RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	MRPL27	P36526	146 aa	Predicted RBP	2.24	□□□□□ -2.05
HAA1	YPR008W	RRF1	P38771	230 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	AVT7	P40501	490 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YJL016W	P47072	561 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YGL159W	P53110	370 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YMR181C	Q03231	154 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	DIG2	Q03373	323 aa	Known RBP	2.24	□□□□□ -2.05
HAA1	YPR008W	RAF1	Q06891	181 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YOL024W	Q08172	172 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YNG1	Q08465	219 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YPL278C	Q08990	100 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	YDL180W	Q12301	547 aa		2.24	□□□□□ -2.05
HAA1	YPR008W	TRA1	P38811	3744 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
HAA1	YPR008W	CDC28	P00546	298 aa	Known RBP	2.23	□□□□□ -2.05
HAA1	YPR008W	RFA3	P26755	122 aa	Known RBP	2.23	□□□□□ -2.05
HAA1	YPR008W	MRP17	P28778	131 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	VMA5	P31412	392 aa	Known RBP	2.23	□□□□□ -2.05
HAA1	YPR008W	PAN3	P36102	679 aa	Predicted RBP	2.23	□□□□□ -2.05
HAA1	YPR008W	YER137C	P40083	148 aa	Known RBP	2.23	□□□□□ -2.05
HAA1	YPR008W	ECM27	P47144	725 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	SSN8	P47821	323 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	OKP1	P53298	406 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	RSM27	P53305	110 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	GIM3	P53900	129 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
HAA1	YPR008W	HAL1	Q01766	294 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	PLP1	Q04004	230 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	IZH2	Q12442	317 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	ERP4	Q12450	207 aa		2.23	□□□□□ -2.05
HAA1	YPR008W	TRR1	P29509	319 aa	Known RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	SUA5	P32579	426 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	AGA2	P32781	87 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	FMT1	P32785	401 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YBL010C	P32788	280 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	VAM7	P32912	316 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YMR262W	P38430	313 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YER084W	P40057	128 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	MOB2	P43563	287 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	RPS0B	P46654	252 aa	Known RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	LSM1	P47017	172 aa	Known RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	NSA1	P53136	463 aa	Predicted RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	RCE1	Q03530	315 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	MRX9	Q07349	420 aa	Known RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	FIT3	Q08907	204 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	USB1	Q12208	290 aa	Known RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	RTR2	Q12378	196 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	HUT1	Q12520	339 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	PET20	Q99373	253 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	ARO3	P14843	370 aa	Known RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	IFM1	P25038	676 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	ATG15	P25641	520 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	MRPS5	P33759	307 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YKL063C	P35725	167 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	POP8	P38208	133 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YIP5	P53108	310 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	RPN14	P53196	417 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	SKO1	Q02100	647 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	PRM15	Q03262	622 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YML018C	Q03730	393 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	YDR391C	Q04170	232 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	SYM1	Q06563	197 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	PRM4	Q12498	284 aa		2.22	□□□□□ -2.05
HAA1	YPR008W	FOL3	Q12676	427 aa	Predicted RBP	2.22	□□□□□ -2.05
HAA1	YPR008W	MSI1	P13712	422 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	SAG1	P20840	650 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	PEX4	P29340	183 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	MCH2	P36032	473 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	GEP4	P38812	185 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
HAA1	YPR008W	GNA1	P43577	159 aa	Predicted RBP	2.21	□□□□□ -2.06
HAA1	YPR008W	SNX4	P47057	423 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	YJR011C	P47086	261 aa	Predicted RBP	2.21	□□□□□ -2.06
HAA1	YPR008W	SIP18	P50263	79 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	UFD1	P53044	361 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	ALG9	P53868	555 aa	Known RBP	2.21	□□□□□ -2.06
HAA1	YPR008W	RFU1	Q08003	200 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	SCP1	Q08873	200 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	VAM3	Q12241	283 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	BBP1	Q12365	385 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	FMP16	Q12497	93 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	YGL194C-A	Q2V2P6	80 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	TOR1	P35169	2470 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	TPI1	P00942	248 aa	Known RBP	2.21	□□□□□ -2.06
HAA1	YPR008W	HEM4	P06174	275 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	LSB5	P25369	354 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	YPC1	P38298	316 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	VMA7	P39111	118 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	SEN34	P39707	275 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	YER079W	P40052	210 aa	Known RBP	2.21	□□□□□ -2.06
HAA1	YPR008W	SWM2	P40342	146 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	FLX1	P40464	311 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	TAD2	P47058	250 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	NIF3	P53081	288 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	JAC1	P53193	184 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	SUR7	P54003	302 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	YDR248C	Q03786	193 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	API2	Q04413	109 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	YOR186W	Q08560	144 aa		2.21	□□□□□ -2.06
HAA1	YPR008W	FEX2	Q08991	375 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms