RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFX1	YLR176C	MGM101	P32787	269 aa	Known RBP	0.64	□□□□□ -2.31
RFX1	YLR176C	CUS2	P53830	285 aa	Predicted RBP	0.64	□□□□□ -2.31
RFX1	YLR176C	VAR1	P02381	398 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	RPB3	P16370	318 aa	Known RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	STE18	P18852	110 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	ATP15	P21306	62 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	PRP18	P33411	251 aa	Predicted RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
RFX1	YLR176C	RAD17	P48581	401 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	CDC33	P07260	213 aa	Known RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	COQ1	P18900	473 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	VMA22	P38784	181 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	RIO2	P40160	425 aa	Known RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	MSS2	P40990	351 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	IRC18	P47056	224 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	CWC23	P52868	283 aa	Predicted RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	LSM7	P53905	115 aa	Known RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	CUE4	Q04201	117 aa	Predicted RBP	0.63	□□□□□ -2.31
RFX1	YLR176C	YOL160W	Q08321	113 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	RAD28	Q12021	506 aa		0.63	□□□□□ -2.31
RFX1	YLR176C	RPL25	P04456	142 aa	Known RBP	0.62	□□□□□ -2.31
RFX1	YLR176C	ARG80	P07249	177 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	RPL27A	P0C2H6	136 aa	Known RBP	0.62	□□□□□ -2.31
RFX1	YLR176C	SPS18	P32572	300 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	OPY1	P38271	328 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	COG5	P53951	403 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	SEC11	P15367	167 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	MER1	P16523	270 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	MAG1	P22134	296 aa	Known RBP	0.62	□□□□□ -2.31
RFX1	YLR176C	YNG1	Q08465	219 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	NCB2	Q92317	146 aa		0.62	□□□□□ -2.31
RFX1	YLR176C	MDM32	Q12171	622 aa		0.61	□□□□□ -2.31
RFX1	YLR176C	AQY2	P0CD90	149 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	CKS1	P20486	150 aa	Known RBP	0.6	□□□□□ -2.31
RFX1	YLR176C	TRM5	P38793	499 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	GIS3	Q12418	502 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	TAF14	P35189	244 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	KDX1	P36005	433 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	YCR087C-A	P37263	153 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	TVP23	P38962	199 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	YEL067C	P39978	195 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	RPL37A	P49166	88 aa	Known RBP	0.6	□□□□□ -2.31
RFX1	YLR176C	MPC3	P53311	146 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	HNT1	Q04344	158 aa	Known RBP	0.6	□□□□□ -2.31
RFX1	YLR176C	YHR007C-A	Q07074	71 aa		0.6	□□□□□ -2.31
RFX1	YLR176C	IKI3	Q06706	1349 aa	Known RBP	0.6	□□□□□ -2.31
RFX1	YLR176C	HMF1	P40037	129 aa	Known RBP	0.59	□□□□□ -2.31
RFX1	YLR176C	YAE1	P47118	141 aa	Predicted RBP	0.59	□□□□□ -2.31
RFX1	YLR176C	AIM25	P47140	327 aa		0.59	□□□□□ -2.31
RFX1	YLR176C	ARO8	P53090	500 aa	Known RBP	0.59	□□□□□ -2.31
RFX1	YLR176C	RCE1	Q03530	315 aa		0.59	□□□□□ -2.31
RFX1	YLR176C	RUD3	Q12234	484 aa	Known RBP	0.59	□□□□□ -2.31
RFX1	YLR176C	SPO13	P23624	291 aa		0.59	□□□□□ -2.32
RFX1	YLR176C	IKI1	P38874	309 aa		0.59	□□□□□ -2.32
RFX1	YLR176C	YER034W	P40022	185 aa	Known RBP	0.59	□□□□□ -2.32
RFX1	YLR176C	YPL073C	P40323	161 aa		0.59	□□□□□ -2.32
RFX1	YLR176C	FLX1	P40464	311 aa		0.59	□□□□□ -2.32
RFX1	YLR176C	GCN20	P43535	752 aa	Known RBP	0.59	□□□□□ -2.32
RFX1	YLR176C	POR1	P04840	283 aa	Known RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	NSP1	P14907	823 aa	Known RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	RFA3	P26755	122 aa	Known RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	SOK1	P40317	901 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	YNL247W	P53852	767 aa	Known RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	PGA2	P53903	129 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	BNA7	Q04066	261 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	DGA1	Q08650	418 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	ODC2	Q99297	307 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	OCH1	P31755	480 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	PAN3	P36102	679 aa	Predicted RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	EDC3	P39998	551 aa	Known RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	RNH1	Q04740	348 aa		0.58	□□□□□ -2.32
RFX1	YLR176C	YPR174C	Q06616	221 aa	Predicted RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	YRA1	Q12159	226 aa	Known RBP	0.58	□□□□□ -2.32
RFX1	YLR176C	MDM35	O60200	86 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	YHR212W-A	P0CX91	67 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	YCR090C	P25654	182 aa	Known RBP	0.57	□□□□□ -2.32
RFX1	YLR176C	ERG10	P41338	398 aa	Known RBP	0.57	□□□□□ -2.32
RFX1	YLR176C	YFL065C	P43539	102 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	GET1	P53192	235 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	CWC27	Q02770	301 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	GGA1	Q06336	557 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	HTB1	P02293	131 aa	Known RBP	0.57	□□□□□ -2.32
RFX1	YLR176C	HTB2	P02294	131 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	HUA1	P40325	198 aa		0.57	□□□□□ -2.32
RFX1	YLR176C	HYR1	P40581	163 aa	Known RBP	0.57	□□□□□ -2.32
RFX1	YLR176C	YHL042W	P38729	150 aa		0.56	□□□□□ -2.32
RFX1	YLR176C	YEA4	P40004	342 aa		0.56	□□□□□ -2.32
RFX1	YLR176C	YMR007W	Q03675	126 aa		0.56	□□□□□ -2.32
RFX1	YLR176C	YMR099C	Q03161	297 aa	Known RBP	0.56	□□□□□ -2.32
RFX1	YLR176C	IRC23	Q08416	157 aa		0.56	□□□□□ -2.32
RFX1	YLR176C	MBF1	O14467	151 aa	Known RBP	0.55	□□□□□ -2.32
RFX1	YLR176C	CDC36	P06100	191 aa	Predicted RBP	0.55	□□□□□ -2.32
RFX1	YLR176C	CBF1	P17106	351 aa		0.55	□□□□□ -2.32
RFX1	YLR176C	CNB1	P25296	175 aa		0.55	□□□□□ -2.32
RFX1	YLR176C	YCL042W	P25572	119 aa		0.55	□□□□□ -2.32
RFX1	YLR176C	ECM4	P36156	370 aa		0.55	□□□□□ -2.32
RFX1	YLR176C	YHL018W	P38744	120 aa	Predicted RBP	0.55	□□□□□ -2.32
RFX1	YLR176C	SER2	P42941	309 aa		0.55	□□□□□ -2.32
RFX1	YLR176C	YFH7	P43591	353 aa		0.55	□□□□□ -2.32
RFX1	YLR176C	FUS2	Q05670	677 aa		0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 102.2 ms