RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W TBS1P38114 1094 aa3.6□□□□□ -1.83
SGF11YPL047W GUA1P38625 525 aaKnown RBP3.6□□□□□ -1.83
SGF11YPL047W YCK2P23292 546 aaKnown RBP3.59□□□□□ -1.83
SGF11YPL047W SPT5P27692 1063 aaKnown RBP3.59□□□□□ -1.83
SGF11YPL047W YBL036CP38197 257 aa3.59□□□□□ -1.83
SGF11YPL047W HAL5P38970 855 aaKnown RBP3.59□□□□□ -1.83
SGF11YPL047W ALA1P40825 983 aaKnown RBP3.59□□□□□ -1.83
SGF11YPL047W APL6P46682 809 aa3.59□□□□□ -1.83
SGF11YPL047W GPM1P00950 247 aaKnown RBP3.58□□□□□ -1.84
SGF11YPL047W MCX1P38323 520 aaPredicted RBP3.58□□□□□ -1.84
SGF11YPL047W RPN1P38764 993 aaKnown RBP3.58□□□□□ -1.84
SGF11YPL047W BRL1P38770 471 aa3.58□□□□□ -1.84
SGF11YPL047W MCM16Q12262 181 aa3.58□□□□□ -1.84
SGF11YPL047W LEU3P08638 886 aa3.57□□□□□ -1.84
SGF11YPL047W YDJ1P25491 409 aaKnown RBP3.57□□□□□ -1.84
SGF11YPL047W SLN1P39928 1220 aaPredicted RBP3.57□□□□□ -1.84
SGF11YPL047W BOI2P39969 1040 aa3.57□□□□□ -1.84
SGF11YPL047W FPS1P23900 669 aa3.56□□□□□ -1.84
SGF11YPL047W IRE1P32361 1115 aa3.56□□□□□ -1.84
SGF11YPL047W SHM1P37292 490 aaPredicted RBP3.56□□□□□ -1.84
SGF11YPL047W ATG3P40344 310 aa3.56□□□□□ -1.84
SGF11YPL047W SUM1P46676 1062 aa3.56□□□□□ -1.84
SGF11YPL047W JJJ2P46997 583 aa3.56□□□□□ -1.84
SGF11YPL047W HPC2Q01448 625 aa3.56□□□□□ -1.84
SGF11YPL047W YDR215CQ12240 137 aa3.56□□□□□ -1.84
SGF11YPL047W AMN1P38285 549 aaPredicted RBP3.55□□□□□ -1.84
SGF11YPL047W YPP1P46951 817 aa3.55□□□□□ -1.84
SGF11YPL047W MCA1Q08601 432 aa3.55□□□□□ -1.84
SGF11YPL047W MRPL16P38064 232 aa3.54□□□□□ -1.84
SGF11YPL047W SOH1P38633 127 aa3.54□□□□□ -1.84
SGF11YPL047W SLX8P40072 274 aa3.54□□□□□ -1.84
SGF11YPL047W UTP13Q05946 817 aaKnown RBP3.54□□□□□ -1.84
SGF11YPL047W HDA3Q06623 655 aa3.54□□□□□ -1.84
SGF11YPL047W PSH1Q12161 406 aa3.54□□□□□ -1.84
SGF11YPL047W PDC6P26263 563 aaKnown RBP3.53□□□□□ -1.84
SGF11YPL047W TFB3Q03290 321 aa3.53□□□□□ -1.84
SGF11YPL047W STB3Q12427 513 aa3.53□□□□□ -1.84
SGF11YPL047W PDC5P16467 563 aaKnown RBP3.52□□□□□ -1.85
SGF11YPL047W LSB6P42951 607 aa3.52□□□□□ -1.85
SGF11YPL047W KNS1P32350 737 aaPredicted RBP3.51□□□□□ -1.85
SGF11YPL047W MET1P36150 593 aa3.51□□□□□ -1.85
SGF11YPL047W YNL108CP53929 270 aa3.51□□□□□ -1.85
SGF11YPL047W TY1A-DR2Q03964 440 aaKnown RBP3.51□□□□□ -1.85
SGF11YPL047W RPS31P05759 152 aaKnown RBP3.5□□□□□ -1.85
SGF11YPL047W PKC1P24583 1151 aa3.5□□□□□ -1.85
SGF11YPL047W TAT1P38085 619 aa3.5□□□□□ -1.85
SGF11YPL047W SPR3P41901 512 aa3.5□□□□□ -1.85
SGF11YPL047W PRY1P47032 299 aa3.5□□□□□ -1.85
SGF11YPL047W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SGF11YPL047W BIO2P32451 375 aa3.49□□□□□ -1.85
SGF11YPL047W ENO2P00925 437 aaKnown RBP3.48□□□□□ -1.85
SGF11YPL047W SUP45P12385 437 aaKnown RBP3.48□□□□□ -1.85
SGF11YPL047W YPQ2Q06328 317 aa3.48□□□□□ -1.85
SGF11YPL047W RPP1AP05318 106 aaPredicted RBP3.47□□□□□ -1.85
SGF11YPL047W SWI5P08153 709 aa3.47□□□□□ -1.85
SGF11YPL047W MAC1P35192 417 aa3.47□□□□□ -1.85
SGF11YPL047W MSC7P38694 644 aa3.47□□□□□ -1.85
SGF11YPL047W AIM9P40053 627 aaKnown RBP3.47□□□□□ -1.85
SGF11YPL047W ALD2P47771 506 aa3.47□□□□□ -1.85
SGF11YPL047W LEU1P07264 779 aaKnown RBP3.46□□□□□ -1.86
SGF11YPL047W YTA6P40328 754 aa3.46□□□□□ -1.86
SGF11YPL047W YFL034WP43564 1073 aa3.46□□□□□ -1.86
SGF11YPL047W YJL007CP47080 104 aa3.46□□□□□ -1.86
SGF11YPL047W YNL165WP53891 406 aa3.46□□□□□ -1.86
SGF11YPL047W ALO1P54783 526 aaKnown RBP3.46□□□□□ -1.86
SGF11YPL047W YPL034WQ03083 165 aa3.46□□□□□ -1.86
SGF11YPL047W RIM21P48565 533 aa3.45□□□□□ -1.86
SGF11YPL047W RPS6AP0CX37 236 aaKnown RBP3.44□□□□□ -1.86
SGF11YPL047W RPS6BP0CX38 236 aaPredicted RBP3.44□□□□□ -1.86
SGF11YPL047W RGP1P16664 663 aa3.43□□□□□ -1.86
SGF11YPL047W NTH2P35172 780 aa3.43□□□□□ -1.86
SGF11YPL047W MCM1P11746 286 aa3.42□□□□□ -1.86
SGF11YPL047W PDI1P17967 522 aaKnown RBP3.42□□□□□ -1.86
SGF11YPL047W RDS2P19541 446 aaKnown RBP3.42□□□□□ -1.86
SGF11YPL047W MLF3P32047 452 aa3.42□□□□□ -1.86
SGF11YPL047W PGM2P37012 569 aaKnown RBP3.42□□□□□ -1.86
SGF11YPL047W TPS3P38426 1054 aaKnown RBP3.42□□□□□ -1.86
SGF11YPL047W TSC13Q99190 310 aa3.42□□□□□ -1.86
SGF11YPL047W OMA1P36163 345 aa3.41□□□□□ -1.86
SGF11YPL047W ALG14P38242 237 aa3.41□□□□□ -1.86
SGF11YPL047W HGH1P48362 394 aaKnown RBP3.41□□□□□ -1.86
SGF11YPL047W BUD9P53226 547 aa3.41□□□□□ -1.86
SGF11YPL047W NHA1Q99271 985 aa3.41□□□□□ -1.86
SGF11YPL047W Q0182Q9ZZW1 134 aa3.41□□□□□ -1.86
SGF11YPL047W RTG2P32608 588 aaKnown RBP3.4□□□□□ -1.87
SGF11YPL047W PRK1P40494 810 aa3.4□□□□□ -1.87
SGF11YPL047W RPL34BP40525 121 aaKnown RBP3.4□□□□□ -1.87
SGF11YPL047W INP52P50942 1183 aa3.4□□□□□ -1.87
SGF11YPL047W ENO1P00924 437 aaKnown RBP3.39□□□□□ -1.87
SGF11YPL047W CYT1P07143 309 aa3.39□□□□□ -1.87
SGF11YPL047W TIF1P10081 395 aaKnown RBP3.39□□□□□ -1.87
SGF11YPL047W NAR1P23503 491 aaKnown RBP3.39□□□□□ -1.87
SGF11YPL047W BIM1P40013 344 aa3.39□□□□□ -1.87
SGF11YPL047W MTO1P53070 669 aa3.39□□□□□ -1.87
SGF11YPL047W HEH2Q03281 663 aa3.39□□□□□ -1.87
SGF11YPL047W MRX10Q05648 414 aa3.39□□□□□ -1.87
SGF11YPL047W GAS5Q08193 484 aa3.39□□□□□ -1.87
SGF11YPL047W NAB2P32505 525 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SGF11YPL047W NCL1P38205 684 aaKnown RBP3.37□□□□□ -1.87
SGF11YPL047W ATG32P40458 529 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms