RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 rp9P97762 213 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Xxylt1Q3U4G3 392 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Pid1Q3UBG2 217 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Nat8lQ3UGX3 299 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Nt5dc3Q3UHB1 546 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Odr4Q4PJX1 447 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Dlg4Q62108 724 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Capn3Q64691 821 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 TbataQ7TSD4 393 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Trim65Q8BFW4 522 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Nat14Q8BVG8 206 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Pgm2l1Q8CAA7 621 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Lonp1Q8CGK3 949 aaKnown RBP12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 TgdsQ8VDR7 355 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Arhgef3Q91X46 524 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Atad3Q925I1 591 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Trmt10bQ9D075 318 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Lman1Q9D0F3 517 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Mrps9Q9D7N3 390 aaKnown RBP12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Zbtb12Q9Z150 459 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Rtl9Q32KG4 1339 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Cntnap2Q9CPW0 1332 aa12.71□□□□□ -0.37
Ufd1-201ENSMUST00000005394 Col2a1P28481 1487 aa12.71□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Zc3h7aE9PWW6 970 aaKnown RBP12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Kbtbd2G3X9X1 623 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Cyth3O08967 399 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Nedd9O35177 833 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Tfap2aP34056 437 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Fam193bQ3U2K0 892 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Kctd1Q5M956 257 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Lamc2Q61092 1191 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Ksr1Q61097 873 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Gata6Q61169 589 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Pla2g4cQ64GA5 597 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Ttc39bQ8BYY4 617 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 A430089I19RikQ8C9W1 407 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Serpinb13Q8CDC0 389 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Apbb1ipQ8R5A3 670 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Taf11Q99JX1 211 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Cdk5rap3Q99LM2 503 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 TtpalQ9D3D0 343 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Sun1Q9D666 913 aaKnown RBP12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Slc25a19Q9DAM5 318 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Prl2b1Q9DAZ2 228 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 IdeQ9JHR7 1019 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Ptpn4Q9WU22 926 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Plxnb2B2RXS4 1842 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Shoc2O88520 582 aaKnown RBP12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Adam15O88839 864 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Cyp11b2P15539 500 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Hoxd11P23813 323 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Alox15P39654 663 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Syt2P46097 422 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Atp5bP56480 529 aaKnown RBP12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Cdk7Q03147 346 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Spink5Q148R4 1017 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Styk1Q6J9G1 429 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Acap2Q6ZQK5 770 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Tmem117Q8BH18 514 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Dus1lQ8C2P3 475 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Riox2Q8CD15 465 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Lin52Q8CD94 116 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Kat5Q8CHK4 513 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Depdc1aQ8CIG0 804 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Arfip2Q8K221 341 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Clptm1Q8VBZ3 664 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Slc44a4Q91VA1 707 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Def8Q99J78 448 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Batf3Q9D275 118 aa12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 SmapQ9R0P4 181 aaKnown RBP12.7□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Mageb2A2AHM0 380 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Znf804aA2AKY4 1200 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Slfn9B1ARD6 910 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Wdr95D3Z7A8 784 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Gm5795E9PZN8 263 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Rad51bO35719 350 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 CaluO35887 315 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Mgat1P27808 447 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Rhox5P52651 210 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 LipeP54310 759 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 RalaP63321 206 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 CblbQ3TTA7 982 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Klra7Q60654 280 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Tmem130Q6NXM3 419 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Rhot1Q8BG51 631 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Tyw3Q8BSA9 257 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Ppm1kQ8BXN7 372 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Rtp1Q8C8C1 263 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Fbxo43Q8CDI2 640 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Trappc12Q8K2L8 797 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Pex19Q8VCI5 299 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Gpsm2Q8VDU0 679 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Nmrk1Q91W63 195 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Ier5lQ99J55 406 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Pls3Q99K51 630 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Ndc80Q9D0F1 642 aaKnown RBP12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 C1qtnf1Q9QXP7 281 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 Jag1Q9QXX0 1218 aa12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 PygmQ9WUB3 842 aaKnown RBP12.69□□□□□ -0.38
Ufd1-201ENSMUST00000005394 SynrgQ5SV85 1306 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms