RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B ALA1P40825 983 aaKnown RBP2.6□□□□□ -1.99
snR39BsnR39B FRA1Q07825 749 aa2.6□□□□□ -1.99
snR39BsnR39B MCA1Q08601 432 aa2.6□□□□□ -1.99
snR39BsnR39B RAD59Q12223 238 aa2.6□□□□□ -1.99
snR39BsnR39B PDC5P16467 563 aaKnown RBP2.59□□□□□ -1.99
snR39BsnR39B UTR2P32623 467 aa2.59□□□□□ -1.99
snR39BsnR39B CSN12P47130 423 aa2.59□□□□□ -1.99
snR39BsnR39B ALO1P54783 526 aaKnown RBP2.59□□□□□ -1.99
snR39BsnR39B TY1A-DR3Q12441 440 aa2.59□□□□□ -1.99
snR39BsnR39B MAK16P10962 306 aaPredicted RBP2.58□□□□□ -2
snR39BsnR39B IRE1P32361 1115 aa2.58□□□□□ -2
snR39BsnR39B NAB2P32505 525 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
snR39BsnR39B MRPL16P38064 232 aa2.58□□□□□ -2
snR39BsnR39B TPS3P38426 1054 aaKnown RBP2.58□□□□□ -2
snR39BsnR39B JJJ2P46997 583 aa2.58□□□□□ -2
snR39BsnR39B INP52P50942 1183 aa2.58□□□□□ -2
snR39BsnR39B AIM7Q12156 149 aa2.58□□□□□ -2
snR39BsnR39B SSA2P10592 639 aaKnown RBP2.57□□□□□ -2
snR39BsnR39B KTR1P27810 393 aaKnown RBP2.57□□□□□ -2
snR39BsnR39B SUM1P46676 1062 aa2.57□□□□□ -2
snR39BsnR39B GLC3P32775 704 aa2.56□□□□□ -2
snR39BsnR39B PRY1P47032 299 aa2.56□□□□□ -2
snR39BsnR39B ISR1Q06098 443 aaKnown RBP2.56□□□□□ -2
snR39BsnR39B STB3Q12427 513 aa2.56□□□□□ -2
snR39BsnR39B NHA1Q99271 985 aa2.56□□□□□ -2
snR39BsnR39B ATG3P40344 310 aa2.55□□□□□ -2
snR39BsnR39B SPR3P41901 512 aa2.55□□□□□ -2
snR39BsnR39B AVT1P47082 602 aa2.55□□□□□ -2
snR39BsnR39B TY1A-DR2Q03964 440 aaKnown RBP2.55□□□□□ -2
snR39BsnR39B UTP7P40055 554 aaKnown RBP2.54□□□□□ -2
snR39BsnR39B AOS1Q06624 347 aa2.54□□□□□ -2
snR39BsnR39B PDC6P26263 563 aaKnown RBP2.53□□□□□ -2
snR39BsnR39B SPT5P27692 1063 aaKnown RBP2.53□□□□□ -2
snR39BsnR39B CSE4P36012 229 aa2.53□□□□□ -2
snR39BsnR39B HEH2Q03281 663 aa2.53□□□□□ -2
snR39BsnR39B UTP13Q05946 817 aaKnown RBP2.53□□□□□ -2
snR39BsnR39B MED7Q08278 222 aa2.53□□□□□ -2
snR39BsnR39B PSH1Q12161 406 aa2.53□□□□□ -2
snR39BsnR39B APL6P46682 809 aa2.52□□□□□ -2.01
snR39BsnR39B BUD9P53226 547 aa2.52□□□□□ -2.01
snR39BsnR39B AI3P03877 415 aa2.51□□□□□ -2.01
snR39BsnR39B LEU1P07264 779 aaKnown RBP2.51□□□□□ -2.01
snR39BsnR39B SAC7P17121 654 aa2.51□□□□□ -2.01
snR39BsnR39B COQ2P32378 372 aa2.51□□□□□ -2.01
snR39BsnR39B KAE1P36132 386 aa2.51□□□□□ -2.01
snR39BsnR39B ALG14P38242 237 aa2.51□□□□□ -2.01
snR39BsnR39B SLX8P40072 274 aa2.51□□□□□ -2.01
snR39BsnR39B YTA6P40328 754 aa2.51□□□□□ -2.01
snR39BsnR39B EMP47P43555 445 aa2.51□□□□□ -2.01
snR39BsnR39B SFA1P32771 386 aa2.5□□□□□ -2.01
snR39BsnR39B ELM1P32801 640 aa2.5□□□□□ -2.01
snR39BsnR39B PGM1P33401 570 aaKnown RBP2.5□□□□□ -2.01
snR39BsnR39B PGM2P37012 569 aaKnown RBP2.5□□□□□ -2.01
snR39BsnR39B SHM1P37292 490 aaPredicted RBP2.5□□□□□ -2.01
snR39BsnR39B YPP1P46951 817 aa2.5□□□□□ -2.01
snR39BsnR39B ARI1P53111 347 aaKnown RBP2.5□□□□□ -2.01
snR39BsnR39B HPC2Q01448 625 aa2.5□□□□□ -2.01
snR39BsnR39B TFB3Q03290 321 aa2.5□□□□□ -2.01
snR39BsnR39B MCM16Q12262 181 aa2.5□□□□□ -2.01
snR39BsnR39B RGP1P16664 663 aa2.49□□□□□ -2.01
snR39BsnR39B LIP5P32875 414 aa2.49□□□□□ -2.01
snR39BsnR39B MSC7P38694 644 aa2.48□□□□□ -2.01
snR39BsnR39B HDA3Q06623 655 aa2.48□□□□□ -2.01
snR39BsnR39B RPS31P05759 152 aaKnown RBP2.47□□□□□ -2.01
snR39BsnR39B MCM1P11746 286 aa2.47□□□□□ -2.01
snR39BsnR39B RSC6P25632 483 aa2.47□□□□□ -2.01
snR39BsnR39B PUB1P32588 453 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
snR39BsnR39B HAL5P38970 855 aaKnown RBP2.47□□□□□ -2.01
snR39BsnR39B YFL034WP43564 1073 aa2.47□□□□□ -2.01
snR39BsnR39B NCL1P38205 684 aaKnown RBP2.46□□□□□ -2.02
snR39BsnR39B TOS1P38288 455 aa2.46□□□□□ -2.02
snR39BsnR39B RRM3P38766 723 aa2.46□□□□□ -2.02
snR39BsnR39B UBP5P39944 805 aa2.46□□□□□ -2.02
snR39BsnR39B GIS4Q04233 774 aa2.46□□□□□ -2.02
snR39BsnR39B YPQ2Q06328 317 aa2.46□□□□□ -2.02
snR39BsnR39B SLP1Q12232 587 aa2.46□□□□□ -2.02
snR39BsnR39B CHS2P14180 963 aa2.45□□□□□ -2.02
snR39BsnR39B NAR1P23503 491 aaKnown RBP2.45□□□□□ -2.02
snR39BsnR39B ISF1P32488 338 aa2.45□□□□□ -2.02
snR39BsnR39B SOH1P38633 127 aa2.45□□□□□ -2.02
snR39BsnR39B BRE4Q07660 1125 aa2.45□□□□□ -2.02
snR39BsnR39B TRP3P00937 484 aa2.44□□□□□ -2.02
snR39BsnR39B SWI5P08153 709 aa2.44□□□□□ -2.02
snR39BsnR39B YKR073CP36153 106 aa2.44□□□□□ -2.02
snR39BsnR39B SAF1P38352 637 aa2.44□□□□□ -2.02
snR39BsnR39B ALD2P47771 506 aa2.44□□□□□ -2.02
snR39BsnR39B YLR122CQ12312 125 aa2.44□□□□□ -2.02
snR39BsnR39B YBL036CP38197 257 aa2.43□□□□□ -2.02
snR39BsnR39B PRK1P40494 810 aa2.43□□□□□ -2.02
snR39BsnR39B CBC2Q08920 208 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
snR39BsnR39B DMA1P38823 416 aa2.42□□□□□ -2.02
snR39BsnR39B AIM9P40053 627 aaKnown RBP2.42□□□□□ -2.02
snR39BsnR39B SKP1P52286 194 aa2.42□□□□□ -2.02
snR39BsnR39B UTP4Q06679 776 aaKnown RBP2.42□□□□□ -2.02
snR39BsnR39B RPS6AP0CX37 236 aaKnown RBP2.41□□□□□ -2.02
snR39BsnR39B RPS6BP0CX38 236 aaPredicted RBP2.41□□□□□ -2.02
snR39BsnR39B MLF3P32047 452 aa2.41□□□□□ -2.02
snR39BsnR39B NIT1P40447 199 aa2.41□□□□□ -2.02
snR39BsnR39B CTH1P47976 325 aa2.41□□□□□ -2.02
snR39BsnR39B YGR130CP53278 816 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms