RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 MGAMO43451 1857 aa16.71■□□□□ 0.27
PCCB-204ENST00000462637 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 THAP12O43422 761 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 KRT19P08727 400 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 P4HA1P13674 534 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 GJA9P57773 515 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 ZNF667Q5HYK9 610 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 LIN9Q5TKA1 542 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 MCOLN2Q8IZK6 566 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 C1orf127Q8N9H9 656 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 ZNF564Q8TBZ8 553 aaPredicted RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 VCPIP1Q96JH7 1222 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 VRTNQ9H8Y1 702 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 CNOT8Q9UFF9 292 aaKnown RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 ITGA11Q9UKX5 1188 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 GINS2Q9Y248 185 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 DERAQ9Y315 318 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 CEP104O60308 925 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 LSM8O95777 96 aaKnown RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 EIF4BP23588 611 aaKnown RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 HOXC8P31273 242 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 ASPAP45381 313 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 TNNC1P63316 161 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 TMEM62Q0P6H9 643 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 RASGEF1CQ8N431 466 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 UBL4BQ8N7F7 174 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 PXYLP1Q8TE99 480 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 DNAJB3Q8WWF6 145 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 OSMRQ99650 979 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■□□□ 14
PCCB-204ENST00000462637 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 CARD9Q9H257 536 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 FAM124BQ9H5Z6 455 aaPredicted RBP16.7■□□□□ 0.26
PCCB-204ENST00000462637 ZNF446Q9NWS9 450 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 SIX4Q9UIU6 781 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 ALG6Q9Y672 507 aa16.7■□□□□ 0.26
PCCB-204ENST00000462637 ZRANB2O95218 330 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCCB-204ENST00000462637 NPTXRO95502 500 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 ITGB3P05106 788 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 CD58P19256 250 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 HOXA11P31270 313 aaPredicted RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 YARSP54577 528 aaKnown RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 NAA35Q5VZE5 725 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 TAF2Q6P1X5 1199 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 PHF13Q86YI8 300 aaPredicted RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 BCO2Q9BYV7 579 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 UPF3AQ9H1J1 476 aaKnown RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 CYP3A43Q9HB55 503 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 RBM12Q9NTZ6 932 aaKnown RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 SMARCAL1Q9NZC9 954 aa16.69■□□□□ 0.26
PCCB-204ENST00000462637 TTC7AQ9ULT0 858 aaPredicted RBP16.69■□□□□ 0.26
PCCB-204ENST00000462637 DDX3YO15523 660 aaKnown RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 MEFVO15553 781 aaPredicted RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 TREHO43280 583 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 ATMINO43313 823 aaPredicted RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 CALCAP01258 141 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 FGFR4P22455 802 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 PRMT2P55345 433 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 VSNL1P62760 191 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 NOMO3P69849 1222 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 RBP5P82980 135 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 MAP9Q49MG5 647 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 SCARA3Q6AZY7 606 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 C8orf74Q6P047 294 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 ZNF606Q8WXB4 792 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 CPA5Q8WXQ8 436 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 CYFIP2Q96F07 1278 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 NAP1L3Q99457 506 aaPredicted RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 WNT8AQ9H1J5 351 aa16.68■□□□□ 0.26
PCCB-204ENST00000462637 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
PCCB-204ENST00000462637 HMGCRP04035 888 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
PCCB-204ENST00000462637 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
PCCB-204ENST00000462637 NKX3-2P78367 333 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 CBX1P83916 185 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 HIC1Q14526 733 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 MESDQ14696 234 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 SNX17Q15036 470 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 PTPROQ16827 1216 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 WDR72Q3MJ13 1102 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 GNASQ5JWF2 1037 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 SCARA5Q6ZMJ2 495 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 MON1BQ7L1V2 547 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 ZNF518BQ9C0D4 1074 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 CDHR5Q9HBB8 845 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 MRPL47Q9HD33 250 aaKnown RBP16.67■□□□□ 0.26
PCCB-204ENST00000462637 DPP3Q9NY33 737 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 TMEM59LQ9UK28 342 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 EVPLQ92817 2033 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 FAM170AA1A519 330 aa16.67■□□□□ 0.26
PCCB-204ENST00000462637 CCDC188H7C350 402 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms