RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeastyeast

Gene TFS1, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFS1YLR178C CLB5P30283 435 aa7.09□□□□□ -1.27
TFS1YLR178C FRK1Q03002 865 aaPredicted RBP7.09□□□□□ -1.27
TFS1YLR178C CSC1Q06538 782 aa7.09□□□□□ -1.27
TFS1YLR178C ATG13Q06628 738 aa7.09□□□□□ -1.27
TFS1YLR178C YBL029C-AQ3E756 94 aa7.09□□□□□ -1.27
TFS1YLR178C YRF1-3P0CX14 1859 aa7.09□□□□□ -1.28
TFS1YLR178C YRF1-7P0CX15 1859 aa7.09□□□□□ -1.28
TFS1YLR178C YRF1-6P53819 1859 aa7.09□□□□□ -1.28
TFS1YLR178C SIR4P11978 1358 aa7.08□□□□□ -1.28
TFS1YLR178C AUS1Q08409 1394 aa7.08□□□□□ -1.28
TFS1YLR178C RPP1BP10622 106 aaKnown RBP7.08□□□□□ -1.28
TFS1YLR178C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
TFS1YLR178C VNX1P42839 908 aa7.08□□□□□ -1.28
TFS1YLR178C CDC73Q06697 393 aa7.08□□□□□ -1.28
TFS1YLR178C TYW1Q08960 810 aaKnown RBP7.08□□□□□ -1.28
TFS1YLR178C RPO41P13433 1351 aaKnown RBP7.08□□□□□ -1.28
TFS1YLR178C UGA2P38067 497 aa7.07□□□□□ -1.28
TFS1YLR178C YBL086CP38177 466 aa7.07□□□□□ -1.28
TFS1YLR178C ALD2P47771 506 aa7.07□□□□□ -1.28
TFS1YLR178C JIP4Q03361 876 aa7.07□□□□□ -1.28
TFS1YLR178C YPR109WQ06104 294 aa7.07□□□□□ -1.28
TFS1YLR178C ULI1P43604 169 aa7.06□□□□□ -1.28
TFS1YLR178C NIS1P53939 407 aa7.06□□□□□ -1.28
TFS1YLR178C ADE16P54113 591 aaKnown RBP7.06□□□□□ -1.28
TFS1YLR178C SNF2P22082 1703 aa7.06□□□□□ -1.28
TFS1YLR178C HSP104P31539 908 aaKnown RBP7.05□□□□□ -1.28
TFS1YLR178C YKR075CP36155 307 aa7.05□□□□□ -1.28
TFS1YLR178C NPR2P39923 615 aa7.05□□□□□ -1.28
TFS1YLR178C LYS4P49367 693 aaPredicted RBP7.05□□□□□ -1.28
TFS1YLR178C TIF11P38912 153 aaKnown RBP7.04□□□□□ -1.28
TFS1YLR178C FPK1P53739 893 aa7.04□□□□□ -1.28
TFS1YLR178C TFB4Q12004 338 aa7.04□□□□□ -1.28
TFS1YLR178C TRK1P12685 1235 aa7.03□□□□□ -1.28
TFS1YLR178C BIM1P40013 344 aa7.03□□□□□ -1.28
TFS1YLR178C YJL007CP47080 104 aa7.03□□□□□ -1.28
TFS1YLR178C HST2P53686 357 aa7.03□□□□□ -1.28
TFS1YLR178C SPT7P35177 1332 aa7.02□□□□□ -1.28
TFS1YLR178C AKL1P38080 1108 aaKnown RBP7.02□□□□□ -1.29
TFS1YLR178C DSD1P53095 428 aa7.02□□□□□ -1.29
TFS1YLR178C YBP2P53169 641 aa7.02□□□□□ -1.29
TFS1YLR178C PEX21P50091 288 aa7.01□□□□□ -1.29
TFS1YLR178C CTF4Q01454 927 aa7.01□□□□□ -1.29
TFS1YLR178C SPP1Q03012 353 aa7.01□□□□□ -1.29
TFS1YLR178C AOS1Q06624 347 aa7.01□□□□□ -1.29
TFS1YLR178C INP54Q08227 384 aaKnown RBP7.01□□□□□ -1.29
TFS1YLR178C IOC2Q12072 812 aa7.01□□□□□ -1.29
TFS1YLR178C OSM1P21375 501 aaKnown RBP7□□□□□ -1.29
TFS1YLR178C SCJ1P25303 377 aa7□□□□□ -1.29
TFS1YLR178C GRX1P25373 110 aaKnown RBP7□□□□□ -1.29
TFS1YLR178C MID1P41821 548 aa7□□□□□ -1.29
TFS1YLR178C TUM1Q08686 304 aaKnown RBP7□□□□□ -1.29
TFS1YLR178C MMP1Q12372 583 aa7□□□□□ -1.29
TFS1YLR178C ATG32P40458 529 aa6.99□□□□□ -1.29
TFS1YLR178C YNL035CP53962 389 aaKnown RBP6.99□□□□□ -1.29
TFS1YLR178C ALD3P54114 506 aa6.99□□□□□ -1.29
TFS1YLR178C PML39Q03760 334 aa6.99□□□□□ -1.29
TFS1YLR178C DPL1Q05567 589 aa6.99□□□□□ -1.29
TFS1YLR178C BUG1Q12191 341 aa6.99□□□□□ -1.29
TFS1YLR178C RIM15P43565 1770 aa6.99□□□□□ -1.29
TFS1YLR178C SIT4P20604 311 aa6.98□□□□□ -1.29
TFS1YLR178C ESS1P22696 170 aa6.98□□□□□ -1.29
TFS1YLR178C RTR1P40084 226 aaPredicted RBP6.98□□□□□ -1.29
TFS1YLR178C YBL036CP38197 257 aa6.97□□□□□ -1.29
TFS1YLR178C UBP9P39967 754 aa6.97□□□□□ -1.29
TFS1YLR178C PKH3Q03306 898 aaPredicted RBP6.97□□□□□ -1.29
TFS1YLR178C MPC54Q08550 464 aa6.97□□□□□ -1.29
TFS1YLR178C NUP145P49687 1317 aa6.97□□□□□ -1.29
TFS1YLR178C KCC4P25389 1037 aa6.96□□□□□ -1.3
TFS1YLR178C CTH1P47976 325 aa6.96□□□□□ -1.3
TFS1YLR178C RMT2Q03305 412 aa6.96□□□□□ -1.3
TFS1YLR178C RAD59Q12223 238 aa6.96□□□□□ -1.3
TFS1YLR178C RAD4P14736 754 aa6.95□□□□□ -1.3
TFS1YLR178C YRR1Q12172 810 aa6.95□□□□□ -1.3
TFS1YLR178C YJU3P28321 313 aa6.94□□□□□ -1.3
TFS1YLR178C RTG1P32607 177 aa6.93□□□□□ -1.3
TFS1YLR178C NTH2P35172 780 aa6.93□□□□□ -1.3
TFS1YLR178C UTP22P53254 1237 aaPredicted RBP6.93□□□□□ -1.3
TFS1YLR178C NSE3Q05541 303 aa6.93□□□□□ -1.3
TFS1YLR178C ALE1Q08548 619 aa6.93□□□□□ -1.3
TFS1YLR178C ISU2Q12056 156 aa6.93□□□□□ -1.3
TFS1YLR178C TIF1P10081 395 aaKnown RBP6.92□□□□□ -1.3
TFS1YLR178C UGA3P26370 528 aa6.92□□□□□ -1.3
TFS1YLR178C BIO2P32451 375 aa6.92□□□□□ -1.3
TFS1YLR178C RPL34BP40525 121 aaKnown RBP6.92□□□□□ -1.3
TFS1YLR178C SAP155P43612 1002 aa6.92□□□□□ -1.3
TFS1YLR178C RRP46P53256 223 aaPredicted RBP6.92□□□□□ -1.3
TFS1YLR178C PEX29Q03370 554 aa6.92□□□□□ -1.3
TFS1YLR178C LDB19Q12502 818 aa6.92□□□□□ -1.3
TFS1YLR178C ERG12P07277 443 aa6.91□□□□□ -1.3
TFS1YLR178C ARG8P18544 423 aa6.91□□□□□ -1.3
TFS1YLR178C PRD1P25375 712 aa6.91□□□□□ -1.3
TFS1YLR178C SEC61P32915 480 aa6.91□□□□□ -1.3
TFS1YLR178C RRT14P40470 206 aa6.91□□□□□ -1.3
TFS1YLR178C BUD27P43573 796 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
TFS1YLR178C ZDS1P50111 915 aaKnown RBP6.91□□□□□ -1.3
TFS1YLR178C MDG1P53885 366 aa6.91□□□□□ -1.3
TFS1YLR178C NMA111P53920 997 aa6.91□□□□□ -1.3
TFS1YLR178C YNL050CP53952 270 aa6.91□□□□□ -1.3
TFS1YLR178C SLY41P22215 453 aa6.9□□□□□ -1.3
TFS1YLR178C SUB2Q07478 446 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms