RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	RPB3	P16370	318 aa	Known RBP	3.02	□□□□□ -1.93
CSM2	YIL132C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
CSM2	YIL132C	COG5	P53951	403 aa		3.02	□□□□□ -1.93
CSM2	YIL132C	RPL25	P04456	142 aa	Known RBP	3.01	□□□□□ -1.93
CSM2	YIL132C	CPA1	P07258	411 aa	Known RBP	3.01	□□□□□ -1.93
CSM2	YIL132C	KNH1	P50112	268 aa		3.01	□□□□□ -1.93
CSM2	YIL132C	YDR274C	P87283	123 aa		3.01	□□□□□ -1.93
CSM2	YIL132C	GIS3	Q12418	502 aa		3.01	□□□□□ -1.93
CSM2	YIL132C	SPS18	P32572	300 aa		3	□□□□□ -1.93
CSM2	YIL132C	TRM5	P38793	499 aa		3	□□□□□ -1.93
CSM2	YIL132C	CUS2	P53830	285 aa	Predicted RBP	3	□□□□□ -1.93
CSM2	YIL132C	CYR1	P08678	2026 aa	Known RBP	2.99	□□□□□ -1.93
CSM2	YIL132C	MER1	P16523	270 aa		2.99	□□□□□ -1.93
CSM2	YIL132C	MAG1	P22134	296 aa	Known RBP	2.99	□□□□□ -1.93
CSM2	YIL132C	TAF14	P35189	244 aa		2.99	□□□□□ -1.93
CSM2	YIL132C	BNA7	Q04066	261 aa		2.99	□□□□□ -1.93
CSM2	YIL132C	YNG1	Q08465	219 aa		2.99	□□□□□ -1.93
CSM2	YIL132C	YLR236C	A0A023PZG4	107 aa		2.98	□□□□□ -1.93
CSM2	YIL132C	ATP15	P21306	62 aa		2.98	□□□□□ -1.93
CSM2	YIL132C	YCR087C-A	P37263	153 aa		2.98	□□□□□ -1.93
CSM2	YIL132C	IKI1	P38874	309 aa		2.98	□□□□□ -1.93
CSM2	YIL132C	MDM32	Q12171	622 aa		2.98	□□□□□ -1.93
CSM2	YIL132C	SIR2	P06700	562 aa		2.97	□□□□□ -1.93
CSM2	YIL132C	TIM11	P81449	96 aa	Predicted RBP	2.97	□□□□□ -1.93
CSM2	YIL132C	YDL180W	Q12301	547 aa		2.97	□□□□□ -1.93
CSM2	YIL132C	YIL177C	P40434	1758 aa		2.97	□□□□□ -1.93
CSM2	YIL132C	YJL225C	P40889	1758 aa		2.97	□□□□□ -1.93
CSM2	YIL132C	YOL160W	Q08321	113 aa		2.95	□□□□□ -1.94
CSM2	YIL132C	CKS1	P20486	150 aa	Known RBP	2.94	□□□□□ -1.94
CSM2	YIL132C	TVP38	P36164	337 aa		2.94	□□□□□ -1.94
CSM2	YIL132C	HMF1	P40037	129 aa	Known RBP	2.94	□□□□□ -1.94
CSM2	YIL132C	MPA43	P53583	542 aa	Predicted RBP	2.94	□□□□□ -1.94
CSM2	YIL132C	RPL27A	P0C2H6	136 aa	Known RBP	2.93	□□□□□ -1.94
CSM2	YIL132C	RFA3	P26755	122 aa	Known RBP	2.92	□□□□□ -1.94
CSM2	YIL132C	YER076C	P40049	302 aa		2.92	□□□□□ -1.94
CSM2	YIL132C	CUE4	Q04201	117 aa	Predicted RBP	2.92	□□□□□ -1.94
CSM2	YIL132C	SEC11	P15367	167 aa		2.9	□□□□□ -1.95
CSM2	YIL132C	RAD28	Q12021	506 aa		2.9	□□□□□ -1.95
CSM2	YIL132C	CDC36	P06100	191 aa	Predicted RBP	2.89	□□□□□ -1.95
CSM2	YIL132C	RPB4	P20433	221 aa	Predicted RBP	2.89	□□□□□ -1.95
CSM2	YIL132C	KDX1	P36005	433 aa		2.89	□□□□□ -1.95
CSM2	YIL132C	VMA22	P38784	181 aa		2.89	□□□□□ -1.95
CSM2	YIL132C	AIM25	P47140	327 aa		2.89	□□□□□ -1.95
CSM2	YIL132C	UBC7	Q02159	165 aa		2.89	□□□□□ -1.95
CSM2	YIL132C	HNT1	Q04344	158 aa	Known RBP	2.89	□□□□□ -1.95
CSM2	YIL132C	MSB2	P32334	1306 aa		2.89	□□□□□ -1.95
CSM2	YIL132C	IKI3	Q06706	1349 aa	Known RBP	2.89	□□□□□ -1.95
CSM2	YIL132C	HTB1	P02293	131 aa	Known RBP	2.88	□□□□□ -1.95
CSM2	YIL132C	HTB2	P02294	131 aa		2.88	□□□□□ -1.95
CSM2	YIL132C	NTG1	P31378	399 aa		2.88	□□□□□ -1.95
CSM2	YIL132C	OPY1	P38271	328 aa		2.88	□□□□□ -1.95
CSM2	YIL132C	GGA1	Q06336	557 aa		2.88	□□□□□ -1.95
CSM2	YIL132C	ERG10	P41338	398 aa	Known RBP	2.87	□□□□□ -1.95
CSM2	YIL132C	YRA1	Q12159	226 aa	Known RBP	2.86	□□□□□ -1.95
CSM2	YIL132C	YNL146C-A	Q3E7Z1	64 aa		2.86	□□□□□ -1.95
CSM2	YIL132C	YMR226C	Q05016	267 aa	Known RBP	2.85	□□□□□ -1.95
CSM2	YIL132C	ODC2	Q99297	307 aa		2.85	□□□□□ -1.95
CSM2	YIL132C	YER034W	P40022	185 aa	Known RBP	2.84	□□□□□ -1.95
CSM2	YIL132C	RIO2	P40160	425 aa	Known RBP	2.84	□□□□□ -1.95
CSM2	YIL132C	MPC3	P53311	146 aa		2.84	□□□□□ -1.95
CSM2	YIL132C	OCH1	P31755	480 aa		2.83	□□□□□ -1.96
CSM2	YIL132C	SPO13	P23624	291 aa		2.82	□□□□□ -1.96
CSM2	YIL132C	POR1	P04840	283 aa	Known RBP	2.81	□□□□□ -1.96
CSM2	YIL132C	CBF1	P17106	351 aa		2.81	□□□□□ -1.96
CSM2	YIL132C	CNB1	P25296	175 aa		2.81	□□□□□ -1.96
CSM2	YIL132C	YCR090C	P25654	182 aa	Known RBP	2.81	□□□□□ -1.96
CSM2	YIL132C	YKT6	P36015	200 aa	Known RBP	2.81	□□□□□ -1.96
CSM2	YIL132C	YHR007C-A	Q07074	71 aa		2.81	□□□□□ -1.96
CSM2	YIL132C	VAR1	P02381	398 aa		2.8	□□□□□ -1.96
CSM2	YIL132C	RFC4	P40339	323 aa	Known RBP	2.8	□□□□□ -1.96
CSM2	YIL132C	YCL012C	Q8J0M4	134 aa		2.8	□□□□□ -1.96
CSM2	YIL132C	PAN3	P36102	679 aa	Predicted RBP	2.79	□□□□□ -1.96
CSM2	YIL132C	TVP23	P38962	199 aa		2.79	□□□□□ -1.96
CSM2	YIL132C	DGA1	Q08650	418 aa		2.79	□□□□□ -1.96
CSM2	YIL132C	FLX1	P40464	311 aa		2.78	□□□□□ -1.96
CSM2	YIL132C	GET1	P53192	235 aa		2.78	□□□□□ -1.96
CSM2	YIL132C	MRPS17	Q03246	237 aa	Predicted RBP	2.78	□□□□□ -1.96
CSM2	YIL132C	FUS2	Q05670	677 aa		2.78	□□□□□ -1.96
CSM2	YIL132C	MATALPHA2	P0CY08	210 aa		2.77	□□□□□ -1.97
CSM2	YIL132C	HMLALPHA2	P0CY09	210 aa		2.77	□□□□□ -1.97
CSM2	YIL132C	YEA4	P40004	342 aa		2.77	□□□□□ -1.97
CSM2	YIL132C	MBF1	O14467	151 aa	Known RBP	2.76	□□□□□ -1.97
CSM2	YIL132C	ASF2	P32448	525 aa	Predicted RBP	2.76	□□□□□ -1.97
CSM2	YIL132C	YPL073C	P40323	161 aa		2.76	□□□□□ -1.97
CSM2	YIL132C	RCE1	Q03530	315 aa		2.76	□□□□□ -1.97
CSM2	YIL132C	MRS1	P07266	363 aa		2.75	□□□□□ -1.97
CSM2	YIL132C	AIM2	P39721	246 aa		2.75	□□□□□ -1.97
CSM2	YIL132C	YAE1	P47118	141 aa	Predicted RBP	2.75	□□□□□ -1.97
CSM2	YIL132C	ARO8	P53090	500 aa	Known RBP	2.75	□□□□□ -1.97
CSM2	YIL132C	MMS2	P53152	137 aa		2.75	□□□□□ -1.97
CSM2	YIL132C	YPR174C	Q06616	221 aa	Predicted RBP	2.75	□□□□□ -1.97
CSM2	YIL132C	SKI6	P46948	246 aa	Predicted RBP	2.74	□□□□□ -1.97
CSM2	YIL132C	ABP140	Q08641	628 aa	Known RBP	2.74	□□□□□ -1.97
CSM2	YIL132C	ECM4	P36156	370 aa		2.73	□□□□□ -1.97
CSM2	YIL132C	SER2	P42941	309 aa		2.73	□□□□□ -1.97
CSM2	YIL132C	DYN3	Q04949	312 aa		2.73	□□□□□ -1.97
CSM2	YIL132C	MDM35	O60200	86 aa		2.72	□□□□□ -1.97
CSM2	YIL132C	EDC3	P39998	551 aa	Known RBP	2.72	□□□□□ -1.97
CSM2	YIL132C	ARP3	P47117	449 aa	Known RBP	2.72	□□□□□ -1.97
CSM2	YIL132C	NOP19	P53317	196 aa	Predicted RBP	2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms