RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 PRKAR2AP13861 404 aaKnown RBP22.94■■□□□ 1.26
GMDS-202ENST00000380815 NSFP46459 744 aaKnown RBP22.94■■□□□ 1.26
GMDS-202ENST00000380815 MCOLN2Q8IZK6 566 aa22.94■■□□□ 1.26
GMDS-202ENST00000380815 ZNF606Q8WXB4 792 aa22.94■■□□□ 1.26
GMDS-202ENST00000380815 CYFIP2Q96F07 1278 aa22.94■■□□□ 1.26
GMDS-202ENST00000380815 DPP3Q9NY33 737 aa22.94■■□□□ 1.26
GMDS-202ENST00000380815 SNTG2Q9NY99 539 aa22.94■■□□□ 1.26
GMDS-202ENST00000380815 NXF1Q9UBU9 619 aaKnown RBP22.94■■□□□ 1.26
GMDS-202ENST00000380815 CITO14578 2027 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 STAU1O95793 577 aaKnown RBP22.93■■□□□ 1.26
GMDS-202ENST00000380815 HOXD10P28358 340 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 YARSP54577 528 aaKnown RBP22.93■■□□□ 1.26
GMDS-202ENST00000380815 RBP5P82980 135 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 MMGT1Q8N4V1 131 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 KIF12Q96FN5 646 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 MS4A14Q96JA4 679 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 SNX27Q96L92 541 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 NUP85Q9BW27 656 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 CELF4Q9BZC1 486 aaKnown RBP22.93■■□□□ 1.26
GMDS-202ENST00000380815 TRIM6Q9C030 488 aaPredicted RBP22.93■■□□□ 1.26
GMDS-202ENST00000380815 AVENQ9NQS1 362 aaPredicted RBP22.93■■□□□ 1.26
GMDS-202ENST00000380815 SRRDQ9UH36 339 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 RAB21Q9UL25 225 aa22.93■■□□□ 1.26
GMDS-202ENST00000380815 PIN4Q9Y237 131 aaKnown RBP22.93■■□□□ 1.26
GMDS-202ENST00000380815 ATMINO43313 823 aaPredicted RBP22.92■■□□□ 1.26
GMDS-202ENST00000380815 RHOXF2BP0C7M4 288 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 P4HA1P13674 534 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 CCND3P30281 292 aaPredicted RBP22.92■■□□□ 1.26
GMDS-202ENST00000380815 POLR2BP30876 1174 aaKnown RBP22.92■■□□□ 1.26
GMDS-202ENST00000380815 CLCN6P51797 869 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 NOMO3P69849 1222 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 NAA35Q5VZE5 725 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 SCARA5Q6ZMJ2 495 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 KLHDC9Q8NEP7 349 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 ZNF564Q8TBZ8 553 aaPredicted RBP22.92■■□□□ 1.26
GMDS-202ENST00000380815 CPA5Q8WXQ8 436 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 VCPIP1Q96JH7 1222 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 RHOXF2Q9BQY4 288 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 SELENOOQ9BVL4 669 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 CNOT8Q9UFF9 292 aaKnown RBP22.92■■□□□ 1.26
GMDS-202ENST00000380815 POLIQ9UNA4 740 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 ALG6Q9Y672 507 aa22.92■■□□□ 1.26
GMDS-202ENST00000380815 ELNP15502 786 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 CST5P28325 142 aaPredicted RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 C2orf54Q08AI8 447 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 ALKAL1Q6UXT8 129 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 HPDLQ96IR7 371 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 RPS6KC1Q96S38 1066 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 FAM124BQ9H5Z6 455 aaPredicted RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 CYP3A43Q9HB55 503 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 EHD2Q9NZN4 543 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 AGAP1Q9UPQ3 857 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 LSM8O95777 96 aaKnown RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 RPLP2P05387 115 aaKnown RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 CFHP08603 1231 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 APLP1P51693 650 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 MRPS6P82932 125 aaKnown RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 PTPROQ16827 1216 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 GDF6Q6KF10 455 aaPredicted RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 MON1BQ7L1V2 547 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 RSPH3Q86UC2 560 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 SESTD1Q86VW0 696 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 PHF13Q86YI8 300 aaPredicted RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 ACTRT1Q8TDG2 376 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 SMARCAL1Q9NZC9 954 aa22.91■■□□□ 1.26
GMDS-202ENST00000380815 CHORDC1Q9UHD1 332 aaPredicted RBP22.91■■□□□ 1.26
GMDS-202ENST00000380815 RALGAPA2Q2PPJ7 1873 aa22.9■■□□□ 1.26
GMDS-202ENST00000380815 TARSL2A2RTX5 802 aaKnown RBP22.9■■□□□ 1.26
GMDS-202ENST00000380815 TRPA1O75762 1119 aa22.9■■□□□ 1.26
GMDS-202ENST00000380815 BRD3Q15059 726 aa22.9■■□□□ 1.26
GMDS-202ENST00000380815 ZBTB6Q15916 424 aa22.9■■□□□ 1.26
GMDS-202ENST00000380815 CCSAPQ6IQ19 270 aaPredicted RBP22.9■■□□□ 1.26
GMDS-202ENST00000380815 PNKPQ96T60 521 aa22.9■■□□□ 1.26
GMDS-202ENST00000380815 NXF3Q9H4D5 531 aaKnown RBP22.9■■□□□ 1.26
GMDS-202ENST00000380815 CNTN3Q9P232 1028 aa22.9■■□□□ 1.26
GMDS-202ENST00000380815 CCDC151A5D8V7 595 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 MIF4GDA9UHW6 222 aaKnown RBP22.89■■□□□ 1.26
GMDS-202ENST00000380815 M0QZ92 97 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 DDX3YO15523 660 aaKnown RBP22.89■■□□□ 1.26
GMDS-202ENST00000380815 HMGCRP04035 888 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 ASGR1P07306 291 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 GUCY2FP51841 1108 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 KCNA10Q16322 511 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 ZNF394Q53GI3 561 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 UBXN11Q5T124 520 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 MAP3K21Q5TCX8 1036 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 RPAINQ86UA6 219 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 SERINC5Q86VE9 423 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 PASD1Q8IV76 773 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 TMEM130Q8N3G9 435 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 TSPAN18Q96SJ8 248 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 PCDHGC3Q9UN70 934 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 HES2Q9Y543 173 aa22.89■■□□□ 1.26
GMDS-202ENST00000380815 PCNTO95613 3336 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 RECQL4O94761 1208 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 PAEPP09466 180 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 MAP2K2P36507 400 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 C1QBPQ07021 282 aaKnown RBP22.89■■□□□ 1.25
GMDS-202ENST00000380815 CCDC70Q6NSX1 233 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 WDR93Q6P2C0 686 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms