RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C Q0144Q9ZZW2 109 aa2.88□□□□□ -1.95
NEM1YHR004C UBI4P0CG63 381 aaKnown RBP2.87□□□□□ -1.95
NEM1YHR004C CKS1P20486 150 aaKnown RBP2.87□□□□□ -1.95
NEM1YHR004C MRPS28P21771 286 aa2.87□□□□□ -1.95
NEM1YHR004C SPO13P23624 291 aa2.87□□□□□ -1.95
NEM1YHR004C GPI18P38211 433 aa2.87□□□□□ -1.95
NEM1YHR004C TRM7P38238 310 aaKnown RBP2.87□□□□□ -1.95
NEM1YHR004C SLM6P38343 150 aa2.87□□□□□ -1.95
NEM1YHR004C RPF1P38805 295 aaKnown RBP2.87□□□□□ -1.95
NEM1YHR004C RFC2P40348 353 aa2.87□□□□□ -1.95
NEM1YHR004C FIS1P40515 155 aa2.87□□□□□ -1.95
NEM1YHR004C YJL028WP47062 111 aa2.87□□□□□ -1.95
NEM1YHR004C YJR015WP47090 510 aa2.87□□□□□ -1.95
NEM1YHR004C YGL088WP53151 121 aa2.87□□□□□ -1.95
NEM1YHR004C YMR244WQ04018 355 aa2.87□□□□□ -1.95
NEM1YHR004C NKP2Q06162 153 aa2.87□□□□□ -1.95
NEM1YHR004C YPR202WQ08993 238 aa2.87□□□□□ -1.95
NEM1YHR004C WIP1Q2V2P8 89 aa2.87□□□□□ -1.95
NEM1YHR004C ISD11Q6Q560 94 aa2.87□□□□□ -1.95
NEM1YHR004C RNP1P32385 249 aa2.86□□□□□ -1.95
NEM1YHR004C SFC1P33303 322 aa2.86□□□□□ -1.95
NEM1YHR004C COS8P38723 381 aa2.86□□□□□ -1.95
NEM1YHR004C AVT2P39981 480 aa2.86□□□□□ -1.95
NEM1YHR004C DLS1P40366 167 aa2.86□□□□□ -1.95
NEM1YHR004C YJR111CP47148 283 aaKnown RBP2.86□□□□□ -1.95
NEM1YHR004C TDA4P47153 279 aa2.86□□□□□ -1.95
NEM1YHR004C LSM3P57743 89 aaKnown RBP2.86□□□□□ -1.95
NEM1YHR004C YDR366CP87287 132 aa2.86□□□□□ -1.95
NEM1YHR004C TRM12Q04235 462 aa2.86□□□□□ -1.95
NEM1YHR004C ATG5Q12380 294 aa2.86□□□□□ -1.95
NEM1YHR004C TSC3Q3E790 80 aa2.86□□□□□ -1.95
NEM1YHR004C URA5P13298 226 aaKnown RBP2.85□□□□□ -1.95
NEM1YHR004C SCL1P21243 252 aaKnown RBP2.85□□□□□ -1.95
NEM1YHR004C BET1P22804 142 aa2.85□□□□□ -1.95
NEM1YHR004C MRPL24P36525 258 aaPredicted RBP2.85□□□□□ -1.95
NEM1YHR004C POP4P38336 279 aa2.85□□□□□ -1.95
NEM1YHR004C YGP1P38616 354 aaKnown RBP2.85□□□□□ -1.95
NEM1YHR004C YAR068WP39564 161 aa2.85□□□□□ -1.95
NEM1YHR004C IRC22P40006 225 aa2.85□□□□□ -1.95
NEM1YHR004C ARP3P47117 449 aaKnown RBP2.85□□□□□ -1.95
NEM1YHR004C HHO1P53551 258 aa2.85□□□□□ -1.95
NEM1YHR004C GAS3Q03655 524 aa2.85□□□□□ -1.95
NEM1YHR004C FRQ1Q06389 190 aa2.85□□□□□ -1.95
NEM1YHR004C NIP7Q08962 181 aaKnown RBP2.85□□□□□ -1.95
NEM1YHR004C YPL162CQ12042 273 aa2.85□□□□□ -1.95
NEM1YHR004C YDL180WQ12301 547 aa2.85□□□□□ -1.95
NEM1YHR004C PDR18P53756 1333 aa2.84□□□□□ -1.95
NEM1YHR004C YPR170W-BP0C5R9 85 aa2.84□□□□□ -1.96
NEM1YHR004C DSF1P0CX08 502 aa2.84□□□□□ -1.96
NEM1YHR004C YNR073CP0CX09 502 aa2.84□□□□□ -1.96
NEM1YHR004C RPL2AP0CX45 254 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C RPL2BP0CX46 254 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C PET9P18239 318 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C CCA1P21269 546 aa2.84□□□□□ -1.96
NEM1YHR004C STP22P25604 385 aa2.84□□□□□ -1.96
NEM1YHR004C RPS1AP33442 255 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C ECM34P38728 170 aa2.84□□□□□ -1.96
NEM1YHR004C OST2P46964 130 aa2.84□□□□□ -1.96
NEM1YHR004C APS3P47064 194 aa2.84□□□□□ -1.96
NEM1YHR004C CAX4P53223 239 aa2.84□□□□□ -1.96
NEM1YHR004C YGR039WP53225 103 aa2.84□□□□□ -1.96
NEM1YHR004C ARL3Q02804 198 aa2.84□□□□□ -1.96
NEM1YHR004C COF1Q03048 143 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C YPL039WQ03080 316 aa2.84□□□□□ -1.96
NEM1YHR004C YDR249CQ03787 373 aa2.84□□□□□ -1.96
NEM1YHR004C EMI1Q04406 187 aa2.84□□□□□ -1.96
NEM1YHR004C MRX8Q05473 314 aa2.84□□□□□ -1.96
NEM1YHR004C YLR179CQ06252 201 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C YOL029CQ08187 201 aa2.84□□□□□ -1.96
NEM1YHR004C YOR342CQ12182 319 aa2.84□□□□□ -1.96
NEM1YHR004C TIM22Q12328 207 aa2.84□□□□□ -1.96
NEM1YHR004C RPO41P13433 1351 aaKnown RBP2.84□□□□□ -1.96
NEM1YHR004C YHR139C-AO13536 103 aa2.83□□□□□ -1.96
NEM1YHR004C RPB3P16370 318 aaKnown RBP2.83□□□□□ -1.96
NEM1YHR004C HSP30P25619 332 aa2.83□□□□□ -1.96
NEM1YHR004C SEC17P32602 292 aa2.83□□□□□ -1.96
NEM1YHR004C RCN1P36054 211 aa2.83□□□□□ -1.96
NEM1YHR004C MSA2P36157 363 aa2.83□□□□□ -1.96
NEM1YHR004C YBR285WP38354 144 aa2.83□□□□□ -1.96
NEM1YHR004C VMA7P39111 118 aa2.83□□□□□ -1.96
NEM1YHR004C SKI6P46948 246 aaPredicted RBP2.83□□□□□ -1.96
NEM1YHR004C ACT1P60010 375 aaKnown RBP2.83□□□□□ -1.96
NEM1YHR004C CNL1Q06333 122 aa2.83□□□□□ -1.96
NEM1YHR004C PRP11Q07350 266 aaPredicted RBP2.83□□□□□ -1.96
NEM1YHR004C YOR376WQ08900 122 aa2.83□□□□□ -1.96
NEM1YHR004C YDL211CQ12121 372 aa2.83□□□□□ -1.96
NEM1YHR004C DFM1Q12743 341 aaKnown RBP2.83□□□□□ -1.96
NEM1YHR004C YFR032C-BQ8TGU2 87 aa2.83□□□□□ -1.96
NEM1YHR004C RIB3Q99258 208 aa2.83□□□□□ -1.96
NEM1YHR004C NUP157P40064 1391 aaKnown RBP2.83□□□□□ -1.96
NEM1YHR004C KIN28P06242 306 aa2.82□□□□□ -1.96
NEM1YHR004C SHE2P36068 246 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
NEM1YHR004C NSG1P38837 291 aa2.82□□□□□ -1.96
NEM1YHR004C RRT13P40042 185 aa2.82□□□□□ -1.96
NEM1YHR004C YPL073CP40323 161 aa2.82□□□□□ -1.96
NEM1YHR004C YFR054CP43622 192 aa2.82□□□□□ -1.96
NEM1YHR004C GPI14P47088 403 aaKnown RBP2.82□□□□□ -1.96
NEM1YHR004C TTI2P47168 421 aa2.82□□□□□ -1.96
NEM1YHR004C APS2Q00381 147 aa2.82□□□□□ -1.96
NEM1YHR004C ECM19Q06011 112 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms