RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C CYC1P00044 109 aaPredicted RBP5.31□□□□□ -1.56
LDB7YBL006C CAP2P13517 287 aa5.31□□□□□ -1.56
LDB7YBL006C MIC12P38341 106 aa5.31□□□□□ -1.56
LDB7YBL006C YPT31P38555 223 aaKnown RBP5.31□□□□□ -1.56
LDB7YBL006C COS8P38723 381 aa5.31□□□□□ -1.56
LDB7YBL006C MRPL49P40858 161 aaPredicted RBP5.31□□□□□ -1.56
LDB7YBL006C GTF1P53260 183 aaPredicted RBP5.31□□□□□ -1.56
LDB7YBL006C SMX3P54999 86 aaPredicted RBP5.31□□□□□ -1.56
LDB7YBL006C FSH2Q05015 223 aa5.31□□□□□ -1.56
LDB7YBL006C YNG1Q08465 219 aa5.31□□□□□ -1.56
LDB7YBL006C PET494P07390 489 aaPredicted RBP5.3□□□□□ -1.56
LDB7YBL006C YCP4P25349 247 aaKnown RBP5.3□□□□□ -1.56
LDB7YBL006C SPT14P32363 452 aa5.3□□□□□ -1.56
LDB7YBL006C PDC2P32896 925 aa5.3□□□□□ -1.56
LDB7YBL006C LAG1P38703 411 aa5.3□□□□□ -1.56
LDB7YBL006C IRC24P40580 263 aa5.3□□□□□ -1.56
LDB7YBL006C ECM27P47144 725 aa5.3□□□□□ -1.56
LDB7YBL006C RAI1P53063 387 aaKnown RBP5.3□□□□□ -1.56
LDB7YBL006C TPN1P53099 579 aa5.3□□□□□ -1.56
LDB7YBL006C CPD1P53314 239 aa5.3□□□□□ -1.56
LDB7YBL006C MSC3Q05812 728 aa5.3□□□□□ -1.56
LDB7YBL006C YPL199CQ08954 240 aa5.3□□□□□ -1.56
LDB7YBL006C ATG5Q12380 294 aa5.3□□□□□ -1.56
LDB7YBL006C HTZ1Q12692 134 aaKnown RBP5.3□□□□□ -1.56
LDB7YBL006C QCR2P07257 368 aa5.29□□□□□ -1.56
LDB7YBL006C TRP4P07285 380 aaPredicted RBP5.29□□□□□ -1.56
LDB7YBL006C YBR184WP38299 523 aa5.29□□□□□ -1.56
LDB7YBL006C MPC2P38857 129 aa5.29□□□□□ -1.56
LDB7YBL006C SSU72P53538 206 aaPredicted RBP5.29□□□□□ -1.56
LDB7YBL006C LSM7P53905 115 aaKnown RBP5.29□□□□□ -1.56
LDB7YBL006C YDR274CP87283 123 aa5.29□□□□□ -1.56
LDB7YBL006C TAR1Q8TGM6 124 aa5.29□□□□□ -1.56
LDB7YBL006C COX2P00410 251 aa5.28□□□□□ -1.56
LDB7YBL006C GRX2P17695 143 aaKnown RBP5.28□□□□□ -1.56
LDB7YBL006C LSM12P38828 187 aaKnown RBP5.28□□□□□ -1.56
LDB7YBL006C YAR068WP39564 161 aa5.28□□□□□ -1.56
LDB7YBL006C NUP42P49686 430 aaKnown RBP5.28□□□□□ -1.56
LDB7YBL006C NIF3P53081 288 aa5.28□□□□□ -1.56
LDB7YBL006C CAX4P53223 239 aa5.28□□□□□ -1.56
LDB7YBL006C LRS4Q04087 347 aaKnown RBP5.28□□□□□ -1.56
LDB7YBL006C PEX10Q05568 337 aa5.28□□□□□ -1.56
LDB7YBL006C PHO92Q06390 306 aa5.28□□□□□ -1.56
LDB7YBL006C RAD28Q12021 506 aa5.28□□□□□ -1.56
LDB7YBL006C ATG31Q12421 196 aa5.28□□□□□ -1.56
LDB7YBL006C YGL258W-AQ3E740 77 aa5.28□□□□□ -1.56
LDB7YBL006C IMD2P38697 523 aaKnown RBP5.27□□□□□ -1.57
LDB7YBL006C GET2P40056 285 aa5.27□□□□□ -1.57
LDB7YBL006C YGR210CP42942 411 aa5.27□□□□□ -1.57
LDB7YBL006C SCW10Q04951 389 aa5.27□□□□□ -1.57
LDB7YBL006C PAM18Q07914 168 aa5.27□□□□□ -1.57
LDB7YBL006C FEX2Q08991 375 aa5.27□□□□□ -1.57
LDB7YBL006C YPR013CQ12145 317 aa5.27□□□□□ -1.57
LDB7YBL006C RPN13O13563 156 aa5.26□□□□□ -1.57
LDB7YBL006C GPM1P00950 247 aaKnown RBP5.26□□□□□ -1.57
LDB7YBL006C YCR016WP25617 290 aaKnown RBP5.26□□□□□ -1.57
LDB7YBL006C UTP11P34247 250 aaPredicted RBP5.26□□□□□ -1.57
LDB7YBL006C QDR3P38227 689 aa5.26□□□□□ -1.57
LDB7YBL006C ERV15P38312 142 aa5.26□□□□□ -1.57
LDB7YBL006C YPI1P43587 155 aa5.26□□□□□ -1.57
LDB7YBL006C BUL1P48524 976 aa5.26□□□□□ -1.57
LDB7YBL006C YGR050CP53231 118 aa5.26□□□□□ -1.57
LDB7YBL006C MSO1P53604 210 aaKnown RBP5.26□□□□□ -1.57
LDB7YBL006C EST3Q03096 181 aa5.26□□□□□ -1.57
LDB7YBL006C TDA6Q06466 467 aa5.26□□□□□ -1.57
LDB7YBL006C TAL1P15019 335 aaKnown RBP5.25□□□□□ -1.57
LDB7YBL006C MRP17P28778 131 aa5.25□□□□□ -1.57
LDB7YBL006C ALK2P32789 676 aaPredicted RBP5.25□□□□□ -1.57
LDB7YBL006C DOG2P38773 246 aa5.25□□□□□ -1.57
LDB7YBL006C DOG1P38774 246 aa5.25□□□□□ -1.57
LDB7YBL006C YER137CP40083 148 aaKnown RBP5.25□□□□□ -1.57
LDB7YBL006C RPA14P50106 137 aa5.25□□□□□ -1.57
LDB7YBL006C NCE103P53615 221 aa5.25□□□□□ -1.57
LDB7YBL006C SWT21P53873 357 aaPredicted RBP5.25□□□□□ -1.57
LDB7YBL006C DYN2Q02647 92 aa5.25□□□□□ -1.57
LDB7YBL006C GEP3Q08622 556 aa5.25□□□□□ -1.57
LDB7YBL006C YCT1Q12235 531 aa5.25□□□□□ -1.57
LDB7YBL006C RDI1Q12434 202 aa5.25□□□□□ -1.57
LDB7YBL006C PRM4Q12498 284 aa5.25□□□□□ -1.57
LDB7YBL006C CYC3P06182 269 aa5.24□□□□□ -1.57
LDB7YBL006C NHP6BP11633 99 aaKnown RBP5.24□□□□□ -1.57
LDB7YBL006C ECM33P38248 429 aaKnown RBP5.24□□□□□ -1.57
LDB7YBL006C BFR1P38934 470 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
LDB7YBL006C VPS28Q02767 242 aa5.24□□□□□ -1.57
LDB7YBL006C RXT3Q07458 294 aa5.24□□□□□ -1.57
LDB7YBL006C YOR352WQ08816 343 aa5.24□□□□□ -1.57
LDB7YBL006C FEX1Q08913 375 aa5.24□□□□□ -1.57
LDB7YBL006C TRM13Q12383 476 aa5.24□□□□□ -1.57
LDB7YBL006C TPI1P00942 248 aaKnown RBP5.23□□□□□ -1.57
LDB7YBL006C URA5P13298 226 aaKnown RBP5.23□□□□□ -1.57
LDB7YBL006C SRL3P36167 246 aa5.23□□□□□ -1.57
LDB7YBL006C CDS1P38221 457 aa5.23□□□□□ -1.57
LDB7YBL006C GPG1P53130 126 aa5.23□□□□□ -1.57
LDB7YBL006C TRI1Q05024 226 aa5.23□□□□□ -1.57
LDB7YBL006C ATG39Q06159 398 aa5.23□□□□□ -1.57
LDB7YBL006C TIM18Q08749 192 aa5.23□□□□□ -1.57
LDB7YBL006C RRT1P38192 103 aa5.22□□□□□ -1.57
LDB7YBL006C WSS1P38838 269 aa5.22□□□□□ -1.57
LDB7YBL006C NSA2P40078 261 aaKnown RBP5.22□□□□□ -1.57
LDB7YBL006C HAM1P47119 197 aaKnown RBP5.22□□□□□ -1.57
LDB7YBL006C ARO8P53090 500 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms