RNA–Protein interactions for RNA: YLL029W

FRA1, Transcript of Protein involved in negative regulation of iron regulon transcription, yeastyeast

Gene FRA1, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRA1YLL029W ELA1P53861 379 aaPredicted RBP9.4□□□□□ -0.9
FRA1YLL029W RIA1P53893 1110 aa9.4□□□□□ -0.9
FRA1YLL029W RRP15Q06511 250 aaPredicted RBP9.4□□□□□ -0.9
FRA1YLL029W AVO1Q08236 1176 aa9.4□□□□□ -0.9
FRA1YLL029W NPL4P33755 580 aa9.4□□□□□ -0.9
FRA1YLL029W SVL3Q03088 825 aaKnown RBP9.4□□□□□ -0.9
FRA1YLL029W NKP1Q12493 238 aa9.4□□□□□ -0.9
FRA1YLL029W MPH3P0CE00 602 aa9.39□□□□□ -0.91
FRA1YLL029W SEC6P32844 805 aa9.39□□□□□ -0.91
FRA1YLL029W TIM11P81449 96 aaPredicted RBP9.39□□□□□ -0.91
FRA1YLL029W YHR218WP38899 603 aa9.39□□□□□ -0.91
FRA1YLL029W PEX5P35056 612 aa9.38□□□□□ -0.91
FRA1YLL029W ALD2P47771 506 aa9.38□□□□□ -0.91
FRA1YLL029W SRP1Q02821 542 aaKnown RBP9.38□□□□□ -0.91
FRA1YLL029W RRB1Q04225 511 aaKnown RBP9.38□□□□□ -0.91
FRA1YLL029W BRF1P29056 596 aa9.38□□□□□ -0.91
FRA1YLL029W RNH70P53331 553 aa9.38□□□□□ -0.91
FRA1YLL029W MET1P36150 593 aa9.37□□□□□ -0.91
FRA1YLL029W CYB2P00175 591 aa9.36□□□□□ -0.91
FRA1YLL029W SWI3P32591 825 aa9.36□□□□□ -0.91
FRA1YLL029W OPY1P38271 328 aa9.36□□□□□ -0.91
FRA1YLL029W PHM6Q05637 104 aa9.36□□□□□ -0.91
FRA1YLL029W RRP9Q06506 573 aaKnown RBP9.36□□□□□ -0.91
FRA1YLL029W RUD3Q12234 484 aaKnown RBP9.36□□□□□ -0.91
FRA1YLL029W KAR1P11927 433 aa9.36□□□□□ -0.91
FRA1YLL029W CDC31P06704 161 aaKnown RBP9.35□□□□□ -0.91
FRA1YLL029W GLE1Q12315 538 aa9.35□□□□□ -0.91
FRA1YLL029W YVC1Q12324 675 aa9.35□□□□□ -0.91
FRA1YLL029W MAK10Q02197 733 aa9.35□□□□□ -0.91
FRA1YLL029W SSB1P11484 613 aaKnown RBP9.34□□□□□ -0.91
FRA1YLL029W YAP3P38749 330 aa9.34□□□□□ -0.91
FRA1YLL029W SSB2P40150 613 aaKnown RBP9.34□□□□□ -0.91
FRA1YLL029W RTT106P40161 455 aa9.34□□□□□ -0.91
FRA1YLL029W OCA1P50946 238 aaPredicted RBP9.34□□□□□ -0.91
FRA1YLL029W NSE3Q05541 303 aa9.34□□□□□ -0.91
FRA1YLL029W RPL17BP46990 184 aaKnown RBP9.34□□□□□ -0.91
FRA1YLL029W GYP7P48365 746 aa9.34□□□□□ -0.91
FRA1YLL029W NOP14Q99207 810 aaKnown RBP9.34□□□□□ -0.91
FRA1YLL029W CTR9P89105 1077 aa9.33□□□□□ -0.92
FRA1YLL029W YOR389WQ08912 624 aa9.33□□□□□ -0.92
FRA1YLL029W ESL2P36168 1195 aa9.33□□□□□ -0.92
FRA1YLL029W KEL2P50090 882 aa9.33□□□□□ -0.92
FRA1YLL029W DBP10Q12389 995 aaKnown RBP9.33□□□□□ -0.92
FRA1YLL029W BNR1P40450 1375 aa9.32□□□□□ -0.92
FRA1YLL029W HGH1P48362 394 aaKnown RBP9.32□□□□□ -0.92
FRA1YLL029W YNL247WP53852 767 aaKnown RBP9.32□□□□□ -0.92
FRA1YLL029W SEC7P11075 2009 aaKnown RBP9.32□□□□□ -0.92
FRA1YLL029W HEM3P28789 327 aa9.31□□□□□ -0.92
FRA1YLL029W RPN12P32496 274 aa9.31□□□□□ -0.92
FRA1YLL029W RTG2P32608 588 aaKnown RBP9.31□□□□□ -0.92
FRA1YLL029W ARC19P33204 171 aaKnown RBP9.31□□□□□ -0.92
FRA1YLL029W SEN54Q02825 467 aaPredicted RBP9.31□□□□□ -0.92
FRA1YLL029W ERV41Q04651 352 aa9.31□□□□□ -0.92
FRA1YLL029W VTI1Q04338 217 aa9.31□□□□□ -0.92
FRA1YLL029W PCL8Q08966 492 aa9.31□□□□□ -0.92
FRA1YLL029W MAK16P10962 306 aaPredicted RBP9.3□□□□□ -0.92
FRA1YLL029W UGA3P26370 528 aa9.3□□□□□ -0.92
FRA1YLL029W VMA1P17255 1071 aaKnown RBP9.3□□□□□ -0.92
FRA1YLL029W SIT4P20604 311 aa9.3□□□□□ -0.92
FRA1YLL029W REX2P54964 269 aaKnown RBP9.3□□□□□ -0.92
FRA1YLL029W APC2Q12440 853 aa9.3□□□□□ -0.92
FRA1YLL029W PHO87P25360 923 aa9.29□□□□□ -0.92
FRA1YLL029W NNF1P47149 201 aa9.29□□□□□ -0.92
FRA1YLL029W CCM1P48237 864 aaPredicted RBP9.29□□□□□ -0.92
FRA1YLL029W SPO71Q03868 1245 aa9.29□□□□□ -0.92
FRA1YLL029W SEC23P15303 768 aaKnown RBP9.29□□□□□ -0.92
FRA1YLL029W KDX1P36005 433 aa9.29□□□□□ -0.92
FRA1YLL029W RKM3P38222 552 aa9.29□□□□□ -0.92
FRA1YLL029W LSP1Q12230 341 aaKnown RBP9.29□□□□□ -0.92
FRA1YLL029W LAM1P38851 1228 aa9.28□□□□□ -0.92
FRA1YLL029W STM1P39015 273 aaKnown RBP9.28□□□□□ -0.92
FRA1YLL029W OYE2Q03558 400 aaKnown RBP9.28□□□□□ -0.92
FRA1YLL029W PUF6Q04373 656 aaKnown RBP9.28□□□□□ -0.92
FRA1YLL029W CLP1Q08685 445 aaPredicted RBP9.28□□□□□ -0.92
FRA1YLL029W YEF3P16521 1044 aaKnown RBP9.28□□□□□ -0.92
FRA1YLL029W SSD1P24276 1250 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
FRA1YLL029W GCD6P32501 712 aaKnown RBP9.28□□□□□ -0.92
FRA1YLL029W FUI1P38196 639 aa9.27□□□□□ -0.93
FRA1YLL029W TFG1P41895 735 aaPredicted RBP9.27□□□□□ -0.93
FRA1YLL029W TY1B-NL2Q99337 1749 aaKnown RBP9.27□□□□□ -0.93
FRA1YLL029W TFC3P34111 1160 aa9.26□□□□□ -0.93
FRA1YLL029W SMD2Q06217 110 aaKnown RBP9.26□□□□□ -0.93
FRA1YLL029W IRC3Q06683 689 aa9.26□□□□□ -0.93
FRA1YLL029W TCB1Q12466 1186 aa9.26□□□□□ -0.93
FRA1YLL029W GLN1P32288 370 aaKnown RBP9.26□□□□□ -0.93
FRA1YLL029W RPC37P36121 282 aa9.26□□□□□ -0.93
FRA1YLL029W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
FRA1YLL029W RAD17P48581 401 aa9.25□□□□□ -0.93
FRA1YLL029W PAF1P38351 445 aa9.24□□□□□ -0.93
FRA1YLL029W RAD26P40352 1085 aa9.24□□□□□ -0.93
FRA1YLL029W JJJ1P53863 590 aa9.24□□□□□ -0.93
FRA1YLL029W COG8Q04632 607 aa9.24□□□□□ -0.93
FRA1YLL029W TRS33Q99394 268 aa9.24□□□□□ -0.93
FRA1YLL029W PAP2P53632 584 aaKnown RBP9.24□□□□□ -0.93
FRA1YLL029W TRX2P22803 104 aaKnown RBP9.23□□□□□ -0.93
FRA1YLL029W ANP1P32629 500 aa9.23□□□□□ -0.93
FRA1YLL029W NIP100P33420 868 aa9.23□□□□□ -0.93
FRA1YLL029W SAS3P34218 831 aa9.23□□□□□ -0.93
FRA1YLL029W ARR1Q06596 294 aa9.23□□□□□ -0.93
FRA1YLL029W ATG19P35193 415 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms