RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP53	YMR153W	POP8	P38208	133 aa		6.09	□□□□□ -1.43
NUP53	YMR153W	POP2	P39008	433 aa		6.09	□□□□□ -1.43
NUP53	YMR153W	MSE1	P48525	536 aa		6.09	□□□□□ -1.43
NUP53	YMR153W	UBP8	P50102	471 aa		6.09	□□□□□ -1.43
NUP53	YMR153W	CAB5	Q03941	241 aa		6.09	□□□□□ -1.43
NUP53	YMR153W	SCP1	Q08873	200 aa		6.09	□□□□□ -1.43
NUP53	YMR153W	HTB1	P02293	131 aa	Known RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	MIR1	P23641	311 aa	Known RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	SAP30	P38429	201 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	YHR138C	P38841	114 aa	Predicted RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	SYM1	Q06563	197 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	MRPL23	Q12487	163 aa	Predicted RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	BOL1	Q3E793	110 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	RPN13	O13563	156 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	TAL1	P15019	335 aa	Known RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	RPD3	P32561	433 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	UTP11	P34247	250 aa	Predicted RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	GPP2	P40106	250 aa	Known RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	LSM1	P47017	172 aa	Known RBP	6.08	□□□□□ -1.44
NUP53	YMR153W	NRG1	Q03125	231 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	VBA1	Q04301	562 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	HRD1	Q08109	551 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	YLR122C	Q12312	125 aa		6.08	□□□□□ -1.44
NUP53	YMR153W	YCP4	P25349	247 aa	Known RBP	6.07	□□□□□ -1.44
NUP53	YMR153W	HYM1	P32464	399 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	LAG1	P38703	411 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	GEP4	P38812	185 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	IMD3	P50095	523 aa	Known RBP	6.07	□□□□□ -1.44
NUP53	YMR153W	TOS8	P53147	276 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	GTF1	P53260	183 aa	Predicted RBP	6.07	□□□□□ -1.44
NUP53	YMR153W	LSM7	P53905	115 aa	Known RBP	6.07	□□□□□ -1.44
NUP53	YMR153W	VPS71	Q03433	280 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	THI74	Q04083	370 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	RTT103	Q05543	409 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	YOR385W	Q08909	290 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	YJR112W-A	Q3E743	109 aa		6.07	□□□□□ -1.44
NUP53	YMR153W	CYC1	P00044	109 aa	Predicted RBP	6.06	□□□□□ -1.44
NUP53	YMR153W	GPM1	P00950	247 aa	Known RBP	6.06	□□□□□ -1.44
NUP53	YMR153W	MSN1	P22148	382 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	CPR4	P25334	318 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	LSM12	P38828	187 aa	Known RBP	6.06	□□□□□ -1.44
NUP53	YMR153W	IRC24	P40580	263 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	YJL163C	P46996	555 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	CRH1	P53301	507 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	YOL029C	Q08187	201 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	RDI1	Q12434	202 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	LAS17	Q12446	633 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	HBN1	Q96VH4	193 aa		6.06	□□□□□ -1.44
NUP53	YMR153W	YHR212W-A	P0CX91	67 aa		6.05	□□□□□ -1.44
NUP53	YMR153W	MRS4	P23500	304 aa		6.05	□□□□□ -1.44
NUP53	YMR153W	ELO2	P25358	347 aa		6.05	□□□□□ -1.44
NUP53	YMR153W	SPT14	P32363	452 aa		6.05	□□□□□ -1.44
NUP53	YMR153W	MRPL38	P35996	138 aa	Predicted RBP	6.05	□□□□□ -1.44
NUP53	YMR153W	YKR045C	P36138	183 aa		6.05	□□□□□ -1.44
NUP53	YMR153W	ATP3	P38077	311 aa	Known RBP	6.05	□□□□□ -1.44
NUP53	YMR153W	COX18	P53239	316 aa		6.05	□□□□□ -1.44
NUP53	YMR153W	VPS63	O13549	108 aa		6.04	□□□□□ -1.44
NUP53	YMR153W	NOP1	P15646	327 aa	Known RBP	6.04	□□□□□ -1.44
NUP53	YMR153W	RFC2	P40348	353 aa		6.04	□□□□□ -1.44
NUP53	YMR153W	YML122C	Q03207	126 aa		6.04	□□□□□ -1.44
NUP53	YMR153W	FSH2	Q05015	223 aa		6.04	□□□□□ -1.44
NUP53	YMR153W	PBP4	Q07362	185 aa	Known RBP	6.04	□□□□□ -1.44
NUP53	YMR153W	CAP2	P13517	287 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	STF2	P16965	84 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	YBR144C	P34215	104 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	COX15	P40086	486 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	TPN1	P53099	579 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	YNG1	Q08465	219 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	PRM3	Q08931	133 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	ATG31	Q12421	196 aa		6.03	□□□□□ -1.44
NUP53	YMR153W	YPS1	P32329	569 aa		6.02	□□□□□ -1.45
NUP53	YMR153W	YPT31	P38555	223 aa	Known RBP	6.02	□□□□□ -1.45
NUP53	YMR153W	YJR012C	P47087	207 aa		6.02	□□□□□ -1.45
NUP53	YMR153W	YMR181C	Q03231	154 aa		6.02	□□□□□ -1.45
NUP53	YMR153W	FEX2	Q08991	375 aa		6.02	□□□□□ -1.45
NUP53	YMR153W	ATG5	Q12380	294 aa		6.02	□□□□□ -1.45
NUP53	YMR153W	TDH1	P00360	332 aa	Known RBP	6.01	□□□□□ -1.45
NUP53	YMR153W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.01	□□□□□ -1.45	not detected
NUP53	YMR153W	LST8	P41318	303 aa		6.01	□□□□□ -1.45
NUP53	YMR153W	CAB4	P53332	305 aa		6.01	□□□□□ -1.45
NUP53	YMR153W	PAM18	Q07914	168 aa		6.01	□□□□□ -1.45
NUP53	YMR153W	IRC23	Q08416	157 aa		6.01	□□□□□ -1.45
NUP53	YMR153W	RKI1	Q12189	258 aa		6.01	□□□□□ -1.45
NUP53	YMR153W	PRM4	Q12498	284 aa		6.01	□□□□□ -1.45
NUP53	YMR153W	QCR2	P07257	368 aa		6	□□□□□ -1.45
NUP53	YMR153W	YBR184W	P38299	523 aa		6	□□□□□ -1.45
NUP53	YMR153W	ERV15	P38312	142 aa		6	□□□□□ -1.45
NUP53	YMR153W	AIM20	P40451	204 aa		6	□□□□□ -1.45
NUP53	YMR153W	DFG10	P40526	253 aa		6	□□□□□ -1.45
NUP53	YMR153W	ARP3	P47117	449 aa	Known RBP	6	□□□□□ -1.45
NUP53	YMR153W	ERG25	P53045	309 aa		6	□□□□□ -1.45
NUP53	YMR153W	SMX3	P54999	86 aa	Predicted RBP	6	□□□□□ -1.45
NUP53	YMR153W	HED1	Q03937	162 aa		6	□□□□□ -1.45
NUP53	YMR153W	YHP1	Q04116	353 aa		6	□□□□□ -1.45
NUP53	YMR153W	PHO92	Q06390	306 aa		6	□□□□□ -1.45
NUP53	YMR153W	FEX1	Q08913	375 aa		6	□□□□□ -1.45
NUP53	YMR153W	TRM13	Q12383	476 aa		6	□□□□□ -1.45
NUP53	YMR153W	SPS2	P08459	502 aa		5.99	□□□□□ -1.45
NUP53	YMR153W	GPG1	P53130	126 aa		5.99	□□□□□ -1.45
NUP53	YMR153W	SSU72	P53538	206 aa	Predicted RBP	5.99	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms