RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C BOL3P39724 118 aa3.53□□□□□ -1.84
SGD1YLR336C AFT1P22149 690 aa3.53□□□□□ -1.84
SGD1YLR336C GAR1P28007 205 aaKnown RBP3.53□□□□□ -1.84
SGD1YLR336C TBS1P38114 1094 aa3.53□□□□□ -1.84
SGD1YLR336C UTP7P40055 554 aaKnown RBP3.53□□□□□ -1.84
SGD1YLR336C ALD4P46367 519 aaKnown RBP3.53□□□□□ -1.84
SGD1YLR336C SRS2P12954 1174 aa3.52□□□□□ -1.85
SGD1YLR336C UGA3P26370 528 aa3.52□□□□□ -1.85
SGD1YLR336C NGR1P32831 672 aaKnown RBP3.52□□□□□ -1.85
SGD1YLR336C MSB3P48566 633 aaPredicted RBP3.52□□□□□ -1.85
SGD1YLR336C YBL113CQ7M4S9 792 aa3.52□□□□□ -1.85
SGD1YLR336C TRL1P09880 827 aaKnown RBP3.52□□□□□ -1.85
SGD1YLR336C ERP5P38819 212 aa3.52□□□□□ -1.85
SGD1YLR336C YPL062WQ02781 134 aa3.52□□□□□ -1.85
SGD1YLR336C KAR5Q04746 504 aa3.52□□□□□ -1.85
SGD1YLR336C YPQ2Q06328 317 aa3.52□□□□□ -1.85
SGD1YLR336C TRS33Q99394 268 aa3.52□□□□□ -1.85
SGD1YLR336C HST3P53687 447 aa3.51□□□□□ -1.85
SGD1YLR336C GCR2Q01722 534 aa3.51□□□□□ -1.85
SGD1YLR336C BRE2P43132 505 aa3.51□□□□□ -1.85
SGD1YLR336C SEN54Q02825 467 aaPredicted RBP3.51□□□□□ -1.85
SGD1YLR336C SUM1P46676 1062 aa3.5□□□□□ -1.85
SGD1YLR336C YBR197CP38306 217 aa3.5□□□□□ -1.85
SGD1YLR336C AAD14P42884 376 aa3.5□□□□□ -1.85
SGD1YLR336C YJR115WP47152 169 aa3.5□□□□□ -1.85
SGD1YLR336C CAB1Q04430 367 aa3.5□□□□□ -1.85
SGD1YLR336C BOI1P38041 980 aaKnown RBP3.5□□□□□ -1.85
SGD1YLR336C DLD3P39976 496 aaKnown RBP3.5□□□□□ -1.85
SGD1YLR336C RTT106P40161 455 aa3.5□□□□□ -1.85
SGD1YLR336C MDJ2P42834 146 aa3.5□□□□□ -1.85
SGD1YLR336C PTK2P47116 818 aaKnown RBP3.5□□□□□ -1.85
SGD1YLR336C RPP2BP02400 110 aaKnown RBP3.49□□□□□ -1.85
SGD1YLR336C FUR4P05316 633 aaKnown RBP3.49□□□□□ -1.85
SGD1YLR336C HXT5P38695 592 aa3.49□□□□□ -1.85
SGD1YLR336C SSN3P39073 555 aa3.49□□□□□ -1.85
SGD1YLR336C YNL165WP53891 406 aa3.49□□□□□ -1.85
SGD1YLR336C DLD1P32891 587 aa3.49□□□□□ -1.85
SGD1YLR336C FOX2Q02207 900 aaKnown RBP3.49□□□□□ -1.85
SGD1YLR336C ARG82P07250 355 aa3.48□□□□□ -1.85
SGD1YLR336C GRS1P38088 690 aaKnown RBP3.48□□□□□ -1.85
SGD1YLR336C CWH41P53008 833 aa3.48□□□□□ -1.85
SGD1YLR336C ISC10P32645 267 aa3.48□□□□□ -1.85
SGD1YLR336C QDR1P40475 563 aa3.48□□□□□ -1.85
SGD1YLR336C LSO1Q3E827 93 aa3.48□□□□□ -1.85
SGD1YLR336C MCM1P11746 286 aa3.47□□□□□ -1.85
SGD1YLR336C GLO3P38682 493 aaKnown RBP3.47□□□□□ -1.85
SGD1YLR336C IPL1P38991 367 aa3.47□□□□□ -1.85
SGD1YLR336C ATG1P53104 897 aa3.47□□□□□ -1.85
SGD1YLR336C SLD2P34252 453 aa3.47□□□□□ -1.85
SGD1YLR336C SHM1P37292 490 aaPredicted RBP3.47□□□□□ -1.85
SGD1YLR336C YHL050CP38721 697 aa3.47□□□□□ -1.85
SGD1YLR336C YHR219WP38900 624 aa3.47□□□□□ -1.85
SGD1YLR336C ALA1P40825 983 aaKnown RBP3.47□□□□□ -1.85
SGD1YLR336C TY1A-DR3Q12441 440 aa3.47□□□□□ -1.85
SGD1YLR336C Q0182Q9ZZW1 134 aa3.47□□□□□ -1.85
SGD1YLR336C RRN6P32786 894 aa3.46□□□□□ -1.86
SGD1YLR336C KTR2P33550 425 aa3.46□□□□□ -1.86
SGD1YLR336C SRF1Q12516 437 aa3.46□□□□□ -1.86
SGD1YLR336C RPS31P05759 152 aaKnown RBP3.46□□□□□ -1.86
SGD1YLR336C JJJ2P46997 583 aa3.46□□□□□ -1.86
SGD1YLR336C YJR098CP47139 656 aa3.46□□□□□ -1.86
SGD1YLR336C MSN5P52918 1224 aa3.46□□□□□ -1.86
SGD1YLR336C MRPL33P20084 86 aa3.45□□□□□ -1.86
SGD1YLR336C RPB10P22139 70 aa3.45□□□□□ -1.86
SGD1YLR336C MLF3P32047 452 aa3.45□□□□□ -1.86
SGD1YLR336C SLA1P32790 1244 aa3.45□□□□□ -1.86
SGD1YLR336C STM1P39015 273 aaKnown RBP3.45□□□□□ -1.86
SGD1YLR336C FRT1Q99332 602 aa3.45□□□□□ -1.86
SGD1YLR336C NUP85P46673 744 aa3.45□□□□□ -1.86
SGD1YLR336C ACF4P47129 309 aa3.45□□□□□ -1.86
SGD1YLR336C MSC6Q08818 692 aaKnown RBP3.45□□□□□ -1.86
SGD1YLR336C APC11Q12157 165 aa3.45□□□□□ -1.86
SGD1YLR336C NUT2Q06213 157 aa3.44□□□□□ -1.86
SGD1YLR336C WHI5Q12416 295 aa3.44□□□□□ -1.86
SGD1YLR336C VMA3P25515 160 aa3.44□□□□□ -1.86
SGD1YLR336C DAL1P32375 460 aa3.44□□□□□ -1.86
SGD1YLR336C SCD5P34758 872 aa3.44□□□□□ -1.86
SGD1YLR336C IRE1P32361 1115 aa3.43□□□□□ -1.86
SGD1YLR336C TCB1Q12466 1186 aa3.43□□□□□ -1.86
SGD1YLR336C LSC2P53312 427 aa3.43□□□□□ -1.86
SGD1YLR336C HEM3P28789 327 aa3.42□□□□□ -1.86
SGD1YLR336C VTC4P47075 721 aa3.42□□□□□ -1.86
SGD1YLR336C SUT1P53032 299 aaKnown RBP3.42□□□□□ -1.86
SGD1YLR336C GPI13Q07830 1017 aa3.42□□□□□ -1.86
SGD1YLR336C AHP1P38013 176 aaKnown RBP3.42□□□□□ -1.86
SGD1YLR336C OPT2Q06593 877 aa3.42□□□□□ -1.86
SGD1YLR336C UTP4Q06679 776 aaKnown RBP3.42□□□□□ -1.86
SGD1YLR336C PSH1Q12161 406 aa3.42□□□□□ -1.86
SGD1YLR336C PDC6P26263 563 aaKnown RBP3.42□□□□□ -1.86
SGD1YLR336C MET22P32179 357 aa3.42□□□□□ -1.86
SGD1YLR336C QDR2P40474 542 aa3.42□□□□□ -1.86
SGD1YLR336C ALD2P47771 506 aa3.42□□□□□ -1.86
SGD1YLR336C MNL2Q12205 849 aa3.42□□□□□ -1.86
SGD1YLR336C SEC20P28791 383 aa3.41□□□□□ -1.86
SGD1YLR336C NAB2P32505 525 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SGD1YLR336C PPX1P38698 397 aa3.41□□□□□ -1.86
SGD1YLR336C TRS120Q04183 1289 aa3.41□□□□□ -1.86
SGD1YLR336C ATE1P16639 503 aa3.41□□□□□ -1.86
SGD1YLR336C MET4P32389 672 aa3.4□□□□□ -1.86
SGD1YLR336C HXT8P40886 569 aa3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms