RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C ATG3P40344 310 aa6.5□□□□□ -1.37
SSO2YMR183C ATG32P40458 529 aa6.5□□□□□ -1.37
SSO2YMR183C SYT1Q06836 1226 aa6.5□□□□□ -1.37
SSO2YMR183C ISU1Q03020 165 aa6.49□□□□□ -1.37
SSO2YMR183C RIM21P48565 533 aa6.48□□□□□ -1.37
SSO2YMR183C TIF1P10081 395 aaKnown RBP6.47□□□□□ -1.37
SSO2YMR183C RPL34BP40525 121 aaKnown RBP6.47□□□□□ -1.37
SSO2YMR183C UTP13Q05946 817 aaKnown RBP6.47□□□□□ -1.37
SSO2YMR183C DAL1P32375 460 aa6.46□□□□□ -1.38
SSO2YMR183C YMR265CQ03508 461 aaKnown RBP6.46□□□□□ -1.38
SSO2YMR183C ISR1Q06098 443 aaKnown RBP6.46□□□□□ -1.38
SSO2YMR183C RPP2BP02400 110 aaKnown RBP6.45□□□□□ -1.38
SSO2YMR183C YCK2P23292 546 aaKnown RBP6.45□□□□□ -1.38
SSO2YMR183C DIT1P21623 536 aa6.44□□□□□ -1.38
SSO2YMR183C RTG2P32608 588 aaKnown RBP6.44□□□□□ -1.38
SSO2YMR183C MCX1P38323 520 aaPredicted RBP6.44□□□□□ -1.38
SSO2YMR183C SOH1P38633 127 aa6.44□□□□□ -1.38
SSO2YMR183C YNR014WP53719 212 aa6.44□□□□□ -1.38
SSO2YMR183C MRX10Q05648 414 aa6.44□□□□□ -1.38
SSO2YMR183C ENO1P00924 437 aaKnown RBP6.42□□□□□ -1.38
SSO2YMR183C SPT2P06843 333 aaPredicted RBP6.42□□□□□ -1.38
SSO2YMR183C RDS2P19541 446 aaKnown RBP6.42□□□□□ -1.38
SSO2YMR183C HAL5P38970 855 aaKnown RBP6.42□□□□□ -1.38
SSO2YMR183C AMN1P38285 549 aaPredicted RBP6.41□□□□□ -1.38
SSO2YMR183C KRE33P53914 1056 aaKnown RBP6.41□□□□□ -1.38
SSO2YMR183C YDR461C-AQ2V2P7 80 aa6.41□□□□□ -1.38
SSO2YMR183C UTR2P32623 467 aa6.4□□□□□ -1.38
SSO2YMR183C DLD3P39976 496 aaKnown RBP6.4□□□□□ -1.38
SSO2YMR183C WTM2Q12206 467 aa6.4□□□□□ -1.38
SSO2YMR183C DAT1P13483 248 aaKnown RBP6.39□□□□□ -1.39
SSO2YMR183C YDR215CQ12240 137 aa6.39□□□□□ -1.39
SSO2YMR183C SLN1P39928 1220 aaPredicted RBP6.38□□□□□ -1.39
SSO2YMR183C UBP15P50101 1230 aa6.38□□□□□ -1.39
SSO2YMR183C HDA3Q06623 655 aa6.38□□□□□ -1.39
SSO2YMR183C TBS1P38114 1094 aa6.37□□□□□ -1.39
SSO2YMR183C MCA1Q08601 432 aa6.37□□□□□ -1.39
SSO2YMR183C GLT1Q12680 2145 aaKnown RBP6.37□□□□□ -1.39
SSO2YMR183C PEP12P32854 288 aa6.36□□□□□ -1.39
SSO2YMR183C MAC1P35192 417 aa6.36□□□□□ -1.39
SSO2YMR183C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SSO2YMR183C LSB6P42951 607 aa6.35□□□□□ -1.39
SSO2YMR183C SIS2P36024 562 aa6.34□□□□□ -1.39
SSO2YMR183C BOI2P39969 1040 aa6.34□□□□□ -1.39
SSO2YMR183C SLX8P40072 274 aa6.34□□□□□ -1.39
SSO2YMR183C YFL034WP43564 1073 aa6.33□□□□□ -1.4
SSO2YMR183C GPM1P00950 247 aaKnown RBP6.32□□□□□ -1.4
SSO2YMR183C AIM9P40053 627 aaKnown RBP6.32□□□□□ -1.4
SSO2YMR183C MSN5P52918 1224 aa6.32□□□□□ -1.4
SSO2YMR183C SLA1P32790 1244 aa6.31□□□□□ -1.4
SSO2YMR183C SSN3P39073 555 aa6.31□□□□□ -1.4
SSO2YMR183C UTP7P40055 554 aaKnown RBP6.3□□□□□ -1.4
SSO2YMR183C SUM1P46676 1062 aa6.3□□□□□ -1.4
SSO2YMR183C TSC13Q99190 310 aa6.3□□□□□ -1.4
SSO2YMR183C SWI5P08153 709 aa6.29□□□□□ -1.4
SSO2YMR183C TTI1P36097 1038 aa6.29□□□□□ -1.4
SSO2YMR183C IRC24P40580 263 aa6.29□□□□□ -1.4
SSO2YMR183C TY1A-DR3Q12441 440 aa6.29□□□□□ -1.4
SSO2YMR183C KTR7P40504 517 aa6.28□□□□□ -1.4
SSO2YMR183C RPS6AP0CX37 236 aaKnown RBP6.27□□□□□ -1.41
SSO2YMR183C RPS6BP0CX38 236 aaPredicted RBP6.27□□□□□ -1.41
SSO2YMR183C PDI1P17967 522 aaKnown RBP6.27□□□□□ -1.41
SSO2YMR183C PHO87P25360 923 aa6.27□□□□□ -1.41
SSO2YMR183C NTH2P35172 780 aa6.27□□□□□ -1.41
SSO2YMR183C TAT1P38085 619 aa6.27□□□□□ -1.41
SSO2YMR183C AHP1P38013 176 aaKnown RBP6.26□□□□□ -1.41
SSO2YMR183C ALA1P40825 983 aaKnown RBP6.26□□□□□ -1.41
SSO2YMR183C HAP4P14064 554 aa6.25□□□□□ -1.41
SSO2YMR183C ACS2P52910 683 aaKnown RBP6.25□□□□□ -1.41
SSO2YMR183C YPQ2Q06328 317 aa6.25□□□□□ -1.41
SSO2YMR183C GAL2P13181 574 aa6.24□□□□□ -1.41
SSO2YMR183C TGL4P36165 910 aa6.24□□□□□ -1.41
SSO2YMR183C JJJ2P46997 583 aa6.24□□□□□ -1.41
SSO2YMR183C ALO1P54783 526 aaKnown RBP6.24□□□□□ -1.41
SSO2YMR183C CPS1P27614 576 aa6.23□□□□□ -1.41
SSO2YMR183C GAS4Q08271 471 aa6.23□□□□□ -1.41
SSO2YMR183C MCM1P11746 286 aa6.22□□□□□ -1.41
SSO2YMR183C MET1P36150 593 aa6.22□□□□□ -1.41
SSO2YMR183C YPL034WQ03083 165 aa6.22□□□□□ -1.41
SSO2YMR183C CYT1P07143 309 aa6.21□□□□□ -1.42
SSO2YMR183C IRE1P32361 1115 aa6.21□□□□□ -1.42
SSO2YMR183C RLF2Q12495 606 aa6.21□□□□□ -1.42
SSO2YMR183C FPS1P23900 669 aa6.2□□□□□ -1.42
SSO2YMR183C UBP1P25037 809 aa6.2□□□□□ -1.42
SSO2YMR183C SHM1P37292 490 aaPredicted RBP6.2□□□□□ -1.42
SSO2YMR183C PRY1P47032 299 aa6.19□□□□□ -1.42
SSO2YMR183C ROM1P53046 1155 aa6.19□□□□□ -1.42
SSO2YMR183C ECM23Q02710 187 aa6.19□□□□□ -1.42
SSO2YMR183C SSA4P22202 642 aaKnown RBP6.18□□□□□ -1.42
SSO2YMR183C PUP1P25043 261 aa6.17□□□□□ -1.42
SSO2YMR183C OMA1P36163 345 aa6.17□□□□□ -1.42
SSO2YMR183C INP52P50942 1183 aa6.17□□□□□ -1.42
SSO2YMR183C RPS31P05759 152 aaKnown RBP6.16□□□□□ -1.42
SSO2YMR183C PDC5P16467 563 aaKnown RBP6.16□□□□□ -1.42
SSO2YMR183C VAN1P23642 535 aa6.16□□□□□ -1.42
SSO2YMR183C PDC6P26263 563 aaKnown RBP6.16□□□□□ -1.42
SSO2YMR183C KNS1P32350 737 aaPredicted RBP6.16□□□□□ -1.42
SSO2YMR183C PSH1Q12161 406 aa6.16□□□□□ -1.42
SSO2YMR183C NGR1P32831 672 aaKnown RBP6.15□□□□□ -1.42
SSO2YMR183C UBX7P38349 436 aa6.14□□□□□ -1.43
SSO2YMR183C YNL165WP53891 406 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms