RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C ELP4Q02884 456 aaKnown RBP7.29□□□□□ -1.24
VPS4YPR173C YDR344CQ05510 147 aa7.29□□□□□ -1.24
VPS4YPR173C MMP1Q12372 583 aa7.29□□□□□ -1.24
VPS4YPR173C SCJ1P25303 377 aa7.28□□□□□ -1.24
VPS4YPR173C YIL092WP40497 633 aa7.28□□□□□ -1.24
VPS4YPR173C RRP46P53256 223 aaPredicted RBP7.28□□□□□ -1.24
VPS4YPR173C TRM3Q07527 1436 aa7.28□□□□□ -1.24
VPS4YPR173C KRE5P22023 1365 aa7.28□□□□□ -1.24
VPS4YPR173C PDR1P12383 1068 aa7.27□□□□□ -1.24
VPS4YPR173C SPT23P35210 1082 aa7.27□□□□□ -1.24
VPS4YPR173C IPL1P38991 367 aa7.27□□□□□ -1.24
VPS4YPR173C POL32P47110 350 aa7.27□□□□□ -1.24
VPS4YPR173C URN1Q06525 465 aaKnown RBP7.27□□□□□ -1.24
VPS4YPR173C RAD9P14737 1309 aa7.27□□□□□ -1.25
VPS4YPR173C ESS1P22696 170 aa7.27□□□□□ -1.25
VPS4YPR173C PKC1P24583 1151 aa7.27□□□□□ -1.25
VPS4YPR173C TPD3P31383 635 aa7.27□□□□□ -1.25
VPS4YPR173C NUD1P32336 851 aa7.27□□□□□ -1.25
VPS4YPR173C TYS1P36421 394 aaKnown RBP7.27□□□□□ -1.25
VPS4YPR173C SLN1P39928 1220 aaPredicted RBP7.27□□□□□ -1.25
VPS4YPR173C RTF1P53064 558 aa7.27□□□□□ -1.25
VPS4YPR173C YML133CQ03099 1374 aa7.26□□□□□ -1.25
VPS4YPR173C YLL067CQ07888 1374 aa7.26□□□□□ -1.25
VPS4YPR173C YLL066CQ99208 1374 aa7.26□□□□□ -1.25
VPS4YPR173C DAL5P15365 543 aa7.26□□□□□ -1.25
VPS4YPR173C MSP1P28737 362 aa7.26□□□□□ -1.25
VPS4YPR173C PRE3P38624 215 aa7.26□□□□□ -1.25
VPS4YPR173C LSP1Q12230 341 aaKnown RBP7.26□□□□□ -1.25
VPS4YPR173C HAP1P0CE41 1502 aa7.25□□□□□ -1.25
VPS4YPR173C PRD1P25375 712 aa7.25□□□□□ -1.25
VPS4YPR173C DJP1P40564 432 aa7.25□□□□□ -1.25
VPS4YPR173C PKH3Q03306 898 aaPredicted RBP7.25□□□□□ -1.25
VPS4YPR173C THI22Q06490 572 aa7.25□□□□□ -1.25
VPS4YPR173C KAR2P16474 682 aaKnown RBP7.24□□□□□ -1.25
VPS4YPR173C NPL4P33755 580 aa7.24□□□□□ -1.25
VPS4YPR173C HEF3P53978 1044 aaKnown RBP7.24□□□□□ -1.25
VPS4YPR173C RLF2Q12495 606 aa7.24□□□□□ -1.25
VPS4YPR173C YRF1-4O13559 1382 aa7.23□□□□□ -1.25
VPS4YPR173C SIR4P11978 1358 aa7.23□□□□□ -1.25
VPS4YPR173C RAM1P22007 431 aa7.23□□□□□ -1.25
VPS4YPR173C SLY41P22215 453 aa7.23□□□□□ -1.25
VPS4YPR173C CHL1P22516 861 aaPredicted RBP7.23□□□□□ -1.25
VPS4YPR173C PTC2P39966 464 aaKnown RBP7.23□□□□□ -1.25
VPS4YPR173C YNL115CP53925 644 aa7.23□□□□□ -1.25
VPS4YPR173C TAP42Q04372 366 aa7.23□□□□□ -1.25
VPS4YPR173C CAB1Q04430 367 aa7.23□□□□□ -1.25
VPS4YPR173C EDE1P34216 1381 aa7.22□□□□□ -1.25
VPS4YPR173C NOT3P06102 836 aaKnown RBP7.22□□□□□ -1.25
VPS4YPR173C KEX2P13134 814 aa7.22□□□□□ -1.25
VPS4YPR173C YJU3P28321 313 aa7.22□□□□□ -1.25
VPS4YPR173C ARL1P38116 183 aaKnown RBP7.22□□□□□ -1.25
VPS4YPR173C YML082WQ04533 649 aaKnown RBP7.22□□□□□ -1.25
VPS4YPR173C STR2P47164 639 aa7.21□□□□□ -1.26
VPS4YPR173C ISM1P48526 1002 aa7.21□□□□□ -1.26
VPS4YPR173C ERF2Q06551 359 aa7.21□□□□□ -1.26
VPS4YPR173C CSE4P36012 229 aa7.2□□□□□ -1.26
VPS4YPR173C ECM16Q04217 1267 aaKnown RBP7.2□□□□□ -1.26
VPS4YPR173C PUF6Q04373 656 aaKnown RBP7.2□□□□□ -1.26
VPS4YPR173C RAD59Q12223 238 aa7.2□□□□□ -1.26
VPS4YPR173C ARG8P18544 423 aa7.19□□□□□ -1.26
VPS4YPR173C YJL007CP47080 104 aa7.19□□□□□ -1.26
VPS4YPR173C PAP2P53632 584 aaKnown RBP7.19□□□□□ -1.26
VPS4YPR173C PDI1P17967 522 aaKnown RBP7.18□□□□□ -1.26
VPS4YPR173C GCD11P32481 527 aaKnown RBP7.18□□□□□ -1.26
VPS4YPR173C YBL036CP38197 257 aa7.18□□□□□ -1.26
VPS4YPR173C RTT109Q07794 436 aa7.18□□□□□ -1.26
VPS4YPR173C DNF3Q12674 1656 aa7.18□□□□□ -1.26
VPS4YPR173C PSK1P31374 1356 aa7.17□□□□□ -1.26
VPS4YPR173C GRX4P32642 244 aa7.17□□□□□ -1.26
VPS4YPR173C BCK2P33306 851 aa7.17□□□□□ -1.26
VPS4YPR173C ITC1P53125 1264 aa7.16□□□□□ -1.26
VPS4YPR173C LAM6Q08001 693 aa7.16□□□□□ -1.26
VPS4YPR173C BUD20Q08004 166 aaPredicted RBP7.16□□□□□ -1.26
VPS4YPR173C YPR015CQ12531 247 aa7.16□□□□□ -1.26
VPS4YPR173C LEU2P04173 364 aaPredicted RBP7.15□□□□□ -1.26
VPS4YPR173C KNS1P32350 737 aaPredicted RBP7.15□□□□□ -1.26
VPS4YPR173C BIM1P40013 344 aa7.15□□□□□ -1.26
VPS4YPR173C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
VPS4YPR173C COG8Q04632 607 aa7.15□□□□□ -1.26
VPS4YPR173C HIM1Q06674 414 aa7.15□□□□□ -1.26
VPS4YPR173C TY1A-DR4O74302 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-HP0C2I4 478 aaKnown RBP7.14□□□□□ -1.27
VPS4YPR173C TY1A-AP0CX57 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-PR1P0CX58 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-ORP0CX59 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-PR2P0CX60 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-DR5P0CX65 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-ER2P0CX66 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-GR3P0CX67 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-LR1P0CX68 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-MR2P0CX69 440 aa7.14□□□□□ -1.27
VPS4YPR173C SEC2P17065 759 aa7.14□□□□□ -1.27
VPS4YPR173C RSC30P38781 883 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-JR2P47099 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-DR1Q03856 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-ML1Q04706 440 aaKnown RBP7.14□□□□□ -1.27
VPS4YPR173C TY1A-BRQ12217 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-NL2Q12470 440 aa7.14□□□□□ -1.27
VPS4YPR173C TY1A-GR2Q12485 440 aa7.14□□□□□ -1.27
VPS4YPR173C PUS6P53294 404 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms