RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W AGA2P32781 87 aa5.6□□□□□ -1.51
SWD1YAR003W SWD2P36104 329 aaPredicted RBP5.6□□□□□ -1.51
SWD1YAR003W YPC1P38298 316 aa5.6□□□□□ -1.51
SWD1YAR003W LSM12P38828 187 aaKnown RBP5.6□□□□□ -1.51
SWD1YAR003W PCL7P40186 285 aa5.6□□□□□ -1.51
SWD1YAR003W GLR1P41921 483 aaKnown RBP5.6□□□□□ -1.51
SWD1YAR003W RPL21AQ02753 160 aaKnown RBP5.6□□□□□ -1.51
SWD1YAR003W DCS1Q06151 350 aa5.6□□□□□ -1.51
SWD1YAR003W TMC1Q08422 150 aaPredicted RBP5.6□□□□□ -1.51
SWD1YAR003W YNG1Q08465 219 aa5.6□□□□□ -1.51
SWD1YAR003W FEX2Q08991 375 aa5.6□□□□□ -1.51
SWD1YAR003W SWT1Q12104 458 aa5.6□□□□□ -1.51
SWD1YAR003W YCT1Q12235 531 aa5.6□□□□□ -1.51
SWD1YAR003W RPL21BQ12672 160 aaKnown RBP5.6□□□□□ -1.51
SWD1YAR003W YOR192C-CQ3E736 78 aa5.6□□□□□ -1.51
SWD1YAR003W YPR108W-AQ3E7B3 70 aa5.6□□□□□ -1.51
SWD1YAR003W APA2P22108 325 aa5.59□□□□□ -1.51
SWD1YAR003W MRP20P32387 263 aa5.59□□□□□ -1.51
SWD1YAR003W SOR1P35497 357 aaKnown RBP5.59□□□□□ -1.51
SWD1YAR003W YKL069WP36088 180 aa5.59□□□□□ -1.51
SWD1YAR003W ERV15P38312 142 aa5.59□□□□□ -1.51
SWD1YAR003W CTR2P38865 189 aa5.59□□□□□ -1.51
SWD1YAR003W POP2P39008 433 aa5.59□□□□□ -1.51
SWD1YAR003W PIR5P46999 287 aa5.59□□□□□ -1.51
SWD1YAR003W YHC3P47040 408 aa5.59□□□□□ -1.51
SWD1YAR003W PUS4P48567 403 aaKnown RBP5.59□□□□□ -1.51
SWD1YAR003W CWC25P53854 179 aaKnown RBP5.59□□□□□ -1.51
SWD1YAR003W SOR2Q07786 357 aa5.59□□□□□ -1.51
SWD1YAR003W YOR292CQ08743 309 aa5.59□□□□□ -1.51
SWD1YAR003W YDL009CQ12210 107 aa5.59□□□□□ -1.51
SWD1YAR003W ATP10P18496 279 aa5.58□□□□□ -1.52
SWD1YAR003W IES6P32617 166 aa5.58□□□□□ -1.52
SWD1YAR003W CPR5P35176 225 aa5.58□□□□□ -1.52
SWD1YAR003W SNX4P47057 423 aa5.58□□□□□ -1.52
SWD1YAR003W PKP2P53170 491 aa5.58□□□□□ -1.52
SWD1YAR003W JAC1P53193 184 aa5.58□□□□□ -1.52
SWD1YAR003W INN1P53901 409 aa5.58□□□□□ -1.52
SWD1YAR003W ACT1P60010 375 aaKnown RBP5.58□□□□□ -1.52
SWD1YAR003W DID2P69771 204 aa5.58□□□□□ -1.52
SWD1YAR003W LPP1Q04396 274 aa5.58□□□□□ -1.52
SWD1YAR003W PAM18Q07914 168 aa5.58□□□□□ -1.52
SWD1YAR003W FEX1Q08913 375 aa5.58□□□□□ -1.52
SWD1YAR003W GEP5Q12393 293 aa5.58□□□□□ -1.52
SWD1YAR003W YLR146W-AQ2V2P1 62 aa5.58□□□□□ -1.52
SWD1YAR003W YCL048W-AQ2V2Q2 79 aa5.58□□□□□ -1.52
SWD1YAR003W HUG1Q6Q5K6 68 aa5.58□□□□□ -1.52
SWD1YAR003W ISN1Q99312 450 aa5.58□□□□□ -1.52
SWD1YAR003W STF2P16965 84 aa5.57□□□□□ -1.52
SWD1YAR003W CKS1P20486 150 aaKnown RBP5.57□□□□□ -1.52
SWD1YAR003W YCR061WP25639 631 aa5.57□□□□□ -1.52
SWD1YAR003W TIP1P27654 210 aaPredicted RBP5.57□□□□□ -1.52
SWD1YAR003W PDC2P32896 925 aa5.57□□□□□ -1.52
SWD1YAR003W GPI18P38211 433 aa5.57□□□□□ -1.52
SWD1YAR003W IKI1P38874 309 aa5.57□□□□□ -1.52
SWD1YAR003W PHM8P40025 321 aa5.57□□□□□ -1.52
SWD1YAR003W ABM1P47146 123 aa5.57□□□□□ -1.52
SWD1YAR003W WSC2P53832 503 aa5.57□□□□□ -1.52
SWD1YAR003W VPS28Q02767 242 aa5.57□□□□□ -1.52
SWD1YAR003W NRG1Q03125 231 aa5.57□□□□□ -1.52
SWD1YAR003W HRD1Q08109 551 aa5.57□□□□□ -1.52
SWD1YAR003W FCF2Q12035 217 aaPredicted RBP5.57□□□□□ -1.52
SWD1YAR003W ERG2P32352 222 aa5.56□□□□□ -1.52
SWD1YAR003W SRY1P36007 326 aa5.56□□□□□ -1.52
SWD1YAR003W YHR138CP38841 114 aaPredicted RBP5.56□□□□□ -1.52
SWD1YAR003W NCA3P46955 337 aa5.56□□□□□ -1.52
SWD1YAR003W PNC1P53184 216 aaKnown RBP5.56□□□□□ -1.52
SWD1YAR003W PEF1P53238 335 aa5.56□□□□□ -1.52
SWD1YAR003W GPI15P53961 229 aa5.56□□□□□ -1.52
SWD1YAR003W YPD1Q07688 167 aa5.56□□□□□ -1.52
SWD1YAR003W YOL118CQ08259 102 aa5.56□□□□□ -1.52
SWD1YAR003W RTR2Q12378 196 aa5.56□□□□□ -1.52
SWD1YAR003W TFC7Q12415 435 aa5.56□□□□□ -1.52
SWD1YAR003W ATG31Q12421 196 aa5.56□□□□□ -1.52
SWD1YAR003W YMR105W-AQ8TGS8 64 aa5.56□□□□□ -1.52
SWD1YAR003W TRA1P38811 3744 aa5.56□□□□□ -1.52
SWD1YAR003W YIL012WP40551 113 aa5.55□□□□□ -1.52
SWD1YAR003W YIR020CP40575 100 aa5.55□□□□□ -1.52
SWD1YAR003W YGL262WP53054 175 aa5.55□□□□□ -1.52
SWD1YAR003W YDR415CQ04033 374 aaPredicted RBP5.55□□□□□ -1.52
SWD1YAR003W ARR2Q06597 130 aa5.55□□□□□ -1.52
SWD1YAR003W BER1Q06688 274 aaKnown RBP5.55□□□□□ -1.52
SWD1YAR003W YDL086WQ07505 273 aa5.55□□□□□ -1.52
SWD1YAR003W SNA4Q07549 140 aa5.55□□□□□ -1.52
SWD1YAR003W RRT7Q07829 113 aa5.55□□□□□ -1.52
SWD1YAR003W CSI2Q08054 341 aa5.55□□□□□ -1.52
SWD1YAR003W YGL194C-AQ2V2P6 80 aa5.55□□□□□ -1.52
SWD1YAR003W YJR112W-AQ3E743 109 aa5.55□□□□□ -1.52
SWD1YAR003W RPL9AP05738 191 aaKnown RBP5.54□□□□□ -1.52
SWD1YAR003W RTC3P38804 111 aaPredicted RBP5.54□□□□□ -1.52
SWD1YAR003W YJR012CP47087 207 aa5.54□□□□□ -1.52
SWD1YAR003W SRB7P47822 140 aa5.54□□□□□ -1.52
SWD1YAR003W RPL9BP51401 191 aaKnown RBP5.54□□□□□ -1.52
SWD1YAR003W YGL114WP53134 725 aa5.54□□□□□ -1.52
SWD1YAR003W YMR090WQ04304 227 aaKnown RBP5.54□□□□□ -1.52
SWD1YAR003W ASM4Q05166 528 aa5.54□□□□□ -1.52
SWD1YAR003W YOS1Q3E834 85 aa5.54□□□□□ -1.52
SWD1YAR003W ADE8P04161 214 aa5.53□□□□□ -1.52
SWD1YAR003W YMR31P19955 123 aa5.53□□□□□ -1.52
SWD1YAR003W ROX3P25046 220 aa5.53□□□□□ -1.52
SWD1YAR003W REC104P33323 182 aa5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms