RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C PDR18P53756 1333 aa1.96□□□□□ -2.1
RRI1YDL216C APC1P53886 1748 aa1.96□□□□□ -2.1
RRI1YDL216C TUS1Q06412 1307 aa1.96□□□□□ -2.1
RRI1YDL216C TY4B-HP0C2J7 1802 aa1.96□□□□□ -2.1
RRI1YDL216C TY4B-JP47024 1803 aa1.96□□□□□ -2.1
RRI1YDL216C SEC4P07560 215 aaKnown RBP1.95□□□□□ -2.1
RRI1YDL216C GCN3P14741 305 aa1.95□□□□□ -2.1
RRI1YDL216C STE18P18852 110 aa1.95□□□□□ -2.1
RRI1YDL216C COQ1P18900 473 aa1.95□□□□□ -2.1
RRI1YDL216C MGM101P32787 269 aaKnown RBP1.95□□□□□ -2.1
RRI1YDL216C UTP30P36144 274 aaKnown RBP1.95□□□□□ -2.1
RRI1YDL216C YBR209WP38311 105 aa1.95□□□□□ -2.1
RRI1YDL216C MSS2P40990 351 aa1.95□□□□□ -2.1
RRI1YDL216C YPL162CQ12042 273 aa1.95□□□□□ -2.1
RRI1YDL216C YPR117WQ06116 2489 aa1.95□□□□□ -2.1
RRI1YDL216C URA5P13298 226 aaKnown RBP1.94□□□□□ -2.1
RRI1YDL216C KSS1P14681 368 aa1.94□□□□□ -2.1
RRI1YDL216C IDH1P28834 360 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
RRI1YDL216C SHE2P36068 246 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
RRI1YDL216C AST2P39945 430 aaKnown RBP1.94□□□□□ -2.1
RRI1YDL216C PDR17P53844 350 aa1.94□□□□□ -2.1
RRI1YDL216C BET1P22804 142 aa1.93□□□□□ -2.1
RRI1YDL216C PRP18P33411 251 aaPredicted RBP1.93□□□□□ -2.1
RRI1YDL216C CBT1P36038 271 aaPredicted RBP1.93□□□□□ -2.1
RRI1YDL216C YBR285WP38354 144 aa1.93□□□□□ -2.1
RRI1YDL216C YNL194CP40169 301 aa1.93□□□□□ -2.1
RRI1YDL216C ERJ5P43613 295 aaPredicted RBP1.93□□□□□ -2.1
RRI1YDL216C EAF6P47128 113 aa1.93□□□□□ -2.1
RRI1YDL216C RAD17P48581 401 aa1.93□□□□□ -2.1
RRI1YDL216C YGR050CP53231 118 aa1.93□□□□□ -2.1
RRI1YDL216C ATG40Q99325 256 aa1.93□□□□□ -2.1
RRI1YDL216C YIL177CP40434 1758 aa1.93□□□□□ -2.1
RRI1YDL216C YJL225CP40889 1758 aa1.93□□□□□ -2.1
RRI1YDL216C QCR8P08525 94 aa1.92□□□□□ -2.1
RRI1YDL216C PTM1P32857 523 aa1.92□□□□□ -2.1
RRI1YDL216C CUS2P53830 285 aaPredicted RBP1.92□□□□□ -2.1
RRI1YDL216C POP3P53833 195 aaPredicted RBP1.92□□□□□ -2.1
RRI1YDL216C YDR249CQ03787 373 aa1.92□□□□□ -2.1
RRI1YDL216C TOR1P35169 2470 aa1.92□□□□□ -2.1
RRI1YDL216C CDC33P07260 213 aaKnown RBP1.91□□□□□ -2.1
RRI1YDL216C MAG1P22134 296 aaKnown RBP1.91□□□□□ -2.1
RRI1YDL216C LSM7P53905 115 aaKnown RBP1.91□□□□□ -2.1
RRI1YDL216C YDL180WQ12301 547 aa1.91□□□□□ -2.1
RRI1YDL216C UBR2Q07963 1872 aa1.9□□□□□ -2.1
RRI1YDL216C RIM15P43565 1770 aa1.9□□□□□ -2.11
RRI1YDL216C YDR157WA0A023PZE8 133 aa1.9□□□□□ -2.11
RRI1YDL216C RPL25P04456 142 aaKnown RBP1.9□□□□□ -2.11
RRI1YDL216C RPB3P16370 318 aaKnown RBP1.9□□□□□ -2.11
RRI1YDL216C TVP38P36164 337 aa1.9□□□□□ -2.11
RRI1YDL216C TRM5P38793 499 aa1.9□□□□□ -2.11
RRI1YDL216C KNH1P50112 268 aa1.9□□□□□ -2.11
RRI1YDL216C CWC23P52868 283 aaPredicted RBP1.9□□□□□ -2.11
RRI1YDL216C PGA2P53903 129 aa1.9□□□□□ -2.11
RRI1YDL216C COG5P53951 403 aa1.9□□□□□ -2.11
RRI1YDL216C YHR214C-EQ8TGK0 99 aa1.9□□□□□ -2.11
RRI1YDL216C MDM32Q12171 622 aa1.89□□□□□ -2.11
RRI1YDL216C GEA1P47102 1408 aaPredicted RBP1.89□□□□□ -2.11
RRI1YDL216C NUP192P47054 1683 aa1.88□□□□□ -2.11
RRI1YDL216C FAS2P19097 1887 aaKnown RBP1.88□□□□□ -2.11
RRI1YDL216C CAT8P39113 1433 aa1.88□□□□□ -2.11
RRI1YDL216C YLR236CA0A023PZG4 107 aa1.88□□□□□ -2.11
RRI1YDL216C MPA43P53583 542 aaPredicted RBP1.88□□□□□ -2.11
RRI1YDL216C YDR274CP87283 123 aa1.88□□□□□ -2.11
RRI1YDL216C PET191Q02772 108 aa1.88□□□□□ -2.11
RRI1YDL216C BNA7Q04066 261 aa1.88□□□□□ -2.11
RRI1YDL216C RNH1Q04740 348 aa1.88□□□□□ -2.11
RRI1YDL216C YFR032C-BQ8TGU2 87 aa1.88□□□□□ -2.11
RRI1YDL216C SIR2P06700 562 aa1.87□□□□□ -2.11
RRI1YDL216C CUP1-1P0CX80 61 aa1.87□□□□□ -2.11
RRI1YDL216C CUP1-2P0CX81 61 aa1.87□□□□□ -2.11
RRI1YDL216C CUE4Q04201 117 aaPredicted RBP1.87□□□□□ -2.11
RRI1YDL216C KRE5P22023 1365 aa1.86□□□□□ -2.11
RRI1YDL216C SRB8P25648 1427 aa1.86□□□□□ -2.11
RRI1YDL216C CPA1P07258 411 aaKnown RBP1.86□□□□□ -2.11
RRI1YDL216C MER1P16523 270 aa1.86□□□□□ -2.11
RRI1YDL216C CKS1P20486 150 aaKnown RBP1.86□□□□□ -2.11
RRI1YDL216C ATP15P21306 62 aa1.86□□□□□ -2.11
RRI1YDL216C YCR087C-AP37263 153 aa1.86□□□□□ -2.11
RRI1YDL216C IKI1P38874 309 aa1.86□□□□□ -2.11
RRI1YDL216C HMF1P40037 129 aaKnown RBP1.86□□□□□ -2.11
RRI1YDL216C YER076CP40049 302 aa1.86□□□□□ -2.11
RRI1YDL216C YNG1Q08465 219 aa1.86□□□□□ -2.11
RRI1YDL216C TY3B-IQ7LHG5 1498 aaKnown RBP1.85□□□□□ -2.11
RRI1YDL216C YRF1-3P0CX14 1859 aa1.85□□□□□ -2.11
RRI1YDL216C YRF1-7P0CX15 1859 aa1.85□□□□□ -2.11
RRI1YDL216C YRF1-6P53819 1859 aa1.85□□□□□ -2.11
RRI1YDL216C OPY1P38271 328 aa1.85□□□□□ -2.11
RRI1YDL216C UBC7Q02159 165 aa1.85□□□□□ -2.11
RRI1YDL216C RSF2P46974 1380 aa1.85□□□□□ -2.11
RRI1YDL216C ARG80P07249 177 aa1.84□□□□□ -2.12
RRI1YDL216C SPS18P32572 300 aa1.84□□□□□ -2.12
RRI1YDL216C TAF14P35189 244 aa1.84□□□□□ -2.12
RRI1YDL216C FIG2P25653 1609 aa1.83□□□□□ -2.12
RRI1YDL216C RPL27AP0C2H6 136 aaKnown RBP1.83□□□□□ -2.12
RRI1YDL216C SEC11P15367 167 aa1.83□□□□□ -2.12
RRI1YDL216C KDX1P36005 433 aa1.83□□□□□ -2.12
RRI1YDL216C HNT1Q04344 158 aaKnown RBP1.83□□□□□ -2.12
RRI1YDL216C YNL146C-AQ3E7Z1 64 aa1.83□□□□□ -2.12
RRI1YDL216C MSB2P32334 1306 aa1.82□□□□□ -2.12
RRI1YDL216C IKI3Q06706 1349 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms