RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeast

Gene RRT1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT1	YBL048W	ATP15	P21306	62 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	MAG1	P22134	296 aa	Known RBP	0.62	□□□□□ -2.31
RRT1	YBL048W	TFC1	P32367	649 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	YBR285W	P38354	144 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	IRC18	P47056	224 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	KNH1	P50112	268 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	PGA2	P53903	129 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	LSM7	P53905	115 aa	Known RBP	0.62	□□□□□ -2.31
RRT1	YBL048W	YDR274C	P87283	123 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	BNA7	Q04066	261 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	RIO1	Q12196	484 aa	Known RBP	0.62	□□□□□ -2.31
RRT1	YBL048W	ATG40	Q99325	256 aa		0.62	□□□□□ -2.31
RRT1	YBL048W	YLR236C	A0A023PZG4	107 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	TAF14	P35189	244 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	YCR087C-A	P37263	153 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	YBR209W	P38311	105 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	TRM5	P38793	499 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	IKI1	P38874	309 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	MPA43	P53583	542 aa	Predicted RBP	0.61	□□□□□ -2.31
RRT1	YBL048W	POP3	P53833	195 aa	Predicted RBP	0.61	□□□□□ -2.31
RRT1	YBL048W	COG5	P53951	403 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	TIM11	P81449	96 aa	Predicted RBP	0.61	□□□□□ -2.31
RRT1	YBL048W	YOL160W	Q08321	113 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	YNG1	Q08465	219 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	MDM32	Q12171	622 aa		0.61	□□□□□ -2.31
RRT1	YBL048W	IKI3	Q06706	1349 aa	Known RBP	0.61	□□□□□ -2.31
RRT1	YBL048W	HTB1	P02293	131 aa	Known RBP	0.6	□□□□□ -2.31
RRT1	YBL048W	HTB2	P02294	131 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	SIR2	P06700	562 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	CKS1	P20486	150 aa	Known RBP	0.6	□□□□□ -2.31
RRT1	YBL048W	RFA3	P26755	122 aa	Known RBP	0.6	□□□□□ -2.31
RRT1	YBL048W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
RRT1	YBL048W	TVP38	P36164	337 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	HMF1	P40037	129 aa	Known RBP	0.6	□□□□□ -2.31
RRT1	YBL048W	YER076C	P40049	302 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	AIM25	P47140	327 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	CUS2	P53830	285 aa	Predicted RBP	0.6	□□□□□ -2.31
RRT1	YBL048W	CUE4	Q04201	117 aa	Predicted RBP	0.6	□□□□□ -2.31
RRT1	YBL048W	YDL180W	Q12301	547 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	MSB2	P32334	1306 aa		0.6	□□□□□ -2.31
RRT1	YBL048W	CDC36	P06100	191 aa	Predicted RBP	0.59	□□□□□ -2.31
RRT1	YBL048W	RPL27A	P0C2H6	136 aa	Known RBP	0.59	□□□□□ -2.31
RRT1	YBL048W	SEC11	P15367	167 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	RPB4	P20433	221 aa	Predicted RBP	0.59	□□□□□ -2.31
RRT1	YBL048W	NTG1	P31378	399 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	KDX1	P36005	433 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	OPY1	P38271	328 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	VMA22	P38784	181 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	UBC7	Q02159	165 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	HNT1	Q04344	158 aa	Known RBP	0.59	□□□□□ -2.31
RRT1	YBL048W	RAD28	Q12021	506 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	YRA1	Q12159	226 aa	Known RBP	0.59	□□□□□ -2.31
RRT1	YBL048W	YNL146C-A	Q3E7Z1	64 aa		0.59	□□□□□ -2.31
RRT1	YBL048W	FAS1	P07149	2051 aa	Known RBP	0.58	□□□□□ -2.32
RRT1	YBL048W	POR1	P04840	283 aa	Known RBP	0.58	□□□□□ -2.32
RRT1	YBL048W	CBF1	P17106	351 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	OCH1	P31755	480 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	PAN3	P36102	679 aa	Predicted RBP	0.58	□□□□□ -2.32
RRT1	YBL048W	TVP23	P38962	199 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	RIO2	P40160	425 aa	Known RBP	0.58	□□□□□ -2.32
RRT1	YBL048W	ERG10	P41338	398 aa	Known RBP	0.58	□□□□□ -2.32
RRT1	YBL048W	MPC3	P53311	146 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	GGA1	Q06336	557 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	YCL012C	Q8J0M4	134 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	ODC2	Q99297	307 aa		0.58	□□□□□ -2.32
RRT1	YBL048W	ACC1	Q00955	2233 aa	Known RBP	0.58	□□□□□ -2.32
RRT1	YBL048W	MBF1	O14467	151 aa	Known RBP	0.57	□□□□□ -2.32
RRT1	YBL048W	VAR1	P02381	398 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	MATALPHA2	P0CY08	210 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	HMLALPHA2	P0CY09	210 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	SPO13	P23624	291 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	YCR090C	P25654	182 aa	Known RBP	0.57	□□□□□ -2.32
RRT1	YBL048W	YKT6	P36015	200 aa	Known RBP	0.57	□□□□□ -2.32
RRT1	YBL048W	YER034W	P40022	185 aa	Known RBP	0.57	□□□□□ -2.32
RRT1	YBL048W	YPL073C	P40323	161 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	RFC4	P40339	323 aa	Known RBP	0.57	□□□□□ -2.32
RRT1	YBL048W	YMR226C	Q05016	267 aa	Known RBP	0.57	□□□□□ -2.32
RRT1	YBL048W	YHR007C-A	Q07074	71 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	DGA1	Q08650	418 aa		0.57	□□□□□ -2.32
RRT1	YBL048W	MRS1	P07266	363 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	AQY2	P0CD90	149 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	CNB1	P25296	175 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	YEA4	P40004	342 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	FLX1	P40464	311 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	SER2	P42941	309 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	SKI6	P46948	246 aa	Predicted RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	ARP3	P47117	449 aa	Known RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	ARO8	P53090	500 aa	Known RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	MMS2	P53152	137 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	GET1	P53192	235 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	NOP19	P53317	196 aa	Predicted RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	YNL247W	P53852	767 aa	Known RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	RCE1	Q03530	315 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	FUS2	Q05670	677 aa		0.56	□□□□□ -2.32
RRT1	YBL048W	YPR174C	Q06616	221 aa	Predicted RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	ABP140	Q08641	628 aa	Known RBP	0.56	□□□□□ -2.32
RRT1	YBL048W	YAR023C	D6VPM8	179 aa		0.55	□□□□□ -2.32
RRT1	YBL048W	MDM35	O60200	86 aa		0.55	□□□□□ -2.32
RRT1	YBL048W	YPK2	P18961	677 aa		0.55	□□□□□ -2.32
RRT1	YBL048W	ASF2	P32448	525 aa	Predicted RBP	0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms