RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W SLX8P40072 274 aa8.44□□□□□ -1.06
TFB4YPR056W ROG3P43602 733 aa8.44□□□□□ -1.06
TFB4YPR056W YRB30P53107 440 aaPredicted RBP8.44□□□□□ -1.06
TFB4YPR056W ENO1P00924 437 aaKnown RBP8.43□□□□□ -1.06
TFB4YPR056W TOP1P04786 769 aa8.42□□□□□ -1.06
TFB4YPR056W SSN3P39073 555 aa8.41□□□□□ -1.06
TFB4YPR056W PEP12P32854 288 aa8.4□□□□□ -1.06
TFB4YPR056W YFL034WP43564 1073 aa8.4□□□□□ -1.06
TFB4YPR056W SUM1P46676 1062 aa8.4□□□□□ -1.06
TFB4YPR056W SIS2P36024 562 aa8.39□□□□□ -1.07
TFB4YPR056W YGR035CP53222 116 aa8.39□□□□□ -1.07
TFB4YPR056W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
TFB4YPR056W CCP1P00431 361 aa8.38□□□□□ -1.07
TFB4YPR056W SLA1P32790 1244 aa8.38□□□□□ -1.07
TFB4YPR056W UBP15P50101 1230 aa8.38□□□□□ -1.07
TFB4YPR056W NOP7P53261 605 aaKnown RBP8.38□□□□□ -1.07
TFB4YPR056W HPF1Q05164 967 aa8.38□□□□□ -1.07
TFB4YPR056W NAM8Q00539 523 aaKnown RBP8.37□□□□□ -1.07
TFB4YPR056W AIM9P40053 627 aaKnown RBP8.36□□□□□ -1.07
TFB4YPR056W AHP1P38013 176 aaKnown RBP8.35□□□□□ -1.07
TFB4YPR056W UTP7P40055 554 aaKnown RBP8.35□□□□□ -1.07
TFB4YPR056W LYS5P50113 272 aa8.35□□□□□ -1.07
TFB4YPR056W YPR204WQ08995 1032 aa8.35□□□□□ -1.07
TFB4YPR056W DPH6Q12429 685 aa8.35□□□□□ -1.07
TFB4YPR056W TRK2P28584 889 aa8.34□□□□□ -1.07
TFB4YPR056W TSC13Q99190 310 aa8.34□□□□□ -1.07
TFB4YPR056W SWI5P08153 709 aa8.33□□□□□ -1.08
TFB4YPR056W SNU71P53207 620 aaKnown RBP8.33□□□□□ -1.08
TFB4YPR056W YPQ2Q06328 317 aa8.32□□□□□ -1.08
TFB4YPR056W TY1A-DR3Q12441 440 aa8.32□□□□□ -1.08
TFB4YPR056W GEF1P37020 779 aa8.31□□□□□ -1.08
TFB4YPR056W ALA1P40825 983 aaKnown RBP8.31□□□□□ -1.08
TFB4YPR056W JJJ2P46997 583 aa8.31□□□□□ -1.08
TFB4YPR056W RPS6AP0CX37 236 aaKnown RBP8.3□□□□□ -1.08
TFB4YPR056W RPS6BP0CX38 236 aaPredicted RBP8.3□□□□□ -1.08
TFB4YPR056W SSA1P10591 642 aaKnown RBP8.29□□□□□ -1.08
TFB4YPR056W MCM1P11746 286 aa8.29□□□□□ -1.08
TFB4YPR056W CUZ1P53899 274 aa8.29□□□□□ -1.08
TFB4YPR056W IRE1P32361 1115 aa8.28□□□□□ -1.08
TFB4YPR056W NTH2P35172 780 aa8.28□□□□□ -1.08
TFB4YPR056W JJJ3P47138 172 aa8.28□□□□□ -1.08
TFB4YPR056W PDI1P17967 522 aaKnown RBP8.27□□□□□ -1.09
TFB4YPR056W PHO87P25360 923 aa8.27□□□□□ -1.09
TFB4YPR056W HAP4P14064 554 aa8.26□□□□□ -1.09
TFB4YPR056W DIT1P21623 536 aa8.26□□□□□ -1.09
TFB4YPR056W YDR461C-AQ2V2P7 80 aa8.25□□□□□ -1.09
TFB4YPR056W SHM1P37292 490 aaPredicted RBP8.24□□□□□ -1.09
TFB4YPR056W CEM1P39525 442 aa8.24□□□□□ -1.09
TFB4YPR056W YMR265CQ03508 461 aaKnown RBP8.24□□□□□ -1.09
TFB4YPR056W GAS4Q08271 471 aa8.24□□□□□ -1.09
TFB4YPR056W TTI1P36097 1038 aa8.23□□□□□ -1.09
TFB4YPR056W ACS2P52910 683 aaKnown RBP8.23□□□□□ -1.09
TFB4YPR056W CYT1P07143 309 aa8.22□□□□□ -1.09
TFB4YPR056W UBP1P25037 809 aa8.22□□□□□ -1.09
TFB4YPR056W RPS31P05759 152 aaKnown RBP8.21□□□□□ -1.1
TFB4YPR056W GAL2P13181 574 aa8.21□□□□□ -1.1
TFB4YPR056W PDC6P26263 563 aaKnown RBP8.21□□□□□ -1.1
TFB4YPR056W KTR7P40504 517 aa8.21□□□□□ -1.1
TFB4YPR056W SYT1Q06836 1226 aa8.21□□□□□ -1.1
TFB4YPR056W PSH1Q12161 406 aa8.21□□□□□ -1.1
TFB4YPR056W KRE33P53914 1056 aaKnown RBP8.19□□□□□ -1.1
TFB4YPR056W SUB2Q07478 446 aaKnown RBP8.19□□□□□ -1.1
TFB4YPR056W TGL4P36165 910 aa8.18□□□□□ -1.1
TFB4YPR056W LEU1P07264 779 aaKnown RBP8.17□□□□□ -1.1
TFB4YPR056W MET10P39692 1035 aa8.17□□□□□ -1.1
TFB4YPR056W YTA6P40328 754 aa8.16□□□□□ -1.1
TFB4YPR056W ADE12P80210 433 aaKnown RBP8.16□□□□□ -1.1
TFB4YPR056W UTP4Q06679 776 aaKnown RBP8.16□□□□□ -1.1
TFB4YPR056W RPP1AP05318 106 aaPredicted RBP8.15□□□□□ -1.1
TFB4YPR056W BRN1P38170 754 aa8.15□□□□□ -1.1
TFB4YPR056W ROM1P53046 1155 aa8.15□□□□□ -1.1
TFB4YPR056W NGR1P32831 672 aaKnown RBP8.14□□□□□ -1.11
TFB4YPR056W MRPL16P38064 232 aa8.14□□□□□ -1.11
TFB4YPR056W YNL165WP53891 406 aa8.14□□□□□ -1.11
TFB4YPR056W VAN1P23642 535 aa8.12□□□□□ -1.11
TFB4YPR056W FPS1P23900 669 aa8.12□□□□□ -1.11
TFB4YPR056W SLD2P34252 453 aa8.12□□□□□ -1.11
TFB4YPR056W SCD5P34758 872 aa8.12□□□□□ -1.11
TFB4YPR056W NUG1P40010 520 aaKnown RBP8.12□□□□□ -1.11
TFB4YPR056W ICP55P40051 511 aa8.12□□□□□ -1.11
TFB4YPR056W ALD2P47771 506 aa8.12□□□□□ -1.11
TFB4YPR056W Q0182Q9ZZW1 134 aa8.12□□□□□ -1.11
TFB4YPR056W PAM1P37304 830 aaKnown RBP8.11□□□□□ -1.11
TFB4YPR056W SPR3P41901 512 aa8.11□□□□□ -1.11
TFB4YPR056W PHM7Q12252 991 aa8.11□□□□□ -1.11
TFB4YPR056W STB3Q12427 513 aa8.11□□□□□ -1.11
TFB4YPR056W YTA7P40340 1379 aa8.1□□□□□ -1.11
TFB4YPR056W AI1P03875 834 aa8.1□□□□□ -1.11
TFB4YPR056W MLF3P32047 452 aa8.1□□□□□ -1.11
TFB4YPR056W ECM23Q02710 187 aa8.1□□□□□ -1.11
TFB4YPR056W TRS33Q99394 268 aa8.1□□□□□ -1.11
TFB4YPR056W RGP1P16664 663 aa8.09□□□□□ -1.11
TFB4YPR056W CPS1P27614 576 aa8.09□□□□□ -1.11
TFB4YPR056W HXT5P38695 592 aa8.09□□□□□ -1.11
TFB4YPR056W MTC5Q03897 1148 aa8.09□□□□□ -1.11
TFB4YPR056W PUP1P25043 261 aa8.08□□□□□ -1.12
TFB4YPR056W CWH41P53008 833 aa8.08□□□□□ -1.12
TFB4YPR056W SSA4P22202 642 aaKnown RBP8.07□□□□□ -1.12
TFB4YPR056W SWE1P32944 819 aa8.06□□□□□ -1.12
TFB4YPR056W GPM1P00950 247 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms