RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W GCY1P14065 312 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SPC42YKL042W CKS1P20486 150 aaKnown RBP3.34□□□□□ -1.87
SPC42YKL042W CNB1P25296 175 aa3.34□□□□□ -1.87
SPC42YKL042W UBC12P52491 188 aa3.34□□□□□ -1.87
SPC42YKL042W RGM1Q00453 211 aa3.34□□□□□ -1.87
SPC42YKL042W MRPS8Q03799 155 aa3.34□□□□□ -1.87
SPC42YKL042W GIM5Q04493 163 aa3.34□□□□□ -1.87
SPC42YKL042W CMC2Q3E7A4 109 aa3.34□□□□□ -1.87
SPC42YKL042W SNF4P12904 322 aa3.33□□□□□ -1.88
SPC42YKL042W TRX3P25372 127 aa3.33□□□□□ -1.88
SPC42YKL042W PEX4P29340 183 aa3.33□□□□□ -1.88
SPC42YKL042W HNT1Q04344 158 aaKnown RBP3.33□□□□□ -1.88
SPC42YKL042W RIO1Q12196 484 aaKnown RBP3.33□□□□□ -1.88
SPC42YKL042W RPL35AP0CX84 120 aaKnown RBP3.32□□□□□ -1.88
SPC42YKL042W RPL35BP0CX85 120 aaKnown RBP3.32□□□□□ -1.88
SPC42YKL042W ERV15P38312 142 aa3.32□□□□□ -1.88
SPC42YKL042W RPL33BP41056 107 aaKnown RBP3.32□□□□□ -1.88
SPC42YKL042W CGI121Q03705 181 aaKnown RBP3.32□□□□□ -1.88
SPC42YKL042W YDL085C-AQ3E7B7 68 aaKnown RBP3.32□□□□□ -1.88
SPC42YKL042W PET9P18239 318 aaKnown RBP3.31□□□□□ -1.88
SPC42YKL042W ATP15P21306 62 aa3.31□□□□□ -1.88
SPC42YKL042W TRR1P29509 319 aaKnown RBP3.31□□□□□ -1.88
SPC42YKL042W GVP36P40531 326 aaKnown RBP3.31□□□□□ -1.88
SPC42YKL042W ARP3P47117 449 aaKnown RBP3.31□□□□□ -1.88
SPC42YKL042W YIP3P53633 176 aa3.31□□□□□ -1.88
SPC42YKL042W DAD3P69850 94 aa3.31□□□□□ -1.88
SPC42YKL042W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SPC42YKL042W VPS51P36116 164 aa3.3□□□□□ -1.88
SPC42YKL042W PHO88P38264 188 aaPredicted RBP3.3□□□□□ -1.88
SPC42YKL042W UMP1P38293 148 aa3.3□□□□□ -1.88
SPC42YKL042W SRP14P38985 146 aa3.3□□□□□ -1.88
SPC42YKL042W ICE2P40499 491 aa3.3□□□□□ -1.88
SPC42YKL042W YKE4P40544 346 aa3.3□□□□□ -1.88
SPC42YKL042W YNR062CP53748 327 aa3.3□□□□□ -1.88
SPC42YKL042W SNC2P33328 115 aa3.29□□□□□ -1.88
SPC42YKL042W ECM4P36156 370 aa3.29□□□□□ -1.88
SPC42YKL042W DOC1P53068 250 aa3.29□□□□□ -1.88
SPC42YKL042W ARO8P53090 500 aaKnown RBP3.29□□□□□ -1.88
SPC42YKL042W YDR274CP87283 123 aa3.29□□□□□ -1.88
SPC42YKL042W SCL1P21243 252 aaKnown RBP3.28□□□□□ -1.88
SPC42YKL042W AIM2P39721 246 aa3.28□□□□□ -1.88
SPC42YKL042W DAN1P47178 298 aa3.28□□□□□ -1.88
SPC42YKL042W YLR460CP54007 376 aa3.28□□□□□ -1.88
SPC42YKL042W RAD51P25454 400 aa3.27□□□□□ -1.89
SPC42YKL042W YCR090CP25654 182 aaKnown RBP3.27□□□□□ -1.89
SPC42YKL042W OCH1P31755 480 aa3.27□□□□□ -1.89
SPC42YKL042W RME1P32338 300 aaKnown RBP3.27□□□□□ -1.89
SPC42YKL042W YET1P35723 206 aa3.27□□□□□ -1.89
SPC42YKL042W SKI6P46948 246 aaPredicted RBP3.27□□□□□ -1.89
SPC42YKL042W EAF6P47128 113 aa3.27□□□□□ -1.89
SPC42YKL042W YLR031WQ07978 186 aa3.27□□□□□ -1.89
SPC42YKL042W BRX1Q08235 291 aaKnown RBP3.27□□□□□ -1.89
SPC42YKL042W DGA1Q08650 418 aa3.27□□□□□ -1.89
SPC42YKL042W YOR283WQ12040 230 aaKnown RBP3.27□□□□□ -1.89
SPC42YKL042W YKR041WP36134 250 aa3.26□□□□□ -1.89
SPC42YKL042W TIR3P40552 269 aa3.26□□□□□ -1.89
SPC42YKL042W QCR6P00127 147 aa3.25□□□□□ -1.89
SPC42YKL042W OPY1P38271 328 aa3.25□□□□□ -1.89
SPC42YKL042W YBR285WP38354 144 aa3.25□□□□□ -1.89
SPC42YKL042W YJL027CP47063 138 aaPredicted RBP3.25□□□□□ -1.89
SPC42YKL042W YJR111CP47148 283 aaKnown RBP3.25□□□□□ -1.89
SPC42YKL042W ERG25P53045 309 aa3.25□□□□□ -1.89
SPC42YKL042W AIM34Q03673 198 aa3.25□□□□□ -1.89
SPC42YKL042W RPS24AP0CX31 135 aaKnown RBP3.24□□□□□ -1.89
SPC42YKL042W RPS24BP0CX32 135 aaKnown RBP3.24□□□□□ -1.89
SPC42YKL042W MGT1P26188 188 aa3.24□□□□□ -1.89
SPC42YKL042W SER2P42941 309 aa3.24□□□□□ -1.89
SPC42YKL042W FMP32P43557 207 aa3.24□□□□□ -1.89
SPC42YKL042W BOL2P53082 120 aa3.24□□□□□ -1.89
SPC42YKL042W JAC1P53193 184 aa3.24□□□□□ -1.89
SPC42YKL042W YMR315WQ04869 349 aaKnown RBP3.24□□□□□ -1.89
SPC42YKL042W FSF1Q12029 327 aaKnown RBP3.24□□□□□ -1.89
SPC42YKL042W RAS2P01120 322 aaKnown RBP3.23□□□□□ -1.89
SPC42YKL042W CLG1P35190 452 aa3.23□□□□□ -1.89
SPC42YKL042W YHR022CP38763 256 aa3.23□□□□□ -1.89
SPC42YKL042W YER076CP40049 302 aa3.23□□□□□ -1.89
SPC42YKL042W YNR077CP53758 84 aa3.23□□□□□ -1.89
SPC42YKL042W YNL247WP53852 767 aaKnown RBP3.23□□□□□ -1.89
SPC42YKL042W CYT2Q00873 224 aa3.23□□□□□ -1.89
SPC42YKL042W ODC2Q99297 307 aa3.23□□□□□ -1.89
SPC42YKL042W PAN3P36102 679 aaPredicted RBP3.22□□□□□ -1.89
SPC42YKL042W MAK5P38112 773 aaPredicted RBP3.22□□□□□ -1.89
SPC42YKL042W FMP23P38231 175 aa3.22□□□□□ -1.89
SPC42YKL042W SVP26P38869 228 aa3.22□□□□□ -1.89
SPC42YKL042W NVJ1P38881 321 aa3.22□□□□□ -1.89
SPC42YKL042W YEA4P40004 342 aa3.22□□□□□ -1.89
SPC42YKL042W LSM4P40070 187 aaKnown RBP3.22□□□□□ -1.89
SPC42YKL042W YNL217WP40152 326 aa3.22□□□□□ -1.89
SPC42YKL042W TMA22P47089 198 aaPredicted RBP3.22□□□□□ -1.89
SPC42YKL042W YNL140CP53910 189 aa3.22□□□□□ -1.89
SPC42YKL042W SHH4Q06236 168 aa3.22□□□□□ -1.89
SPC42YKL042W AHC2P25649 128 aa3.21□□□□□ -1.9
SPC42YKL042W NUP49Q02199 472 aa3.21□□□□□ -1.9
SPC42YKL042W DYN3Q04949 312 aa3.21□□□□□ -1.9
SPC42YKL042W YOL014WQ08110 124 aa3.21□□□□□ -1.9
SPC42YKL042W YPR014CQ6B0W2 109 aa3.21□□□□□ -1.9
SPC42YKL042W PDR18P53756 1333 aa3.2□□□□□ -1.9
SPC42YKL042W CPA1P07258 411 aaKnown RBP3.2□□□□□ -1.9
SPC42YKL042W SEC14P24280 304 aaKnown RBP3.2□□□□□ -1.9
SPC42YKL042W ARC19P33204 171 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms