RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C RIO2P40160 425 aaKnown RBP1.34□□□□□ -2.19
SMD3YLR147C YDR249CQ03787 373 aa1.34□□□□□ -2.19
SMD3YLR147C SEY1Q99287 776 aa1.34□□□□□ -2.19
SMD3YLR147C PDR15Q04182 1529 aaKnown RBP1.34□□□□□ -2.2
SMD3YLR147C YBR285WP38354 144 aa1.33□□□□□ -2.2
SMD3YLR147C YKL183C-AQ3E765 70 aa1.33□□□□□ -2.2
SMD3YLR147C DNF2Q12675 1612 aa1.33□□□□□ -2.2
SMD3YLR147C ESC1Q03661 1658 aaKnown RBP1.32□□□□□ -2.2
SMD3YLR147C YEL067CP39978 195 aa1.32□□□□□ -2.2
SMD3YLR147C PET191Q02772 108 aa1.32□□□□□ -2.2
SMD3YLR147C SSK2P53599 1579 aa1.32□□□□□ -2.2
SMD3YLR147C SKI3P17883 1432 aaKnown RBP1.32□□□□□ -2.2
SMD3YLR147C YPR117WQ06116 2489 aa1.31□□□□□ -2.2
SMD3YLR147C RPL28P02406 149 aaKnown RBP1.31□□□□□ -2.2
SMD3YLR147C SIR2P06700 562 aa1.31□□□□□ -2.2
SMD3YLR147C KSS1P14681 368 aa1.31□□□□□ -2.2
SMD3YLR147C MGA1P53050 456 aa1.31□□□□□ -2.2
SMD3YLR147C YDR274CP87283 123 aa1.31□□□□□ -2.2
SMD3YLR147C YHR214C-EQ8TGK0 99 aa1.31□□□□□ -2.2
SMD3YLR147C YFR032C-BQ8TGU2 87 aa1.31□□□□□ -2.2
SMD3YLR147C YIL177CP40434 1758 aa1.3□□□□□ -2.2
SMD3YLR147C YJL225CP40889 1758 aa1.3□□□□□ -2.2
SMD3YLR147C URA5P13298 226 aaKnown RBP1.3□□□□□ -2.2
SMD3YLR147C SEC11P15367 167 aa1.3□□□□□ -2.2
SMD3YLR147C ATP15P21306 62 aa1.3□□□□□ -2.2
SMD3YLR147C BET1P22804 142 aa1.3□□□□□ -2.2
SMD3YLR147C PPA2P28239 310 aa1.3□□□□□ -2.2
SMD3YLR147C OPY1P38271 328 aa1.3□□□□□ -2.2
SMD3YLR147C RPL37AP49166 88 aaKnown RBP1.3□□□□□ -2.2
SMD3YLR147C RPL27AP0C2H6 136 aaKnown RBP1.29□□□□□ -2.2
SMD3YLR147C YBR121C-AP0C5L4 52 aa1.29□□□□□ -2.2
SMD3YLR147C GCN3P14741 305 aa1.29□□□□□ -2.2
SMD3YLR147C RPB3P16370 318 aaKnown RBP1.29□□□□□ -2.2
SMD3YLR147C PRX1P34227 261 aaKnown RBP1.29□□□□□ -2.2
SMD3YLR147C RMD6P39975 231 aa1.29□□□□□ -2.2
SMD3YLR147C OTU1P43558 301 aa1.29□□□□□ -2.2
SMD3YLR147C RAD28Q12021 506 aa1.29□□□□□ -2.2
SMD3YLR147C CHD1P32657 1468 aa1.29□□□□□ -2.2
SMD3YLR147C YPK9Q12697 1472 aa1.29□□□□□ -2.2
SMD3YLR147C RKR1Q04781 1562 aa1.29□□□□□ -2.2
SMD3YLR147C TOM1Q03280 3268 aa1.28□□□□□ -2.2
SMD3YLR147C CUP1-1P0CX80 61 aa1.28□□□□□ -2.2
SMD3YLR147C CUP1-2P0CX81 61 aa1.28□□□□□ -2.2
SMD3YLR147C PBN1P25580 416 aa1.28□□□□□ -2.2
SMD3YLR147C ERG28P40030 148 aa1.28□□□□□ -2.2
SMD3YLR147C FLX1P40464 311 aa1.28□□□□□ -2.2
SMD3YLR147C ADO1P47143 340 aaKnown RBP1.28□□□□□ -2.2
SMD3YLR147C PDR17P53844 350 aa1.28□□□□□ -2.2
SMD3YLR147C CUE4Q04201 117 aaPredicted RBP1.28□□□□□ -2.2
SMD3YLR147C YNG1Q08465 219 aa1.28□□□□□ -2.2
SMD3YLR147C NTE1Q04958 1679 aa1.28□□□□□ -2.2
SMD3YLR147C VPS15P22219 1454 aa1.27□□□□□ -2.21
SMD3YLR147C UFD4P33202 1483 aa1.27□□□□□ -2.21
SMD3YLR147C PTM1P32857 523 aa1.27□□□□□ -2.21
SMD3YLR147C AST2P39945 430 aaKnown RBP1.27□□□□□ -2.21
SMD3YLR147C RTR1P40084 226 aaPredicted RBP1.27□□□□□ -2.21
SMD3YLR147C YAE1P47118 141 aaPredicted RBP1.27□□□□□ -2.21
SMD3YLR147C JLP1Q12358 412 aa1.27□□□□□ -2.21
SMD3YLR147C KDX1P36005 433 aa1.26□□□□□ -2.21
SMD3YLR147C YER034WP40022 185 aaKnown RBP1.26□□□□□ -2.21
SMD3YLR147C YFL065CP43539 102 aa1.26□□□□□ -2.21
SMD3YLR147C COG5P53951 403 aa1.26□□□□□ -2.21
SMD3YLR147C SLH1P53327 1967 aaKnown RBP1.25□□□□□ -2.21
SMD3YLR147C TOR1P35169 2470 aa1.25□□□□□ -2.21
SMD3YLR147C YDR157WA0A023PZE8 133 aa1.25□□□□□ -2.21
SMD3YLR147C NSP1P14907 823 aaKnown RBP1.25□□□□□ -2.21
SMD3YLR147C MGM101P32787 269 aaKnown RBP1.25□□□□□ -2.21
SMD3YLR147C BMH2P34730 273 aaKnown RBP1.25□□□□□ -2.21
SMD3YLR147C YNL194CP40169 301 aa1.25□□□□□ -2.21
SMD3YLR147C YRB1P41920 201 aaKnown RBP1.25□□□□□ -2.21
SMD3YLR147C IRC18P47056 224 aa1.25□□□□□ -2.21
SMD3YLR147C LSM7P53905 115 aaKnown RBP1.25□□□□□ -2.21
SMD3YLR147C SCC2Q04002 1493 aa1.24□□□□□ -2.21
SMD3YLR147C TRM732Q03496 1420 aa1.24□□□□□ -2.21
SMD3YLR147C NHP6BP11633 99 aaKnown RBP1.24□□□□□ -2.21
SMD3YLR147C CBT1P36038 271 aaPredicted RBP1.24□□□□□ -2.21
SMD3YLR147C ARO8P53090 500 aaKnown RBP1.24□□□□□ -2.21
SMD3YLR147C MPC3P53311 146 aa1.24□□□□□ -2.21
SMD3YLR147C YNL247WP53852 767 aaKnown RBP1.24□□□□□ -2.21
SMD3YLR147C PDR10P51533 1564 aa1.23□□□□□ -2.21
SMD3YLR147C ATG2P53855 1592 aa1.23□□□□□ -2.21
SMD3YLR147C YHL042WP38729 150 aa1.23□□□□□ -2.21
SMD3YLR147C YAP3P38749 330 aa1.23□□□□□ -2.21
SMD3YLR147C EDC3P39998 551 aaKnown RBP1.23□□□□□ -2.21
SMD3YLR147C RAD17P48581 401 aa1.23□□□□□ -2.21
SMD3YLR147C RCE1Q03530 315 aa1.23□□□□□ -2.21
SMD3YLR147C YHR007C-AQ07074 71 aa1.23□□□□□ -2.21
SMD3YLR147C YOL160WQ08321 113 aa1.23□□□□□ -2.21
SMD3YLR147C NCB2Q92317 146 aa1.23□□□□□ -2.21
SMD3YLR147C NUP159P40477 1460 aa1.23□□□□□ -2.21
SMD3YLR147C XRN1P22147 1528 aaKnown RBP1.22□□□□□ -2.21
SMD3YLR147C MAG1P22134 296 aaKnown RBP1.22□□□□□ -2.21
SMD3YLR147C SOK1P40317 901 aa1.22□□□□□ -2.21
SMD3YLR147C CWC23P52868 283 aaPredicted RBP1.22□□□□□ -2.21
SMD3YLR147C CWC27Q02770 301 aa1.22□□□□□ -2.21
SMD3YLR147C SPP41P38904 1435 aa1.22□□□□□ -2.21
SMD3YLR147C FAS1P07149 2051 aaKnown RBP1.21□□□□□ -2.22
SMD3YLR147C CDC33P07260 213 aaKnown RBP1.21□□□□□ -2.22
SMD3YLR147C SPO13P23624 291 aa1.21□□□□□ -2.22
SMD3YLR147C ACC1Q00955 2233 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms