RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MVP1	YMR004W	FPS1	P23900	669 aa		4.26	□□□□□ -1.73
MVP1	YMR004W	TBS1	P38114	1094 aa		4.26	□□□□□ -1.73
MVP1	YMR004W	UTP7	P40055	554 aa	Known RBP	4.26	□□□□□ -1.73
MVP1	YMR004W	EMP47	P43555	445 aa		4.26	□□□□□ -1.73
MVP1	YMR004W	JJJ2	P46997	583 aa		4.26	□□□□□ -1.73
MVP1	YMR004W	IRE1	P32361	1115 aa		4.25	□□□□□ -1.73
MVP1	YMR004W	AMN1	P38285	549 aa	Predicted RBP	4.25	□□□□□ -1.73
MVP1	YMR004W	SLN1	P39928	1220 aa	Predicted RBP	4.25	□□□□□ -1.73
MVP1	YMR004W	ALA1	P40825	983 aa	Known RBP	4.25	□□□□□ -1.73
MVP1	YMR004W	SUM1	P46676	1062 aa		4.25	□□□□□ -1.73
MVP1	YMR004W	GLT1	Q12680	2145 aa	Known RBP	4.24	□□□□□ -1.73
MVP1	YMR004W	MET1	P36150	593 aa		4.24	□□□□□ -1.73
MVP1	YMR004W	HAL5	P38970	855 aa	Known RBP	4.24	□□□□□ -1.73
MVP1	YMR004W	KNS1	P32350	737 aa	Predicted RBP	4.23	□□□□□ -1.73
MVP1	YMR004W	ISF1	P32488	338 aa		4.23	□□□□□ -1.73
MVP1	YMR004W	CSE4	P36012	229 aa		4.23	□□□□□ -1.73
MVP1	YMR004W	SHM1	P37292	490 aa	Predicted RBP	4.23	□□□□□ -1.73
MVP1	YMR004W	LSB6	P42951	607 aa		4.23	□□□□□ -1.73
MVP1	YMR004W	MCM16	Q12262	181 aa		4.23	□□□□□ -1.73
MVP1	YMR004W	PDC5	P16467	563 aa	Known RBP	4.22	□□□□□ -1.73
MVP1	YMR004W	MRPL16	P38064	232 aa		4.22	□□□□□ -1.73
MVP1	YMR004W	MCA1	Q08601	432 aa		4.22	□□□□□ -1.73
MVP1	YMR004W	SPT5	P27692	1063 aa	Known RBP	4.21	□□□□□ -1.73
MVP1	YMR004W	SLX8	P40072	274 aa		4.21	□□□□□ -1.73
MVP1	YMR004W	PDC6	P26263	563 aa	Known RBP	4.21	□□□□□ -1.74
MVP1	YMR004W	PSH1	Q12161	406 aa		4.21	□□□□□ -1.74
MVP1	YMR004W	STB3	Q12427	513 aa		4.21	□□□□□ -1.74
MVP1	YMR004W	TAT1	P38085	619 aa		4.2	□□□□□ -1.74
MVP1	YMR004W	KIN1	P13185	1064 aa		4.19	□□□□□ -1.74
MVP1	YMR004W	SPR3	P41901	512 aa		4.19	□□□□□ -1.74
MVP1	YMR004W	TY1A-DR2	Q03964	440 aa	Known RBP	4.19	□□□□□ -1.74
MVP1	YMR004W	UTP13	Q05946	817 aa	Known RBP	4.18	□□□□□ -1.74
MVP1	YMR004W	HDA3	Q06623	655 aa		4.18	□□□□□ -1.74
MVP1	YMR004W	MAC1	P35192	417 aa		4.17	□□□□□ -1.74
MVP1	YMR004W	SOH1	P38633	127 aa		4.17	□□□□□ -1.74
MVP1	YMR004W	ATG3	P40344	310 aa		4.17	□□□□□ -1.74
MVP1	YMR004W	PRY1	P47032	299 aa		4.17	□□□□□ -1.74
MVP1	YMR004W	RPS31	P05759	152 aa	Known RBP	4.16	□□□□□ -1.74
MVP1	YMR004W	YDJ1	P25491	409 aa	Known RBP	4.16	□□□□□ -1.74
MVP1	YMR004W	YPL034W	Q03083	165 aa		4.16	□□□□□ -1.74
MVP1	YMR004W	LEU1	P07264	779 aa	Known RBP	4.15	□□□□□ -1.75
MVP1	YMR004W	YBL036C	P38197	257 aa		4.15	□□□□□ -1.75
MVP1	YMR004W	HPC2	Q01448	625 aa		4.15	□□□□□ -1.75
MVP1	YMR004W	YPQ2	Q06328	317 aa		4.15	□□□□□ -1.75
MVP1	YMR004W	RPP1A	P05318	106 aa	Predicted RBP	4.14	□□□□□ -1.75
MVP1	YMR004W	MSC7	P38694	644 aa		4.14	□□□□□ -1.75
MVP1	YMR004W	GUA1	P38625	525 aa	Known RBP	4.13	□□□□□ -1.75
MVP1	YMR004W	YPP1	P46951	817 aa		4.13	□□□□□ -1.75
MVP1	YMR004W	TPS3	P38426	1054 aa	Known RBP	4.12	□□□□□ -1.75
MVP1	YMR004W	ALD2	P47771	506 aa		4.12	□□□□□ -1.75
MVP1	YMR004W	ALO1	P54783	526 aa	Known RBP	4.12	□□□□□ -1.75
MVP1	YMR004W	SWI5	P08153	709 aa		4.11	□□□□□ -1.75
MVP1	YMR004W	TFB3	Q03290	321 aa		4.11	□□□□□ -1.75
MVP1	YMR004W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
MVP1	YMR004W	RGP1	P16664	663 aa		4.11	□□□□□ -1.75
MVP1	YMR004W	IRC24	P40580	263 aa		4.11	□□□□□ -1.75
MVP1	YMR004W	INP52	P50942	1183 aa		4.11	□□□□□ -1.75
MVP1	YMR004W	OMA1	P36163	345 aa		4.1	□□□□□ -1.75
MVP1	YMR004W	BUD9	P53226	547 aa		4.1	□□□□□ -1.75
MVP1	YMR004W	NHA1	Q99271	985 aa		4.1	□□□□□ -1.75
MVP1	YMR004W	MCM1	P11746	286 aa		4.09	□□□□□ -1.75
MVP1	YMR004W	YNL165W	P53891	406 aa		4.09	□□□□□ -1.75
MVP1	YMR004W	PGM2	P37012	569 aa	Known RBP	4.08	□□□□□ -1.76
MVP1	YMR004W	AIM9	P40053	627 aa	Known RBP	4.08	□□□□□ -1.76
MVP1	YMR004W	YTA6	P40328	754 aa		4.08	□□□□□ -1.76
MVP1	YMR004W	SUP45	P12385	437 aa	Known RBP	4.07	□□□□□ -1.76
MVP1	YMR004W	BIO2	P32451	375 aa		4.07	□□□□□ -1.76
MVP1	YMR004W	ALG14	P38242	237 aa		4.07	□□□□□ -1.76
MVP1	YMR004W	BRL1	P38770	471 aa		4.07	□□□□□ -1.76
MVP1	YMR004W	HEH2	Q03281	663 aa		4.06	□□□□□ -1.76
MVP1	YMR004W	ENO2	P00925	437 aa	Known RBP	4.05	□□□□□ -1.76
MVP1	YMR004W	LEU3	P08638	886 aa		4.05	□□□□□ -1.76
MVP1	YMR004W	RPS6A	P0CX37	236 aa	Known RBP	4.05	□□□□□ -1.76
MVP1	YMR004W	RPS6B	P0CX38	236 aa	Predicted RBP	4.05	□□□□□ -1.76
MVP1	YMR004W	PRK1	P40494	810 aa		4.05	□□□□□ -1.76
MVP1	YMR004W	AI3	P03877	415 aa		4.05	□□□□□ -1.76
MVP1	YMR004W	MLF3	P32047	452 aa		4.05	□□□□□ -1.76
MVP1	YMR004W	PGM1	P33401	570 aa	Known RBP	4.05	□□□□□ -1.76
MVP1	YMR004W	YFL034W	P43564	1073 aa		4.05	□□□□□ -1.76
MVP1	YMR004W	RDS2	P19541	446 aa	Known RBP	4.04	□□□□□ -1.76
MVP1	YMR004W	PKC1	P24583	1151 aa		4.04	□□□□□ -1.76
MVP1	YMR004W	RIM21	P48565	533 aa		4.04	□□□□□ -1.76
MVP1	YMR004W	YNL108C	P53929	270 aa		4.04	□□□□□ -1.76
MVP1	YMR004W	GIS4	Q04233	774 aa		4.04	□□□□□ -1.76
MVP1	YMR004W	NAR1	P23503	491 aa	Known RBP	4.03	□□□□□ -1.76
MVP1	YMR004W	NTH2	P35172	780 aa		4.03	□□□□□ -1.76
MVP1	YMR004W	Q0182	Q9ZZW1	134 aa		4.03	□□□□□ -1.76
MVP1	YMR004W	SAC7	P17121	654 aa		4.01	□□□□□ -1.77
MVP1	YMR004W	NCL1	P38205	684 aa	Known RBP	4.01	□□□□□ -1.77
MVP1	YMR004W	RPN1	P38764	993 aa	Known RBP	4.01	□□□□□ -1.77
MVP1	YMR004W	SKP1	P52286	194 aa		4.01	□□□□□ -1.77
MVP1	YMR004W	ARI1	P53111	347 aa	Known RBP	4.01	□□□□□ -1.77
MVP1	YMR004W	GAS5	Q08193	484 aa		4.01	□□□□□ -1.77
MVP1	YMR004W	AVT1	P47082	602 aa		4	□□□□□ -1.77
MVP1	YMR004W	RRM3	P38766	723 aa		4	□□□□□ -1.77
MVP1	YMR004W	MTO1	P53070	669 aa		4	□□□□□ -1.77
MVP1	YMR004W	PDI1	P17967	522 aa	Known RBP	3.99	□□□□□ -1.77
MVP1	YMR004W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
MVP1	YMR004W	SFA1	P32771	386 aa		3.99	□□□□□ -1.77
MVP1	YMR004W	CYT1	P07143	309 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms