RNA–Protein interactions for RNA: YOR115C

TRS33, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS33, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS33	YOR115C	HHT1	P61830	136 aa		4.18	□□□□□ -1.74
TRS33	YOR115C	YCL001W-A	P87012	153 aa		4.18	□□□□□ -1.74
TRS33	YOR115C	RSM23	Q01163	450 aa		4.18	□□□□□ -1.74
TRS33	YOR115C	ADD37	Q03233	198 aa		4.18	□□□□□ -1.74
TRS33	YOR115C	DXO1	Q06349	442 aa		4.18	□□□□□ -1.74
TRS33	YOR115C	SDO1	Q07953	250 aa	Known RBP	4.18	□□□□□ -1.74
TRS33	YOR115C	NCE102	Q12207	173 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
TRS33	YOR115C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
TRS33	YOR115C	CDC28	P00546	298 aa	Known RBP	4.17	□□□□□ -1.74
TRS33	YOR115C	ERG2	P32352	222 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	IKI1	P38874	309 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	HXT14	P42833	540 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	IKS1	P47042	667 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	SOL1	P50278	321 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	PCP1	P53259	346 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	DIG2	Q03373	323 aa	Known RBP	4.17	□□□□□ -1.74
TRS33	YOR115C	HRI1	Q05905	244 aa	Known RBP	4.17	□□□□□ -1.74
TRS33	YOR115C	MRX9	Q07349	420 aa	Known RBP	4.17	□□□□□ -1.74
TRS33	YOR115C	GRE1	Q08969	168 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	AKR2	Q12013	749 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	YOR015W	Q12169	119 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	COX19	Q3E731	98 aa		4.17	□□□□□ -1.74
TRS33	YOR115C	CDC39	P25655	2108 aa	Known RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	GDH1	P07262	454 aa	Known RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	YFR010W-A	P0C5N0	62 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	CDC43	P18898	376 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	DAL82	P21705	255 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	PEX4	P29340	183 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	RPB7	P34087	171 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	ATG8	P38182	117 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
TRS33	YOR115C	PGD1	P40356	397 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	POG1	P40473	351 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	ECO1	P43605	281 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	YJR012C	P47087	207 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	MOG1	P47123	218 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	SLX9	P53251	210 aa	Predicted RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	YIF1	P53845	314 aa	Known RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	MRPS17	Q03246	237 aa	Predicted RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	YMR279C	Q03263	540 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	NUP53	Q03790	475 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	GMC1	Q04399	608 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	DPB4	Q04603	196 aa	Known RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	YMR253C	Q04835	414 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	COQ11	Q05892	277 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	MDM30	Q05930	598 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	YOL118C	Q08259	102 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	YOR186W	Q08560	144 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	RDL1	Q12305	139 aa	Known RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	SNU23	Q12368	194 aa	Predicted RBP	4.16	□□□□□ -1.74
TRS33	YOR115C	YOR192C-C	Q3E736	78 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	COA2	Q3E823	68 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	HUG1	Q6Q5K6	68 aa		4.16	□□□□□ -1.74
TRS33	YOR115C	DEG1	P31115	442 aa	Known RBP	4.15	□□□□□ -1.75
TRS33	YOR115C	SWD3	P38123	315 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	RIB5	P38145	238 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	IMD2	P38697	523 aa	Known RBP	4.15	□□□□□ -1.75
TRS33	YOR115C	FLO5	P38894	1075 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	POP2	P39008	433 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	YEA4	P40004	342 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	RPL13B	P40212	199 aa	Known RBP	4.15	□□□□□ -1.75
TRS33	YOR115C	VMA21	P41806	77 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	TMA23	Q03525	211 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	YDR415C	Q04033	374 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS33	YOR115C	YDR387C	Q04162	555 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	YMR082C	Q04276	118 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	FIT1	Q04433	528 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	MPD1	Q12404	318 aa	Known RBP	4.15	□□□□□ -1.75
TRS33	YOR115C	RPL13A	Q12690	199 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS33	YOR115C	YLR365W	Q7LIF2	110 aa		4.15	□□□□□ -1.75
TRS33	YOR115C	YPT1	P01123	206 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	RPL25	P04456	142 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	RPB3	P16370	318 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	APA2	P22108	325 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	YCR025C	P25352	136 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	NTF2	P33331	125 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	MRPS5	P33759	307 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	ERV15	P38312	142 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	MTC6	P38849	526 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	SPC25	P40014	221 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	YER079W	P40052	210 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	XBP1	P40489	647 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	GTT1	P40582	234 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	RPA34	P47006	233 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	MSO1	P53604	210 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	MEH1	Q02205	184 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	YDR286C	Q05530	114 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	RFU1	Q08003	200 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	ZEO1	Q08245	113 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	RAD28	Q12021	506 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	USB1	Q12208	290 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	FRE8	Q12209	686 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	IZH2	Q12442	317 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	AIM45	Q12480	344 aa	Known RBP	4.14	□□□□□ -1.75
TRS33	YOR115C	YPR108W-A	Q3E7B3	70 aa		4.14	□□□□□ -1.75
TRS33	YOR115C	TOR2	P32600	2474 aa	Known RBP	4.13	□□□□□ -1.75
TRS33	YOR115C	SPS4	P09937	338 aa		4.13	□□□□□ -1.75
TRS33	YOR115C	MSI1	P13712	422 aa		4.13	□□□□□ -1.75
TRS33	YOR115C	SAG1	P20840	650 aa		4.13	□□□□□ -1.75
TRS33	YOR115C	YCR101C	P25607	182 aa		4.13	□□□□□ -1.75
TRS33	YOR115C	MTR2	P34232	184 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms