RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 NF2P35240 595 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 C1QBPQ07021 282 aaKnown RBP20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 NEDD9Q14511 834 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 ERMARDQ5T6L9 678 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 FAM160B1Q5W0V3 765 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 C6orf89Q6UWU4 347 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■■■■ 48.7
CDC42EP1-201ENST00000249014 C3orf20Q8ND61 904 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 SEPT1Q8WYJ6 367 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 SNF8Q96H20 258 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 XPO6Q96QU8 1125 aaKnown RBP20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 MTMR12Q9C0I1 747 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 CCDC113Q9H0I3 377 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 PAPPA2Q9BXP8 1791 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 ARIH2O95376 493 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 CD58P19256 250 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 MARK3P27448 753 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 RPL7AP62424 266 aaKnown RBP20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 AUHQ13825 339 aaKnown RBP20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 TNFAIP8L3Q5GJ75 292 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 METTL7BQ6UX53 244 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 MICALCLQ6ZW33 695 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 TRIM50Q86XT4 487 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 CENPTQ96BT3 561 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 CCDC114Q96M63 670 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 SELENOSQ9BQE4 189 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 TMEM51Q9NW97 253 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 NEU2Q9Y3R4 380 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 MGAMO43451 1857 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 RASGRF2O14827 1237 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 KIAA0754O94854 1291 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 AGTP01019 485 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 POTEJP0CG39 1038 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 GJC1P36383 396 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 ITGA8P53708 1063 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 SYDE1Q6ZW31 735 aaPredicted RBP20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 TRMT10CQ7L0Y3 403 aaKnown RBP20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 YTHDF3Q7Z739 585 aaKnown RBP20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 WDR49Q8IV35 697 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 KATNAL2Q8IYT4 538 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 ATL2Q8NHH9 583 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 TCHPQ9BT92 498 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 GGA2Q9UJY4 613 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 SCINQ9Y6U3 715 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 C5orf60A6NFR6 353 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 TOM1L1O75674 476 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 ACSL3O95573 720 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 SRGAP2CP0DJJ0 459 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 TCF4P15884 667 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 MMP8P22894 467 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 MAN1A1P33908 653 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 MYL6P60660 151 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 IFT88Q13099 833 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 GPC2Q8N158 579 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 OTUD6BQ8N6M0 293 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 FEZF2Q8TBJ5 459 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 GRK7Q8WTQ7 553 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 ACO2Q99798 780 aaKnown RBP20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 MRPL4Q9BYD3 311 aaKnown RBP20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 OSBPL8Q9BZF1 889 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 IMPG2Q9BZV3 1241 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 PARVAQ9NVD7 372 aa20.75■□□□□ 0.91
CDC42EP1-201ENST00000249014 GAS8O95995 478 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 TGFB3P10600 412 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 SSR1P43307 286 aaKnown RBP20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 VPS41P49754 854 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 LAMTOR4Q0VGL1 99 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 HSDL1Q3SXM5 330 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 ATP13A4Q4VNC1 1196 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 GADL1Q6ZQY3 521 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 LRRC71Q8N4P6 559 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 NLGN2Q8NFZ4 835 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 ATXN2LQ8WWM7 1075 aaKnown RBP20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 FAM212AQ96EL1 285 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 DNAJC17Q9NVM6 304 aaKnown RBP20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 KLHL11Q9NVR0 708 aa20.74■□□□□ 0.91
CDC42EP1-201ENST00000249014 ZBTB42B2RXF5 422 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 ABLIM1O14639 778 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 CDR1P51861 262 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 EFNA5P52803 228 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 CCNG2Q16589 344 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 LONRF1Q17RB8 773 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 TTC31Q49AM3 519 aaPredicted RBP20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 ZNF394Q53GI3 561 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 CDCA2Q69YH5 1023 aaPredicted RBP20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 CROCCP2Q86T23 111 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 RNF149Q8NC42 400 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 EXD1Q8NHP7 514 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 PWWP2AQ96N64 755 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 ATF2P15336 505 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 DRD4P21917 467 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 BRD2P25440 801 aaKnown RBP20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 ADCY8P40145 1251 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 ZNF252P-AS1Q0IIN9 211 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 CCDC38Q502W7 563 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 IER5Q5VY09 327 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 MFSD5Q6N075 450 aa20.73■□□□□ 0.91
CDC42EP1-201ENST00000249014 KAT2BQ92831 832 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms