RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene SPO7, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO7	YAL009W	MED4	Q12343	284 aa		4.61	□□□□□ -1.67
SPO7	YAL009W	RPL9A	P05738	191 aa	Known RBP	4.6	□□□□□ -1.67
SPO7	YAL009W	CDC43	P18898	376 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	YMR31	P19955	123 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	MIR1	P23641	311 aa	Known RBP	4.6	□□□□□ -1.67
SPO7	YAL009W	RRF1	P38771	230 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	SER2	P42941	309 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	HOR7	Q05827	59 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	NDE2	Q07500	545 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	NGL1	Q08213	363 aa	Known RBP	4.6	□□□□□ -1.67
SPO7	YAL009W	USV1	Q12132	391 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	BOL1	Q3E793	110 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	PET20	Q99373	253 aa		4.6	□□□□□ -1.67
SPO7	YAL009W	MDM10	P18409	493 aa		4.59	□□□□□ -1.67
SPO7	YAL009W	OLE1	P21147	510 aa	Known RBP	4.59	□□□□□ -1.67
SPO7	YAL009W	YCP4	P25349	247 aa	Known RBP	4.59	□□□□□ -1.67
SPO7	YAL009W	RPA34	P47006	233 aa	Predicted RBP	4.59	□□□□□ -1.67
SPO7	YAL009W	IMD3	P50095	523 aa	Known RBP	4.59	□□□□□ -1.67
SPO7	YAL009W	UBP8	P50102	471 aa		4.59	□□□□□ -1.67
SPO7	YAL009W	CWC23	P52868	283 aa	Predicted RBP	4.59	□□□□□ -1.67
SPO7	YAL009W	RSM27	P53305	110 aa		4.59	□□□□□ -1.67
SPO7	YAL009W	HTB1	P02293	131 aa	Known RBP	4.58	□□□□□ -1.68
SPO7	YAL009W	STF2	P16965	84 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	CPR4	P25334	318 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	ELO2	P25358	347 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	SEC66	P33754	206 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	IPI1	P38803	334 aa	Predicted RBP	4.58	□□□□□ -1.68
SPO7	YAL009W	PHM8	P40025	321 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	SYG1	P40528	902 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	CAB5	Q03941	241 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	VBA1	Q04301	562 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	SCP1	Q08873	200 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	YOR385W	Q08909	290 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	HTZ1	Q12692	134 aa	Known RBP	4.58	□□□□□ -1.68
SPO7	YAL009W	YJR112W-A	Q3E743	109 aa		4.58	□□□□□ -1.68
SPO7	YAL009W	VPS63	O13549	108 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	RPN13	O13563	156 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	NOP1	P15646	327 aa	Known RBP	4.57	□□□□□ -1.68
SPO7	YAL009W	SRY1	P36007	326 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	PAN3	P36102	679 aa	Predicted RBP	4.57	□□□□□ -1.68
SPO7	YAL009W	POP8	P38208	133 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	AIM25	P47140	327 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	MRPL13	Q02204	264 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	YMR181C	Q03231	154 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	THI74	Q04083	370 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	PBP4	Q07362	185 aa	Known RBP	4.57	□□□□□ -1.68
SPO7	YAL009W	HRD1	Q08109	551 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	IRC23	Q08416	157 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	YPL199C	Q08954	240 aa		4.57	□□□□□ -1.68
SPO7	YAL009W	SPT14	P32363	452 aa		4.56	□□□□□ -1.68
SPO7	YAL009W	ATP3	P38077	311 aa	Known RBP	4.56	□□□□□ -1.68
SPO7	YAL009W	GEP4	P38812	185 aa		4.56	□□□□□ -1.68
SPO7	YAL009W	YHR138C	P38841	114 aa	Predicted RBP	4.56	□□□□□ -1.68
SPO7	YAL009W	TOS8	P53147	276 aa		4.56	□□□□□ -1.68
SPO7	YAL009W	RTT103	Q05543	409 aa		4.56	□□□□□ -1.68
SPO7	YAL009W	YBR255C-A	Q3E776	120 aa		4.56	□□□□□ -1.68
SPO7	YAL009W	YPS1	P32329	569 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	NPL6	P32832	435 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	UTP11	P34247	250 aa	Predicted RBP	4.55	□□□□□ -1.68
SPO7	YAL009W	MRPL38	P35996	138 aa	Predicted RBP	4.55	□□□□□ -1.68
SPO7	YAL009W	COS8	P38723	381 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SPO7	YAL009W	ARP3	P47117	449 aa	Known RBP	4.55	□□□□□ -1.68
SPO7	YAL009W	GIM3	P53900	129 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	LSM7	P53905	115 aa	Known RBP	4.55	□□□□□ -1.68
SPO7	YAL009W	YHP1	Q04116	353 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	IZH3	Q07959	543 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	PRM3	Q08931	133 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	ATG5	Q12380	294 aa		4.55	□□□□□ -1.68
SPO7	YAL009W	SOD1	P00445	154 aa	Known RBP	4.54	□□□□□ -1.68
SPO7	YAL009W	YBR144C	P34215	104 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	YKL075C	P36083	450 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	YPT31	P38555	223 aa	Known RBP	4.54	□□□□□ -1.68
SPO7	YAL009W	COX15	P40086	486 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	LST8	P41318	303 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	TPN1	P53099	579 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	PHO92	Q06390	306 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	FEX2	Q08991	375 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	RKI1	Q12189	258 aa		4.54	□□□□□ -1.68
SPO7	YAL009W	TDH1	P00360	332 aa	Known RBP	4.53	□□□□□ -1.68
SPO7	YAL009W	CAP2	P13517	287 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	HYM1	P32464	399 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	CDS1	P38221	457 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	DFG10	P40526	253 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	LSM1	P47017	172 aa	Known RBP	4.53	□□□□□ -1.68
SPO7	YAL009W	YGR219W	P53307	113 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	FSH2	Q05015	223 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	RDI1	Q12434	202 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	PRM4	Q12498	284 aa		4.53	□□□□□ -1.68
SPO7	YAL009W	QCR2	P07257	368 aa		4.52	□□□□□ -1.69
SPO7	YAL009W	YCR016W	P25617	290 aa	Known RBP	4.52	□□□□□ -1.69
SPO7	YAL009W	LAG1	P38703	411 aa		4.52	□□□□□ -1.69
SPO7	YAL009W	RFC2	P40348	353 aa		4.52	□□□□□ -1.69
SPO7	YAL009W	MRPL49	P40858	161 aa	Predicted RBP	4.52	□□□□□ -1.69
SPO7	YAL009W	EST3	Q03096	181 aa		4.52	□□□□□ -1.69
SPO7	YAL009W	PAM18	Q07914	168 aa		4.52	□□□□□ -1.69
SPO7	YAL009W	YOL029C	Q08187	201 aa		4.52	□□□□□ -1.69
SPO7	YAL009W	TAL1	P15019	335 aa	Known RBP	4.51	□□□□□ -1.69
SPO7	YAL009W	ERV1	P27882	189 aa		4.51	□□□□□ -1.69
SPO7	YAL009W	UTR5	P32630	166 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms