RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C NAB2P32505 525 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
NIP1YMR309C TPS3P38426 1054 aaKnown RBP1.6□□□□□ -2.15
NIP1YMR309C PKH3Q03306 898 aaPredicted RBP1.6□□□□□ -2.15
NIP1YMR309C ARG8P18544 423 aa1.6□□□□□ -2.15
NIP1YMR309C AIM7Q12156 149 aa1.6□□□□□ -2.15
NIP1YMR309C RQC2Q12532 1038 aaKnown RBP1.6□□□□□ -2.15
NIP1YMR309C AHP1P38013 176 aaKnown RBP1.59□□□□□ -2.15
NIP1YMR309C TOS1P38288 455 aa1.59□□□□□ -2.15
NIP1YMR309C ISU1Q03020 165 aa1.59□□□□□ -2.15
NIP1YMR309C YCR015CP25616 317 aa1.59□□□□□ -2.16
NIP1YMR309C GUT2P32191 649 aa1.59□□□□□ -2.16
NIP1YMR309C GLC3P32775 704 aa1.59□□□□□ -2.16
NIP1YMR309C CSN12P47130 423 aa1.59□□□□□ -2.16
NIP1YMR309C MSN5P52918 1224 aa1.59□□□□□ -2.16
NIP1YMR309C SLA1P32790 1244 aa1.58□□□□□ -2.16
NIP1YMR309C KAE1P36132 386 aa1.58□□□□□ -2.16
NIP1YMR309C YKR073CP36153 106 aa1.58□□□□□ -2.16
NIP1YMR309C ATG20Q07528 640 aa1.58□□□□□ -2.16
NIP1YMR309C RAD59Q12223 238 aa1.58□□□□□ -2.16
NIP1YMR309C RNQ1P25367 405 aa1.58□□□□□ -2.16
NIP1YMR309C FRA1Q07825 749 aa1.58□□□□□ -2.16
NIP1YMR309C TRP3P00937 484 aa1.57□□□□□ -2.16
NIP1YMR309C MAK16P10962 306 aaPredicted RBP1.57□□□□□ -2.16
NIP1YMR309C PUB1P32588 453 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16 RIP-Chip
NIP1YMR309C SSN3P39073 555 aa1.57□□□□□ -2.16
NIP1YMR309C BUD9P53226 547 aa1.57□□□□□ -2.16
NIP1YMR309C SPT2P06843 333 aaPredicted RBP1.57□□□□□ -2.16
NIP1YMR309C APL6P46682 809 aa1.56□□□□□ -2.16
NIP1YMR309C MRX12P47084 519 aa1.56□□□□□ -2.16
NIP1YMR309C STE20Q03497 939 aaKnown RBP1.56□□□□□ -2.16
NIP1YMR309C BRE4Q07660 1125 aa1.56□□□□□ -2.16
NIP1YMR309C WTM2Q12206 467 aa1.56□□□□□ -2.16
NIP1YMR309C TY1A-DR3Q12441 440 aa1.56□□□□□ -2.16
NIP1YMR309C NHA1Q99271 985 aa1.56□□□□□ -2.16
NIP1YMR309C SSA2P10592 639 aaKnown RBP1.55□□□□□ -2.16
NIP1YMR309C PGM1P33401 570 aaKnown RBP1.55□□□□□ -2.16
NIP1YMR309C MRPL16P38064 232 aa1.55□□□□□ -2.16
NIP1YMR309C CTH1P47976 325 aa1.55□□□□□ -2.16
NIP1YMR309C SAC7P17121 654 aa1.54□□□□□ -2.16
NIP1YMR309C UTR2P32623 467 aa1.54□□□□□ -2.16
NIP1YMR309C CSE4P36012 229 aa1.54□□□□□ -2.16
NIP1YMR309C ALG14P38242 237 aa1.54□□□□□ -2.16
NIP1YMR309C TY1A-DR2Q03964 440 aaKnown RBP1.54□□□□□ -2.16
NIP1YMR309C STB3Q12427 513 aa1.54□□□□□ -2.16
NIP1YMR309C AI3P03877 415 aa1.54□□□□□ -2.16
NIP1YMR309C SPT5P27692 1063 aaKnown RBP1.54□□□□□ -2.16
NIP1YMR309C ALA1P40825 983 aaKnown RBP1.54□□□□□ -2.16
NIP1YMR309C SUM1P46676 1062 aa1.54□□□□□ -2.16
NIP1YMR309C JJJ2P46997 583 aa1.54□□□□□ -2.16
NIP1YMR309C ISR1Q06098 443 aaKnown RBP1.54□□□□□ -2.16
NIP1YMR309C DAT1P13483 248 aaKnown RBP1.53□□□□□ -2.16
NIP1YMR309C IRE1P32361 1115 aa1.53□□□□□ -2.16
NIP1YMR309C TBS1P38114 1094 aa1.53□□□□□ -2.16
NIP1YMR309C ESC8Q08119 714 aa1.53□□□□□ -2.16
NIP1YMR309C PGM2P37012 569 aaKnown RBP1.52□□□□□ -2.17
NIP1YMR309C SHM1P37292 490 aaPredicted RBP1.52□□□□□ -2.17
NIP1YMR309C SLX8P40072 274 aa1.52□□□□□ -2.17
NIP1YMR309C EMP47P43555 445 aa1.52□□□□□ -2.17
NIP1YMR309C UTP13Q05946 817 aaKnown RBP1.52□□□□□ -2.17
NIP1YMR309C MCM16Q12262 181 aa1.52□□□□□ -2.17
NIP1YMR309C YLR122CQ12312 125 aa1.52□□□□□ -2.17
NIP1YMR309C PDC6P26263 563 aaKnown RBP1.52□□□□□ -2.17
NIP1YMR309C YPT53P36019 220 aa1.52□□□□□ -2.17
NIP1YMR309C HAL5P38970 855 aaKnown RBP1.52□□□□□ -2.17
NIP1YMR309C UTP7P40055 554 aaKnown RBP1.52□□□□□ -2.17
NIP1YMR309C ARI1P53111 347 aaKnown RBP1.52□□□□□ -2.17
NIP1YMR309C YGR130CP53278 816 aa1.52□□□□□ -2.17
NIP1YMR309C PSH1Q12161 406 aa1.52□□□□□ -2.17
NIP1YMR309C RPS31P05759 152 aaKnown RBP1.51□□□□□ -2.17
NIP1YMR309C GIP4P39732 760 aa1.51□□□□□ -2.17
NIP1YMR309C SPR3P41901 512 aa1.51□□□□□ -2.17
NIP1YMR309C GAS5Q08193 484 aa1.51□□□□□ -2.17
NIP1YMR309C TAD3Q9URQ3 322 aa1.51□□□□□ -2.17
NIP1YMR309C RPP1AP05318 106 aaPredicted RBP1.51□□□□□ -2.17
NIP1YMR309C LEU1P07264 779 aaKnown RBP1.51□□□□□ -2.17
NIP1YMR309C ATG3P40344 310 aa1.51□□□□□ -2.17
NIP1YMR309C YPQ2Q06328 317 aa1.51□□□□□ -2.17
NIP1YMR309C KIN1P13185 1064 aa1.5□□□□□ -2.17
NIP1YMR309C CHS2P14180 963 aa1.5□□□□□ -2.17
NIP1YMR309C ISF1P32488 338 aa1.5□□□□□ -2.17
NIP1YMR309C MSC7P38694 644 aa1.5□□□□□ -2.17
NIP1YMR309C HPC2Q01448 625 aa1.5□□□□□ -2.17
NIP1YMR309C MAG2Q06436 670 aaKnown RBP1.5□□□□□ -2.17
NIP1YMR309C HDA3Q06623 655 aa1.5□□□□□ -2.17
NIP1YMR309C NIT1P40447 199 aa1.5□□□□□ -2.17
NIP1YMR309C YPP1P46951 817 aa1.5□□□□□ -2.17
NIP1YMR309C MCM1P11746 286 aa1.49□□□□□ -2.17
NIP1YMR309C SOH1P38633 127 aa1.49□□□□□ -2.17
NIP1YMR309C RRM3P38766 723 aa1.49□□□□□ -2.17
NIP1YMR309C ALD2P47771 506 aa1.49□□□□□ -2.17
NIP1YMR309C CYC7P00045 113 aa1.49□□□□□ -2.17
NIP1YMR309C RGP1P16664 663 aa1.49□□□□□ -2.17
NIP1YMR309C YDJ1P25491 409 aaKnown RBP1.49□□□□□ -2.17
NIP1YMR309C SEG2P34250 1132 aa1.49□□□□□ -2.17
NIP1YMR309C YBL036CP38197 257 aa1.49□□□□□ -2.17
NIP1YMR309C SWI5P08153 709 aa1.48□□□□□ -2.17
NIP1YMR309C GUA1P38625 525 aaKnown RBP1.48□□□□□ -2.17
NIP1YMR309C PRP43P53131 767 aaKnown RBP1.48□□□□□ -2.17
NIP1YMR309C HEH2Q03281 663 aa1.48□□□□□ -2.17
NIP1YMR309C SUP45P12385 437 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms