□ -1.96
VPS53YJL029C FIP1P45976 327 aa2.82□□□□□ -1.96
VPS53YJL029C YHP1Q04116 353 aa2.82□□□□□ -1.96
VPS53YJL029C YPS3Q12303 508 aa2.82□□□□□ -1.96
VPS53YJL029C POM34Q12445 299 aa2.82□□□□□ -1.96
VPS53YJL029C ISN1Q99312 450 aa2.82□□□□□ -1.96
VPS53YJL029C HTB1P02293 131 aaKnown RBP2.81□□□□□ -1.96
VPS53YJL029C SPS2P08459 502 aa2.81□□□□□ -1.96
VPS53YJL029C PUT1P09368 476 aa2.81□□□□□ -1.96
VPS53YJL029C MRP17P28778 131 aa2.81□□□□□ -1.96
VPS53YJL029C ERV15P38312 142 aa2.81□□□□□ -1.96
VPS53YJL029C HOF1Q05080 669 aa2.81□□□□□ -1.96
VPS53YJL029C YFH1Q07540 174 aa2.81□□□□□ -1.96
VPS53YJL029C FCY1Q12178 158 aa2.81□□□□□ -1.96
VPS53YJL029C YCT1Q12235 531 aa2.81□□□□□ -1.96
VPS53YJL029C PRM4Q12498 284 aa2.81□□□□□ -1.96
VPS53YJL029C PAN3P36102 679 aaPredicted RBP2.81□□□□□ -1.96
VPS53YJL029C POP8P38208 133 aa2.81□□□□□ -1.96
VPS53YJL029C LSM12P38828 187 aaKnown RBP2.81□□□□□ -1.96
VPS53YJL029C ECM27P47144 725 aa2.81□□□□□ -1.96
VPS53YJL029C BUL1P48524 976 aa2.81□□□□□ -1.96
VPS53YJL029C ORM1P53224 222 aa2.81□□□□□ -1.96
VPS53YJL029C CRH1P53301 507 aa2.81□□□□□ -1.96
VPS53YJL029C VPS71Q03433 280 aa2.81□□□□□ -1.96
VPS53YJL029C MCH1Q07376 486 aa2.81□□□□□ -1.96
VPS53YJL029C MSE1P48525 536 aa2.8□□□□□ -1.96
VPS53YJL029C UBP8P50102 471 aa2.8□□□□□ -1.96
VPS53YJL029C RPN13O13563 156 aa2.8□□□□□ -1.96
VPS53YJL029C STF2P16965 84 aa2.8□□□□□ -1.96
VPS53YJL029C RNP1P32385 249 aa2.8□□□□□ -1.96
VPS53YJL029C SUA5P32579 426 aa2.8□□□□□ -1.96
VPS53YJL029C PDC2P32896 925 aa2.8□□□□□ -1.96
VPS53YJL029C YKR045CP36138 183 aa2.8□□□□□ -1.96
VPS53YJL029C ATP3P38077 311 aaKnown RBP2.8□□□□□ -1.96
VPS53YJL029C YBR242WP38331 238 aa2.8□□□□□ -1.96
VPS53YJL029C MPC2P38857 129 aa2.8□□□□□ -1.96
VPS53YJL029C LST8P41318 303 aa2.8□□□□□ -1.96
VPS53YJL029C ARP3P47117 449 aaKnown RBP2.8□□□□□ -1.96
VPS53YJL029C YML122CQ03207 126 aa2.8□□□□□ -1.96
VPS53YJL029C YDR415CQ04033 374 aaPredicted RBP2.8□□□□□ -1.96
VPS53YJL029C FSH2Q05015 223 aa2.8□□□□□ -1.96
VPS53YJL029C NDE2Q07500 545 aa2.8□□□□□ -1.96
VPS53YJL029C YHR212W-AP0CX91 67 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 86.9 ms