RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeastyeast

Gene HAL1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HAL1YPR005C YLR053CQ12026 108 aa4□□□□□ -1.77
HAL1YPR005C MCP1Q12106 302 aa4□□□□□ -1.77
HAL1YPR005C PET20Q99373 253 aa4□□□□□ -1.77
HAL1YPR005C URA5P13298 226 aaKnown RBP3.99□□□□□ -1.77
HAL1YPR005C DER1P38307 211 aa3.99□□□□□ -1.77
HAL1YPR005C ICE2P40499 491 aa3.99□□□□□ -1.77
HAL1YPR005C YLR031WQ07978 186 aa3.99□□□□□ -1.77
HAL1YPR005C AKR2Q12013 749 aa3.99□□□□□ -1.77
HAL1YPR005C YPR014CQ6B0W2 109 aa3.99□□□□□ -1.77
HAL1YPR005C RPB3P16370 318 aaKnown RBP3.98□□□□□ -1.77
HAL1YPR005C AHC2P25649 128 aa3.98□□□□□ -1.77
HAL1YPR005C SKI6P46948 246 aaPredicted RBP3.98□□□□□ -1.77
HAL1YPR005C SWP1Q02795 286 aa3.98□□□□□ -1.77
HAL1YPR005C PLP1Q04004 230 aa3.98□□□□□ -1.77
HAL1YPR005C FEX1Q08913 375 aa3.98□□□□□ -1.77
HAL1YPR005C FEX2Q08991 375 aa3.98□□□□□ -1.77
HAL1YPR005C NSL1Q12143 216 aa3.98□□□□□ -1.77
HAL1YPR005C FMP23P38231 175 aa3.97□□□□□ -1.77
HAL1YPR005C MAK3Q03503 176 aa3.97□□□□□ -1.77
HAL1YPR005C TSC3Q3E790 80 aa3.97□□□□□ -1.77
HAL1YPR005C VMA11P32842 164 aa3.96□□□□□ -1.78
HAL1YPR005C AIM2P39721 246 aa3.96□□□□□ -1.78
HAL1YPR005C SMD3P43321 101 aaKnown RBP3.96□□□□□ -1.78
HAL1YPR005C DSK2P48510 373 aa3.96□□□□□ -1.78
HAL1YPR005C SBH2P52871 88 aa3.96□□□□□ -1.78
HAL1YPR005C AIF1P52923 378 aa3.96□□□□□ -1.78
HAL1YPR005C HNT1Q04344 158 aaKnown RBP3.96□□□□□ -1.78
HAL1YPR005C DYN3Q04949 312 aa3.96□□□□□ -1.78
HAL1YPR005C RPS28BP0C0X0 67 aaKnown RBP3.95□□□□□ -1.78
HAL1YPR005C CCA1P21269 546 aa3.95□□□□□ -1.78
HAL1YPR005C SRP102P36057 244 aaPredicted RBP3.95□□□□□ -1.78
HAL1YPR005C CTR2P38865 189 aa3.95□□□□□ -1.78
HAL1YPR005C PIR5P46999 287 aa3.95□□□□□ -1.78
HAL1YPR005C LSM1P47017 172 aaKnown RBP3.95□□□□□ -1.78
HAL1YPR005C GPI17Q04080 534 aa3.95□□□□□ -1.78
HAL1YPR005C DGA1Q08650 418 aa3.95□□□□□ -1.78
HAL1YPR005C MHT1Q12525 324 aa3.95□□□□□ -1.78
HAL1YPR005C RPS28AQ3E7X9 67 aaPredicted RBP3.95□□□□□ -1.78
HAL1YPR005C MSW1P04803 379 aa3.94□□□□□ -1.78
HAL1YPR005C MRPS28P21771 286 aa3.94□□□□□ -1.78
HAL1YPR005C AGA2P32781 87 aa3.94□□□□□ -1.78
HAL1YPR005C YKL102CP34249 101 aa3.94□□□□□ -1.78
HAL1YPR005C TVP38P36164 337 aa3.94□□□□□ -1.78
HAL1YPR005C EDC3P39998 551 aaKnown RBP3.94□□□□□ -1.78
HAL1YPR005C YJR111CP47148 283 aaKnown RBP3.94□□□□□ -1.78
HAL1YPR005C CAB4P53332 305 aa3.94□□□□□ -1.78
HAL1YPR005C RDI1Q12434 202 aa3.94□□□□□ -1.78
HAL1YPR005C OCH1P31755 480 aa3.93□□□□□ -1.78
HAL1YPR005C AVT2P39981 480 aa3.93□□□□□ -1.78
HAL1YPR005C YER084WP40057 128 aa3.93□□□□□ -1.78
HAL1YPR005C PGA1P53896 198 aa3.93□□□□□ -1.78
HAL1YPR005C YPR127WQ06494 345 aa3.93□□□□□ -1.78
HAL1YPR005C MPD1Q12404 318 aaKnown RBP3.93□□□□□ -1.78
HAL1YPR005C OPY1P38271 328 aa3.92□□□□□ -1.78
HAL1YPR005C IES4Q08561 116 aa3.92□□□□□ -1.78
HAL1YPR005C YOR342CQ12182 319 aa3.92□□□□□ -1.78
HAL1YPR005C TIM9O74700 87 aa3.91□□□□□ -1.78
HAL1YPR005C MRPL17P36528 281 aa3.91□□□□□ -1.78
HAL1YPR005C COS6P53344 381 aa3.91□□□□□ -1.78
HAL1YPR005C HSK3P69852 69 aa3.91□□□□□ -1.78
HAL1YPR005C TMA20P89886 181 aaPredicted RBP3.91□□□□□ -1.78
HAL1YPR005C KRE1P17260 313 aa3.9□□□□□ -1.79
HAL1YPR005C ATP15P21306 62 aa3.9□□□□□ -1.79
HAL1YPR005C RSA4P25382 515 aaKnown RBP3.9□□□□□ -1.79
HAL1YPR005C ACP1P32463 125 aa3.9□□□□□ -1.79
HAL1YPR005C YHL026CP38740 315 aa3.9□□□□□ -1.79
HAL1YPR005C SER2P42941 309 aa3.9□□□□□ -1.79
HAL1YPR005C MNN5P46982 586 aa3.9□□□□□ -1.79
HAL1YPR005C YDR476CQ03362 224 aa3.9□□□□□ -1.79
HAL1YPR005C PDR18P53756 1333 aa3.9□□□□□ -1.79
HAL1YPR005C PRM10P42946 383 aa3.89□□□□□ -1.79
HAL1YPR005C SNX4P47057 423 aa3.89□□□□□ -1.79
HAL1YPR005C TDA4P47153 279 aa3.89□□□□□ -1.79
HAL1YPR005C ARR2Q06597 130 aa3.89□□□□□ -1.79
HAL1YPR005C YOR1P53049 1477 aa3.88□□□□□ -1.79
HAL1YPR005C MDH3P32419 343 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
HAL1YPR005C SCM4P32564 187 aa3.88□□□□□ -1.79
HAL1YPR005C PAN3P36102 679 aaPredicted RBP3.88□□□□□ -1.79
HAL1YPR005C SLM6P38343 150 aa3.88□□□□□ -1.79
HAL1YPR005C YER134CP40081 178 aa3.88□□□□□ -1.79
HAL1YPR005C PGD1P40356 397 aa3.88□□□□□ -1.79
HAL1YPR005C YGL088WP53151 121 aa3.88□□□□□ -1.79
HAL1YPR005C YDC1Q02896 317 aa3.88□□□□□ -1.79
HAL1YPR005C SPG3Q04398 127 aaPredicted RBP3.88□□□□□ -1.79
HAL1YPR005C NEJ1Q06148 342 aa3.88□□□□□ -1.79
HAL1YPR005C YPR195CQ06594 109 aa3.88□□□□□ -1.79
HAL1YPR005C CPA1P07258 411 aaKnown RBP3.87□□□□□ -1.79
HAL1YPR005C YCR023CP25351 611 aa3.87□□□□□ -1.79
HAL1YPR005C BUB2P26448 306 aaPredicted RBP3.87□□□□□ -1.79
HAL1YPR005C NSG1P38837 291 aa3.87□□□□□ -1.79
HAL1YPR005C GVP36P40531 326 aaKnown RBP3.87□□□□□ -1.79
HAL1YPR005C NQM1P53228 333 aaPredicted RBP3.87□□□□□ -1.79
HAL1YPR005C MPA43P53583 542 aaPredicted RBP3.87□□□□□ -1.79
HAL1YPR005C EFG1Q3E705 233 aaKnown RBP3.87□□□□□ -1.79
HAL1YPR005C RPL26AP05743 127 aaKnown RBP3.86□□□□□ -1.79
HAL1YPR005C SPO13P23624 291 aa3.86□□□□□ -1.79
HAL1YPR005C YHR180WP38868 163 aa3.86□□□□□ -1.79
HAL1YPR005C YEA4P40004 342 aa3.86□□□□□ -1.79
HAL1YPR005C RFC2P40348 353 aa3.86□□□□□ -1.79
HAL1YPR005C GPI14P47088 403 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms